RNA–Protein interactions for RNA: ENST00000540975.5

YBX3-210, Transcript of Y-box binding protein 3, humanhuman

TSL 3

Gene YBX3, Length 677 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-210ENST00000540975 CTNSO60931 367 aa3.52□□□□□ -1.85
YBX3-210ENST00000540975 MED6O75586 246 aa3.52□□□□□ -1.85
YBX3-210ENST00000540975 BRI3O95415 125 aa3.52□□□□□ -1.85
YBX3-210ENST00000540975 IGKV2D-28P01615 120 aa3.52□□□□□ -1.85
YBX3-210ENST00000540975 CRHP06850 196 aa3.52□□□□□ -1.85
YBX3-210ENST00000540975 GUSBP08236 651 aa3.52□□□□□ -1.85
YBX3-210ENST00000540975 SLC2A1P11166 492 aa3.52□□□□□ -1.85
YBX3-210ENST00000540975 ETS2P15036 469 aa3.52□□□□□ -1.85
YBX3-210ENST00000540975 ZNF7P17097 686 aaPredicted RBP3.52□□□□□ -1.85
YBX3-210ENST00000540975 F8A1P23610 371 aa3.52□□□□□ -1.85
YBX3-210ENST00000540975 CXCR2P25025 360 aa3.52□□□□□ -1.85
YBX3-210ENST00000540975 MPIP34949 423 aa3.52□□□□□ -1.85
YBX3-210ENST00000540975 FDFT1P37268 417 aa3.52□□□□□ -1.85
YBX3-210ENST00000540975 HSPA9P38646 679 aaKnown RBP3.52□□□□□ -1.85
YBX3-210ENST00000540975 EIF1P41567 113 aaKnown RBP3.52□□□□□ -1.85
YBX3-210ENST00000540975 NAMPTP43490 491 aa3.52□□□□□ -1.85
YBX3-210ENST00000540975 KCNJ3P48549 501 aa3.52□□□□□ -1.85
YBX3-210ENST00000540975 ARRB1P49407 418 aaPredicted RBP3.52□□□□□ -1.85
YBX3-210ENST00000540975 EIF2B2P49770 351 aaKnown RBP3.52□□□□□ -1.85
YBX3-210ENST00000540975 PKNOX1P55347 436 aa3.52□□□□□ -1.85
YBX3-210ENST00000540975 ARF6P62330 175 aa3.52□□□□□ -1.85
YBX3-210ENST00000540975 RAB11AP62491 216 aa3.52□□□□□ -1.85
YBX3-210ENST00000540975 RPL23AP62750 156 aaKnown RBP3.52□□□□□ -1.85
YBX3-210ENST00000540975 RPS15P62841 145 aaKnown RBP3.52□□□□□ -1.85
YBX3-210ENST00000540975 PAX5Q02548 391 aa3.52□□□□□ -1.85
YBX3-210ENST00000540975 RAB11BQ15907 218 aa3.52□□□□□ -1.85
YBX3-210ENST00000540975 SLC15A2Q16348 729 aa3.52□□□□□ -1.85
YBX3-210ENST00000540975 GPR107Q5VW38 600 aa3.52□□□□□ -1.85
YBX3-210ENST00000540975 ZFP1Q6P2D0 407 aa3.52□□□□□ -1.85
YBX3-210ENST00000540975 FAM151BQ6UXP7 276 aa3.52□□□□□ -1.85
YBX3-210ENST00000540975 KRTAP5-2Q701N4 177 aa3.52□□□□□ -1.85
YBX3-210ENST00000540975 SLC35D2Q76EJ3 337 aa3.52□□□□□ -1.85
YBX3-210ENST00000540975 EIF3MQ7L2H7 374 aaKnown RBP3.52□□□□□ -1.85
YBX3-210ENST00000540975 LUZP2Q86TE4 346 aa3.52□□□□□ -1.85
YBX3-210ENST00000540975 RBM45Q8IUH3 476 aaKnown RBP3.52□□□□□ -1.85
YBX3-210ENST00000540975 IFT20Q8IY31 132 aa3.52□□□□□ -1.85
YBX3-210ENST00000540975 NKAPP1Q8N9T2 125 aa3.52□□□□□ -1.85
YBX3-210ENST00000540975 CHCHD10Q8WYQ3 142 aaPredicted RBP3.52□□□□□ -1.85
YBX3-210ENST00000540975 C22orf15Q8WYQ4 148 aa3.52□□□□□ -1.85
YBX3-210ENST00000540975 MAFIPQ8WZ33 124 aa3.52□□□□□ -1.85
YBX3-210ENST00000540975 PIGCQ92535 297 aa3.52□□□□□ -1.85
YBX3-210ENST00000540975 MYLPFQ96A32 169 aa3.52□□□□□ -1.85
YBX3-210ENST00000540975 S100PBPQ96BU1 408 aa3.52□□□□□ -1.85
YBX3-210ENST00000540975 TLCD1Q96CP7 247 aa3.52□□□□□ -1.85
YBX3-210ENST00000540975 ECHDC3Q96DC8 303 aa3.52□□□□□ -1.85
YBX3-210ENST00000540975 SGTBQ96EQ0 304 aa3.52□□□□□ -1.85
YBX3-210ENST00000540975 PDXPQ96GD0 296 aa3.52□□□□□ -1.85
YBX3-210ENST00000540975 XPO6Q96QU8 1125 aaKnown RBP3.52□□□□□ -1.85
YBX3-210ENST00000540975 RASL11BQ9BPW5 248 aa3.52□□□□□ -1.85
YBX3-210ENST00000540975 C7orf50Q9BRJ6 194 aaKnown RBP3.52□□□□□ -1.85
YBX3-210ENST00000540975 COPS4Q9BT78 406 aa3.52□□□□□ -1.85
YBX3-210ENST00000540975 TEKT3Q9BXF9 490 aa3.52□□□□□ -1.85
YBX3-210ENST00000540975 GSDMCQ9BYG8 508 aa3.52□□□□□ -1.85
YBX3-210ENST00000540975 SLC17A9Q9BYT1 436 aa3.52□□□□□ -1.85
YBX3-210ENST00000540975 RAB1BQ9H0U4 201 aa3.52□□□□□ -1.85
YBX3-210ENST00000540975 TMEM185BQ9H7F4 350 aa3.52□□□□□ -1.85
YBX3-210ENST00000540975 GEMIN7Q9H840 131 aaKnown RBP3.52□□□□□ -1.85
YBX3-210ENST00000540975 MCCC2Q9HCC0 563 aa3.52□□□□□ -1.85
YBX3-210ENST00000540975 ZFP14Q9HCL3 533 aa3.52□□□□□ -1.85
YBX3-210ENST00000540975 CSNK1G1Q9HCP0 422 aa3.52□□□□□ -1.85
YBX3-210ENST00000540975 MRPL22Q9NWU5 206 aaKnown RBP3.52□□□□□ -1.85
YBX3-210ENST00000540975 TREM2Q9NZC2 230 aa3.52□□□□□ -1.85
YBX3-210ENST00000540975 SLC17A7Q9P2U7 560 aa3.52□□□□□ -1.85
YBX3-210ENST00000540975 WIF1Q9Y5W5 379 aa3.52□□□□□ -1.85
YBX3-210ENST00000540975 CHD1O14646 1710 aa3.52□□□□□ -1.85
YBX3-210ENST00000540975 CD163L1Q9NR16 1453 aa3.52□□□□□ -1.85
YBX3-210ENST00000540975 PQLC2LA1A4F0 135 aa3.51□□□□□ -1.85
YBX3-210ENST00000540975 KLRC4-KLRK1H3BQV0 150 aa3.51□□□□□ -1.85
YBX3-210ENST00000540975 CCRL2O00421 344 aa3.51□□□□□ -1.85
YBX3-210ENST00000540975 NBR2O15453 112 aa3.51□□□□□ -1.85
YBX3-210ENST00000540975 ZNF208O43345 1280 aa3.51□□□□□ -1.85
YBX3-210ENST00000540975 HCRTR1O43613 425 aa3.51□□□□□ -1.85
YBX3-210ENST00000540975 KDELR3O43731 214 aa3.51□□□□□ -1.85
YBX3-210ENST00000540975 DPM1O60762 260 aa3.51□□□□□ -1.85
YBX3-210ENST00000540975 GATBO75879 557 aaKnown RBP3.51□□□□□ -1.85
YBX3-210ENST00000540975 LINC00614P0C842 121 aa3.51□□□□□ -1.85
YBX3-210ENST00000540975 SLC35E2BP0CK96 405 aa3.51□□□□□ -1.85
YBX3-210ENST00000540975 PSKH1P11801 424 aa3.51□□□□□ -1.85
YBX3-210ENST00000540975 S100PP25815 95 aa3.51□□□□□ -1.85
YBX3-210ENST00000540975 RCVRNP35243 200 aa3.51□□□□□ -1.85
YBX3-210ENST00000540975 VHLP40337 213 aa3.51□□□□□ -1.85
YBX3-210ENST00000540975 MAGEA2P43356 314 aa3.51□□□□□ -1.85
YBX3-210ENST00000540975 TGM4P49221 684 aa3.51□□□□□ -1.85
YBX3-210ENST00000540975 CCR8P51685 355 aa3.51□□□□□ -1.85
YBX3-210ENST00000540975 HNRNPA3P51991 378 aaKnown RBP3.51□□□□□ -1.85
YBX3-210ENST00000540975 OR2B6P58173 313 aa3.51□□□□□ -1.85
YBX3-210ENST00000540975 ATP6V0D1P61421 351 aa3.51□□□□□ -1.85
YBX3-210ENST00000540975 NAA20P61599 178 aa3.51□□□□□ -1.85
YBX3-210ENST00000540975 SLAMF1Q13291 335 aa3.51□□□□□ -1.85
YBX3-210ENST00000540975 AQP6Q13520 282 aa3.51□□□□□ -1.85
YBX3-210ENST00000540975 POU6F1Q14863 301 aa3.51□□□□□ -1.85
YBX3-210ENST00000540975 PDK3Q15120 406 aa3.51□□□□□ -1.85
YBX3-210ENST00000540975 IRF4Q15306 451 aa3.51□□□□□ -1.85
YBX3-210ENST00000540975 TGFBIQ15582 683 aa3.51□□□□□ -1.85
YBX3-210ENST00000540975 TOMM34Q15785 309 aaPredicted RBP3.51□□□□□ -1.85
YBX3-210ENST00000540975 KCNJ8Q15842 424 aa3.51□□□□□ -1.85
YBX3-210ENST00000540975 KLHL12Q53G59 568 aa3.51□□□□□ -1.85
YBX3-210ENST00000540975 TSPO2Q5TGU0 170 aa3.51□□□□□ -1.85
YBX3-210ENST00000540975 ACP7Q6ZNF0 438 aa3.51□□□□□ -1.85
YBX3-210ENST00000540975 PID1Q7Z2X4 250 aa3.51□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 96.1 ms