RNA–Protein interactions for RNA: ENST00000540166.5

DDB1-217, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 2

Gene DDB1, Length 3,906 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-217ENST00000540166 TRHRP34981 398 aaPredicted RBP7.82□□□□□ -1.16
DDB1-217ENST00000540166 TAGLN2P37802 199 aaKnown RBP7.82□□□□□ -1.16
DDB1-217ENST00000540166 TAS2R31P59538 309 aa7.82□□□□□ -1.16
DDB1-217ENST00000540166 GAMTQ14353 236 aa7.82□□□□□ -1.16
DDB1-217ENST00000540166 SLC9A3R2Q15599 337 aa7.82□□□□□ -1.16
DDB1-217ENST00000540166 OR8G1Q15617 311 aa7.82□□□□□ -1.16
DDB1-217ENST00000540166 EXOSC6Q5RKV6 272 aaKnown RBP7.82□□□□□ -1.16
DDB1-217ENST00000540166 RNF113BQ8IZP6 322 aaKnown RBP7.82□□□□□ -1.16
DDB1-217ENST00000540166 KDF1Q8NAX2 398 aaPredicted RBP7.82□□□□□ -1.16
DDB1-217ENST00000540166 METTL21AQ8WXB1 218 aa7.82□□□□□ -1.16
DDB1-217ENST00000540166 TNFRSF13CQ96RJ3 184 aa7.82□□□□□ -1.16
DDB1-217ENST00000540166 TIMM29Q9BSF4 260 aa7.82□□□□□ -1.16
DDB1-217ENST00000540166 ZNF426Q9BUY5 554 aa7.82□□□□□ -1.16
DDB1-217ENST00000540166 ACTRT3Q9BYD9 372 aa7.82□□□□□ -1.16
DDB1-217ENST00000540166 RAB33BQ9H082 229 aa7.82□□□□□ -1.16
DDB1-217ENST00000540166 PPP1R14DQ9NXH3 145 aa7.82□□□□□ -1.16
DDB1-217ENST00000540166 ALPK2Q86TB3 2170 aa7.82□□□□□ -1.16
DDB1-217ENST00000540166 ANKRD11Q6UB99 2663 aaPredicted RBP7.82□□□□□ -1.16
DDB1-217ENST00000540166 NME2P1O60361 137 aa7.82□□□□□ -1.16
DDB1-217ENST00000540166 CTNSO60931 367 aa7.82□□□□□ -1.16
DDB1-217ENST00000540166 NDUFB2O95178 105 aa7.82□□□□□ -1.16
DDB1-217ENST00000540166 CEACAM5P06731 702 aa7.82□□□□□ -1.16
DDB1-217ENST00000540166 OR8U8P0C7N1 319 aa7.82□□□□□ -1.16
DDB1-217ENST00000540166 RCC1P18754 421 aaPredicted RBP7.82□□□□□ -1.16
DDB1-217ENST00000540166 CCR4P51679 360 aa7.82□□□□□ -1.16
DDB1-217ENST00000540166 MRGPREQ86SM8 312 aa7.82□□□□□ -1.16
DDB1-217ENST00000540166 PNLDC1Q8NA58 520 aaKnown RBP7.82□□□□□ -1.16
DDB1-217ENST00000540166 SLC16A11Q8NCK7 471 aa7.82□□□□□ -1.16
DDB1-217ENST00000540166 SLC30A7Q8NEW0 376 aa7.82□□□□□ -1.16
DDB1-217ENST00000540166 OR9K2Q8NGE7 335 aa7.82□□□□□ -1.16
DDB1-217ENST00000540166 APOBEC4Q8WW27 367 aaKnown RBP7.82□□□□□ -1.16
DDB1-217ENST00000540166 RGP1Q92546 391 aaPredicted RBP7.82□□□□□ -1.16
DDB1-217ENST00000540166 SPOCK3Q9BQ16 436 aa7.82□□□□□ -1.16
DDB1-217ENST00000540166 SLCO5A1Q9H2Y9 848 aa7.82□□□□□ -1.16
DDB1-217ENST00000540166 SEBOXQ9HB31 216 aaPredicted RBP7.82□□□□□ -1.16
DDB1-217ENST00000540166 VSX1Q9NZR4 365 aaPredicted RBP7.82□□□□□ -1.16
DDB1-217ENST00000540166 ZNF443Q9Y2A4 671 aaPredicted RBP7.82□□□□□ -1.16
DDB1-217ENST00000540166 GPR55Q9Y2T6 319 aaPredicted RBP7.82□□□□□ -1.16
DDB1-217ENST00000540166 SEC16AO15027 2179 aa7.82□□□□□ -1.16
DDB1-217ENST00000540166 NOTCH2Q04721 2471 aa7.81□□□□□ -1.16
DDB1-217ENST00000540166 ZNF860A6NHJ4 632 aa7.81□□□□□ -1.16
DDB1-217ENST00000540166 CLEC3AO75596 197 aa7.81□□□□□ -1.16
DDB1-217ENST00000540166 AIFM1O95831 613 aa7.81□□□□□ -1.16
DDB1-217ENST00000540166 THBS1P07996 1170 aa7.81□□□□□ -1.16
DDB1-217ENST00000540166 CCL11P51671 97 aa7.81□□□□□ -1.16
DDB1-217ENST00000540166 RRADP55042 308 aa7.81□□□□□ -1.16
DDB1-217ENST00000540166 EFNB1P98172 346 aa7.81□□□□□ -1.16
DDB1-217ENST00000540166 OR1Q1Q15612 314 aa7.81□□□□□ -1.16
DDB1-217ENST00000540166 BATFQ16520 125 aa7.81□□□□□ -1.16
DDB1-217ENST00000540166 GUK1Q16774 197 aa7.81□□□□□ -1.16
DDB1-217ENST00000540166 TMEM35AQ53FP2 167 aa7.81□□□□□ -1.16
DDB1-217ENST00000540166 ALKBH2Q6NS38 261 aa7.81□□□□□ -1.16
DDB1-217ENST00000540166 GPBAR1Q8TDU6 330 aa7.81□□□□□ -1.16
DDB1-217ENST00000540166 SLC46A1Q96NT5 459 aa7.81□□□□□ -1.16
DDB1-217ENST00000540166 SRA1Q9HD15 236 aaKnown RBP7.81□□□□□ -1.16
DDB1-217ENST00000540166 SLC23A2Q9UGH3 650 aa7.81□□□□□ -1.16
DDB1-217ENST00000540166 MYO18BQ8IUG5 2567 aa7.81□□□□□ -1.16
DDB1-217ENST00000540166 SCN3AQ9NY46 2000 aa7.81□□□□□ -1.16
DDB1-217ENST00000540166 KIF26AQ9ULI4 1882 aaPredicted RBP7.81□□□□□ -1.16
DDB1-217ENST00000540166 K7EPK0 472 aa7.81□□□□□ -1.16
DDB1-217ENST00000540166 OGG1O15527 345 aa7.81□□□□□ -1.16
DDB1-217ENST00000540166 ERCC1P07992 297 aaPredicted RBP7.81□□□□□ -1.16
DDB1-217ENST00000540166 OR8U9P0C7N5 309 aa7.81□□□□□ -1.16
DDB1-217ENST00000540166 SLC35G6P0C7Q6 338 aa7.81□□□□□ -1.16
DDB1-217ENST00000540166 PDX1P52945 283 aa7.81□□□□□ -1.16
DDB1-217ENST00000540166 PRDX1Q06830 199 aaKnown RBP7.81□□□□□ -1.16
DDB1-217ENST00000540166 DPTQ07507 201 aa7.81□□□□□ -1.16
DDB1-217ENST00000540166 FOXO1Q12778 655 aa7.81□□□□□ -1.16
DDB1-217ENST00000540166 LY6DQ14210 128 aa7.81□□□□□ -1.16
DDB1-217ENST00000540166 LCN10Q6JVE6 187 aa7.81□□□□□ -1.16
DDB1-217ENST00000540166 SLC22A25Q6T423 547 aa7.81□□□□□ -1.16
DDB1-217ENST00000540166 DHRS11Q6UWP2 260 aa7.81□□□□□ -1.16
DDB1-217ENST00000540166 FAM71E2Q8N5Q1 922 aa7.81□□□□□ -1.16
DDB1-217ENST00000540166 WDR34Q96EX3 536 aa7.81□□□□□ -1.16
DDB1-217ENST00000540166 UCK1Q9HA47 277 aa7.81□□□□□ -1.16
DDB1-217ENST00000540166 BARX1Q9HBU1 254 aaPredicted RBP7.81□□□□□ -1.16
DDB1-217ENST00000540166 FGF21Q9NSA1 209 aa7.81□□□□□ -1.16
DDB1-217ENST00000540166 ENTPD2Q9Y5L3 495 aa7.81□□□□□ -1.16
DDB1-217ENST00000540166 TMEM272A0A1B0GTI8 110 aa7.81□□□□□ -1.16
DDB1-217ENST00000540166 FITM1A5D6W6 292 aa7.81□□□□□ -1.16
DDB1-217ENST00000540166 BLOC1S5-TXNDC5H3BN57 136 aa7.81□□□□□ -1.16
DDB1-217ENST00000540166 HOXB5P09067 269 aa7.81□□□□□ -1.16
DDB1-217ENST00000540166 CCL4P13236 92 aa7.81□□□□□ -1.16
DDB1-217ENST00000540166 RBMXP38159 391 aaKnown RBP7.81□□□□□ -1.16
DDB1-217ENST00000540166 RAB28P51157 221 aa7.81□□□□□ -1.16
DDB1-217ENST00000540166 CSNK1G2P78368 415 aa7.81□□□□□ -1.16
DDB1-217ENST00000540166 DCDP81605 110 aaKnown RBP7.81□□□□□ -1.16
DDB1-217ENST00000540166 NAAAQ02083 359 aa7.81□□□□□ -1.16
DDB1-217ENST00000540166 RELQ04864 619 aaPredicted RBP7.81□□□□□ -1.16
DDB1-217ENST00000540166 PPP1R1AQ13522 171 aa7.81□□□□□ -1.16
DDB1-217ENST00000540166 ARHGAP19Q14CB8 494 aa7.81□□□□□ -1.16
DDB1-217ENST00000540166 AGERQ15109 404 aa7.81□□□□□ -1.16
DDB1-217ENST00000540166 TOMM34Q15785 309 aaPredicted RBP7.81□□□□□ -1.16
DDB1-217ENST00000540166 DEFB134Q4QY38 66 aa7.81□□□□□ -1.16
DDB1-217ENST00000540166 C4orf17Q53FE4 359 aa7.81□□□□□ -1.16
DDB1-217ENST00000540166 ATPAF1Q5TC12 328 aaPredicted RBP7.81□□□□□ -1.16
DDB1-217ENST00000540166 CLEC1AQ8NC01 280 aa7.81□□□□□ -1.16
DDB1-217ENST00000540166 ASB17Q8WXJ9 295 aa7.81□□□□□ -1.16
DDB1-217ENST00000540166 EXTL1Q92935 676 aa7.81□□□□□ -1.16
DDB1-217ENST00000540166 ZNF587Q96SQ5 575 aaPredicted RBP7.81□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms