RNA–Protein interactions for RNA: ENST00000539522.2

CCDC42-202, Transcript of coiled-coil domain containing 42, humanhuman

TSL 1 (best) BASIC

Gene CCDC42, Length 1,087 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC42-202ENST00000539522 PLP2Q04941 152 aa11.16□□□□□ -0.62
CCDC42-202ENST00000539522 EGR3Q06889 387 aa11.16□□□□□ -0.62
CCDC42-202ENST00000539522 MRPL28Q13084 256 aaKnown RBP11.16□□□□□ -0.62
CCDC42-202ENST00000539522 TSTQ16762 297 aaKnown RBP11.16□□□□□ -0.62
CCDC42-202ENST00000539522 SWI5Q1ZZU3 235 aa11.16□□□□□ -0.62
CCDC42-202ENST00000539522 TBC1D28Q2M2D7 210 aa11.16□□□□□ -0.62
CCDC42-202ENST00000539522 SNAI3Q3KNW1 292 aa11.16□□□□□ -0.62
CCDC42-202ENST00000539522 CDONQ4KMG0 1287 aa11.16□□□□□ -0.62
CCDC42-202ENST00000539522 ZNF611Q8N823 705 aa11.16□□□□□ -0.62
CCDC42-202ENST00000539522 RAB2BQ8WUD1 216 aa11.16□□□□□ -0.62
CCDC42-202ENST00000539522 THEM6Q8WUY1 208 aa11.16□□□□□ -0.62
CCDC42-202ENST00000539522 MARS2Q96GW9 593 aaKnown RBP11.16□□□□□ -0.62
CCDC42-202ENST00000539522 C4orf45Q96LM5 186 aa11.16□□□□□ -0.62
CCDC42-202ENST00000539522 OPALINQ96PE5 141 aa11.16□□□□□ -0.62
CCDC42-202ENST00000539522 OR8B4Q96RC9 309 aa11.16□□□□□ -0.62
CCDC42-202ENST00000539522 C1QTNF5Q9BXJ0 243 aa11.16□□□□□ -0.62
CCDC42-202ENST00000539522 ISG20L2Q9H9L3 353 aaKnown RBP11.16□□□□□ -0.62
CCDC42-202ENST00000539522 UBTD1Q9HAC8 227 aa11.16□□□□□ -0.62
CCDC42-202ENST00000539522 MRM2Q9UI43 246 aaKnown RBP11.16□□□□□ -0.62
CCDC42-202ENST00000539522 FZR1Q9UM11 496 aa11.16□□□□□ -0.62
CCDC42-202ENST00000539522 STARD10Q9Y365 291 aa11.16□□□□□ -0.62
CCDC42-202ENST00000539522 LRP12Q9Y561 859 aa11.16□□□□□ -0.62
CCDC42-202ENST00000539522 METTL15A6NJ78 407 aa11.15□□□□□ -0.62
CCDC42-202ENST00000539522 ZNF878C9JN71 531 aa11.15□□□□□ -0.62
CCDC42-202ENST00000539522 ATE1O95260 518 aa11.15□□□□□ -0.62
CCDC42-202ENST00000539522 PNPP00491 289 aa11.15□□□□□ -0.62
CCDC42-202ENST00000539522 SLC2A1P11166 492 aa11.15□□□□□ -0.62
CCDC42-202ENST00000539522 CD53P19397 219 aa11.15□□□□□ -0.62
CCDC42-202ENST00000539522 GLRXP35754 106 aa11.15□□□□□ -0.62
CCDC42-202ENST00000539522 MPV17P39210 176 aa11.15□□□□□ -0.62
CCDC42-202ENST00000539522 PRSS12P56730 875 aa11.15□□□□□ -0.62
CCDC42-202ENST00000539522 OR12D2P58182 307 aa11.15□□□□□ -0.62
CCDC42-202ENST00000539522 TAS2R43P59537 309 aa11.15□□□□□ -0.62
CCDC42-202ENST00000539522 ALKBH6Q3KRA9 238 aa11.15□□□□□ -0.62
CCDC42-202ENST00000539522 TIMM50Q3ZCQ8 353 aa11.15□□□□□ -0.62
CCDC42-202ENST00000539522 CCDC58Q4VC31 144 aa11.15□□□□□ -0.62
CCDC42-202ENST00000539522 SPATA46Q5T0L3 261 aa11.15□□□□□ -0.62
CCDC42-202ENST00000539522 KCTD18Q6PI47 426 aaPredicted RBP11.15□□□□□ -0.62
CCDC42-202ENST00000539522 VHLLQ6RSH7 139 aa11.15□□□□□ -0.62
CCDC42-202ENST00000539522 DTX2Q86UW9 622 aa11.15□□□□□ -0.62
CCDC42-202ENST00000539522 KLBQ86Z14 1044 aa11.15□□□□□ -0.62
CCDC42-202ENST00000539522 ALDH16A1Q8IZ83 802 aa11.15□□□□□ -0.62
CCDC42-202ENST00000539522 UFD1Q92890 307 aa11.15□□□□□ -0.62
CCDC42-202ENST00000539522 PPP1R14AQ96A00 147 aa11.15□□□□□ -0.62
CCDC42-202ENST00000539522 C4orf36Q96KX1 117 aa11.15□□□□□ -0.62
CCDC42-202ENST00000539522 DOK1Q99704 481 aa11.15□□□□□ -0.62
CCDC42-202ENST00000539522 KCNJ15Q99712 375 aa11.15□□□□□ -0.62
CCDC42-202ENST00000539522 DHRS9Q9BPW9 319 aa11.15□□□□□ -0.62
CCDC42-202ENST00000539522 MRPL37Q9BZE1 423 aaKnown RBP11.15□□□□□ -0.62
CCDC42-202ENST00000539522 ZNF442Q9H7R0 627 aa11.15□□□□□ -0.62
CCDC42-202ENST00000539522 CDH20Q9HBT6 801 aa11.15□□□□□ -0.62
CCDC42-202ENST00000539522 TRIM36Q9NQ86 728 aa11.15□□□□□ -0.62
CCDC42-202ENST00000539522 CENPMQ9NSP4 180 aa11.15□□□□□ -0.62
CCDC42-202ENST00000539522 ANKRD17O75179 2603 aaKnown RBP11.15□□□□□ -0.62
CCDC42-202ENST00000539522 OTOGQ6ZRI0 2925 aa11.15□□□□□ -0.63
CCDC42-202ENST00000539522 SPG11Q96JI7 2443 aa11.14□□□□□ -0.63
CCDC42-202ENST00000539522 F5H5K5 113 aa11.14□□□□□ -0.63
CCDC42-202ENST00000539522 M0R135 149 aa11.14□□□□□ -0.63
CCDC42-202ENST00000539522 OVOL3O00110 214 aa11.14□□□□□ -0.63
CCDC42-202ENST00000539522 OGG1O15527 345 aa11.14□□□□□ -0.63
CCDC42-202ENST00000539522 KRT8P05787 483 aa11.14□□□□□ -0.63
CCDC42-202ENST00000539522 OR4A8P0C604 315 aa11.14□□□□□ -0.63
CCDC42-202ENST00000539522 ZNF250P15622 560 aa11.14□□□□□ -0.63
CCDC42-202ENST00000539522 PSMA1P25786 263 aaKnown RBP11.14□□□□□ -0.63
CCDC42-202ENST00000539522 TGFBR2P37173 567 aa11.14□□□□□ -0.63
CCDC42-202ENST00000539522 PRKXP51817 358 aa11.14□□□□□ -0.63
CCDC42-202ENST00000539522 GALK2Q01415 458 aa11.14□□□□□ -0.63
CCDC42-202ENST00000539522 MFGE8Q08431 387 aaPredicted RBP11.14□□□□□ -0.63
CCDC42-202ENST00000539522 PAMR1Q6UXH9 720 aa11.14□□□□□ -0.63
CCDC42-202ENST00000539522 GDPGP1Q6ZNW5 385 aa11.14□□□□□ -0.63
CCDC42-202ENST00000539522 RHOUQ7L0Q8 258 aa11.14□□□□□ -0.63
CCDC42-202ENST00000539522 PHC2Q8IXK0 858 aa11.14□□□□□ -0.63
CCDC42-202ENST00000539522 OR1J2Q8NGS2 313 aa11.14□□□□□ -0.63
CCDC42-202ENST00000539522 ABHD4Q8TB40 342 aa11.14□□□□□ -0.63
CCDC42-202ENST00000539522 SLC25A40Q8TBP6 338 aa11.14□□□□□ -0.63
CCDC42-202ENST00000539522 GTF3AQ92664 365 aaKnown RBP11.14□□□□□ -0.63
CCDC42-202ENST00000539522 FBXW5Q969U6 566 aa11.14□□□□□ -0.63
CCDC42-202ENST00000539522 ISOC1Q96CN7 298 aa11.14□□□□□ -0.63
CCDC42-202ENST00000539522 ZNF799Q96GE5 643 aa11.14□□□□□ -0.63
CCDC42-202ENST00000539522 SOX7Q9BT81 388 aa11.14□□□□□ -0.63
CCDC42-202ENST00000539522 TRAF4Q9BUZ4 470 aaPredicted RBP11.14□□□□□ -0.63
CCDC42-202ENST00000539522 OR2J1Q9GZK6 312 aa11.14□□□□□ -0.63
CCDC42-202ENST00000539522 TBCCD1Q9NVR7 557 aa11.14□□□□□ -0.63
CCDC42-202ENST00000539522 ENPP5Q9UJA9 477 aa11.14□□□□□ -0.63
CCDC42-202ENST00000539522 GRIP1Q9Y3R0 1128 aa11.14□□□□□ -0.63
CCDC42-202ENST00000539522 CHD3Q12873 2000 aaKnown RBP11.14□□□□□ -0.63
CCDC42-202ENST00000539522 TEX15Q9BXT5 2789 aa11.14□□□□□ -0.63
CCDC42-202ENST00000539522 IGLV3-9A0A075B6K5 115 aa11.13□□□□□ -0.63
CCDC42-202ENST00000539522 AIREO43918 545 aa11.13□□□□□ -0.63
CCDC42-202ENST00000539522 LILRA1O75019 489 aa11.13□□□□□ -0.63
CCDC42-202ENST00000539522 ZNF254O75437 659 aa11.13□□□□□ -0.63
CCDC42-202ENST00000539522 CD1AP06126 327 aa11.13□□□□□ -0.63
CCDC42-202ENST00000539522 APOBEC3AP31941 199 aaPredicted RBP11.13□□□□□ -0.63
CCDC42-202ENST00000539522 TGM4P49221 684 aa11.13□□□□□ -0.63
CCDC42-202ENST00000539522 PPP1CBP62140 327 aa11.13□□□□□ -0.63
CCDC42-202ENST00000539522 ECH1Q13011 328 aa11.13□□□□□ -0.63
CCDC42-202ENST00000539522 TNK1Q13470 666 aa11.13□□□□□ -0.63
CCDC42-202ENST00000539522 HLXQ14774 488 aaPredicted RBP11.13□□□□□ -0.63
CCDC42-202ENST00000539522 EFNB3Q15768 340 aa11.13□□□□□ -0.63
CCDC42-202ENST00000539522 SSX1Q16384 188 aa11.13□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms