RNA–Protein interactions for RNA: ENST00000540798.5

RTN3-210, Transcript of reticulon 3, humanhuman

TSL 1 (best) BASIC

Gene RTN3, Length 3,124 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-210ENST00000540798 NAXDQ8IW45 347 aa12.15□□□□□ -0.46
RTN3-210ENST00000540798 CDH26Q8IXH8 852 aa12.15□□□□□ -0.46
RTN3-210ENST00000540798 C20orf196Q8IYI0 205 aa12.15□□□□□ -0.46
RTN3-210ENST00000540798 PAQR4Q8N4S7 273 aaPredicted RBP12.15□□□□□ -0.46
RTN3-210ENST00000540798 BEST4Q8NFU0 473 aa12.15□□□□□ -0.46
RTN3-210ENST00000540798 OR52N4Q8NGI2 321 aa12.15□□□□□ -0.46
RTN3-210ENST00000540798 OR5D14Q8NGL3 314 aa12.15□□□□□ -0.46
RTN3-210ENST00000540798 ST8SIA2Q92186 375 aa12.15□□□□□ -0.46
RTN3-210ENST00000540798 ADGRG7Q96K78 797 aa12.15□□□□□ -0.46
RTN3-210ENST00000540798 ZNF107Q9UII5 783 aaPredicted RBP12.15□□□□□ -0.46
RTN3-210ENST00000540798 NPIPA2E9PIF3 369 aa12.15□□□□□ -0.46
RTN3-210ENST00000540798 NPIPA3F8WFD2 350 aa12.15□□□□□ -0.46
RTN3-210ENST00000540798 BPNT1O95861 308 aa12.15□□□□□ -0.46
RTN3-210ENST00000540798 LPLP06858 475 aa12.15□□□□□ -0.46
RTN3-210ENST00000540798 CPN1P15169 458 aa12.15□□□□□ -0.46
RTN3-210ENST00000540798 CX3CR1P49238 355 aa12.15□□□□□ -0.46
RTN3-210ENST00000540798 CLVS2Q5SYC1 327 aa12.15□□□□□ -0.46
RTN3-210ENST00000540798 Q6ZSR3 168 aa12.15□□□□□ -0.46
RTN3-210ENST00000540798 Q6ZTK2 550 aa12.15□□□□□ -0.46
RTN3-210ENST00000540798 SLC22A24Q8N4F4 322 aa12.15□□□□□ -0.46
RTN3-210ENST00000540798 MARC2Q969Z3 335 aa12.15□□□□□ -0.46
RTN3-210ENST00000540798 PHF21AQ96BD5 680 aa12.15□□□□□ -0.46
RTN3-210ENST00000540798 RANBP3Q9H6Z4 567 aaPredicted RBP12.15□□□□□ -0.46
RTN3-210ENST00000540798 FLVCR1Q9Y5Y0 555 aa12.15□□□□□ -0.46
RTN3-210ENST00000540798 NCOA6Q14686 2063 aaPredicted RBP12.15□□□□□ -0.47
RTN3-210ENST00000540798 WIPF3A6NGB9 483 aa12.15□□□□□ -0.47
RTN3-210ENST00000540798 AKAIN1P0CW23 69 aa12.15□□□□□ -0.47
RTN3-210ENST00000540798 FOSL1P15407 271 aa12.15□□□□□ -0.47
RTN3-210ENST00000540798 RAD52P43351 418 aa12.15□□□□□ -0.47
RTN3-210ENST00000540798 SSC4DQ8WTU2 575 aa12.15□□□□□ -0.47
RTN3-210ENST00000540798 DEPPQ9NTK1 212 aa12.15□□□□□ -0.47
RTN3-210ENST00000540798 NKIRAS2Q9NYR9 191 aa12.15□□□□□ -0.47
RTN3-210ENST00000540798 FOXJ2Q9P0K8 574 aa12.15□□□□□ -0.47
RTN3-210ENST00000540798 RAB22AQ9UL26 194 aa12.15□□□□□ -0.47
RTN3-210ENST00000540798 MELTFP08582 738 aa12.14□□□□□ -0.47
RTN3-210ENST00000540798 RFPL3SP0C7P2 107 aa12.14□□□□□ -0.47
RTN3-210ENST00000540798 RAB3AP20336 220 aa12.14□□□□□ -0.47
RTN3-210ENST00000540798 M6PRP20645 277 aa12.14□□□□□ -0.47
RTN3-210ENST00000540798 OTX1P32242 354 aaPredicted RBP12.14□□□□□ -0.47
RTN3-210ENST00000540798 TAGLNQ01995 201 aaKnown RBP12.14□□□□□ -0.47
RTN3-210ENST00000540798 PMPCAQ10713 525 aa12.14□□□□□ -0.47
RTN3-210ENST00000540798 EIF3IQ13347 325 aaKnown RBP12.14□□□□□ -0.47
RTN3-210ENST00000540798 UNC119Q13432 240 aa12.14□□□□□ -0.47
RTN3-210ENST00000540798 RBMS2Q15434 407 aaKnown RBP12.14□□□□□ -0.47
RTN3-210ENST00000540798 MOGAT2Q3SYC2 334 aa12.14□□□□□ -0.47
RTN3-210ENST00000540798 FAM122CQ6P4D5 195 aa12.14□□□□□ -0.47
RTN3-210ENST00000540798 SLC36A1Q7Z2H8 476 aa12.14□□□□□ -0.47
RTN3-210ENST00000540798 OR5AS1Q8N127 324 aa12.14□□□□□ -0.47
RTN3-210ENST00000540798 TMEM229BQ8NBD8 167 aa12.14□□□□□ -0.47
RTN3-210ENST00000540798 OR4D10Q8NGI6 311 aa12.14□□□□□ -0.47
RTN3-210ENST00000540798 OR6N1Q8NGY5 312 aa12.14□□□□□ -0.47
RTN3-210ENST00000540798 AQP3Q92482 292 aa12.14□□□□□ -0.47
RTN3-210ENST00000540798 SNAPC3Q92966 411 aa12.14□□□□□ -0.47
RTN3-210ENST00000540798 NUDT16L1Q9BRJ7 211 aaKnown RBP12.14□□□□□ -0.47
RTN3-210ENST00000540798 SLCO5A1Q9H2Y9 848 aa12.14□□□□□ -0.47
RTN3-210ENST00000540798 ZNF222Q9UK12 451 aa12.14□□□□□ -0.47
RTN3-210ENST00000540798 ING4Q9UNL4 249 aa12.14□□□□□ -0.47
RTN3-210ENST00000540798 SLC5A6Q9Y289 635 aa12.14□□□□□ -0.47
RTN3-210ENST00000540798 DOCK10Q96BY6 2186 aa12.14□□□□□ -0.47
RTN3-210ENST00000540798 SNRPGP15A8MWD9 76 aa12.14□□□□□ -0.47
RTN3-210ENST00000540798 DHHO43323 396 aa12.14□□□□□ -0.47
RTN3-210ENST00000540798 ZNF780AO75290 641 aaPredicted RBP12.14□□□□□ -0.47
RTN3-210ENST00000540798 JMJD7P0C870 316 aa12.14□□□□□ -0.47
RTN3-210ENST00000540798 SELENOPP49908 381 aa12.14□□□□□ -0.47
RTN3-210ENST00000540798 ACTBP60709 375 aa12.14□□□□□ -0.47
RTN3-210ENST00000540798 ACTG1P63261 375 aa12.14□□□□□ -0.47
RTN3-210ENST00000540798 TAF13Q15543 124 aa12.14□□□□□ -0.47
RTN3-210ENST00000540798 ZNF626Q68DY1 528 aa12.14□□□□□ -0.47
RTN3-210ENST00000540798 SPICQ8N5J4 248 aa12.14□□□□□ -0.47
RTN3-210ENST00000540798 DLL4Q9NR61 685 aa12.14□□□□□ -0.47
RTN3-210ENST00000540798 KMT2EQ8IZD2 1858 aa12.14□□□□□ -0.47
RTN3-210ENST00000540798 ZNF716A6NP11 495 aa12.13□□□□□ -0.47
RTN3-210ENST00000540798 G3V3Q6 166 aa12.13□□□□□ -0.47
RTN3-210ENST00000540798 WDPCPO95876 746 aa12.13□□□□□ -0.47
RTN3-210ENST00000540798 PRKXP51817 358 aa12.13□□□□□ -0.47
RTN3-210ENST00000540798 ABLIM2Q6H8Q1 611 aa12.13□□□□□ -0.47
RTN3-210ENST00000540798 PGAP1Q75T13 922 aa12.13□□□□□ -0.47
RTN3-210ENST00000540798 DOK3Q7L591 496 aa12.13□□□□□ -0.47
RTN3-210ENST00000540798 LUZP2Q86TE4 346 aa12.13□□□□□ -0.47
RTN3-210ENST00000540798 GJC3Q8NFK1 279 aa12.13□□□□□ -0.47
RTN3-210ENST00000540798 PNPLA2Q96AD5 504 aa12.13□□□□□ -0.47
RTN3-210ENST00000540798 SOX7Q9BT81 388 aa12.13□□□□□ -0.47
RTN3-210ENST00000540798 GPR87Q9BY21 358 aa12.13□□□□□ -0.47
RTN3-210ENST00000540798 GPR84Q9NQS5 396 aa12.13□□□□□ -0.47
RTN3-210ENST00000540798 E9PLN8 166 aa12.13□□□□□ -0.47
RTN3-210ENST00000540798 RAB27BO00194 218 aa12.13□□□□□ -0.47
RTN3-210ENST00000540798 ERCC1P07992 297 aaPredicted RBP12.13□□□□□ -0.47
RTN3-210ENST00000540798 GNALP38405 381 aa12.13□□□□□ -0.47
RTN3-210ENST00000540798 FOXO1Q12778 655 aa12.13□□□□□ -0.47
RTN3-210ENST00000540798 SGCAQ16586 387 aa12.13□□□□□ -0.47
RTN3-210ENST00000540798 RSPO1Q2MKA7 263 aaPredicted RBP12.13□□□□□ -0.47
RTN3-210ENST00000540798 OR10K2Q6IF99 312 aa12.13□□□□□ -0.47
RTN3-210ENST00000540798 JMJD6Q6NYC1 403 aaPredicted RBP12.13□□□□□ -0.47
RTN3-210ENST00000540798 YRDCQ86U90 279 aaKnown RBP12.13□□□□□ -0.47
RTN3-210ENST00000540798 OR14K1Q8NGZ2 314 aa12.13□□□□□ -0.47
RTN3-210ENST00000540798 ZNF436Q9C0F3 470 aaPredicted RBP12.13□□□□□ -0.47
RTN3-210ENST00000540798 BEX1Q9HBH7 125 aa12.13□□□□□ -0.47
RTN3-210ENST00000540798 TMEM14DPA8MWL7 114 aa12.13□□□□□ -0.47
RTN3-210ENST00000540798 C21orf140B9A014 251 aa12.13□□□□□ -0.47
RTN3-210ENST00000540798 PYCARD-AS1I3L0S3 204 aa12.13□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms