RNA–Protein interactions for RNA: ENST00000539097.2

HIF1A-204, Transcript of hypoxia inducible factor 1 subunit alpha, humanhuman

TSL 1 (best) BASIC

Gene HIF1A, Length 3,956 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF1A-204ENST00000539097 GNA11P29992 359 aa0.72□□□□□ -2.29
HIF1A-204ENST00000539097 GTF2H1P32780 548 aa0.72□□□□□ -2.29
HIF1A-204ENST00000539097 MPV17P39210 176 aa0.72□□□□□ -2.29
HIF1A-204ENST00000539097 MDH2P40926 338 aaKnown RBP0.72□□□□□ -2.29
HIF1A-204ENST00000539097 NPBWR2P48146 333 aa0.72□□□□□ -2.29
HIF1A-204ENST00000539097 PKNOX1P55347 436 aa0.72□□□□□ -2.29
HIF1A-204ENST00000539097 ACVR1Q04771 509 aa0.72□□□□□ -2.29
HIF1A-204ENST00000539097 MERTKQ12866 999 aa0.72□□□□□ -2.29
HIF1A-204ENST00000539097 BTN1A1Q13410 526 aa0.72□□□□□ -2.29
HIF1A-204ENST00000539097 ALX1Q15699 326 aa0.72□□□□□ -2.29
HIF1A-204ENST00000539097 QRICH1Q2TAL8 776 aa0.72□□□□□ -2.29
HIF1A-204ENST00000539097 SAPCD1Q5SSQ6 148 aa0.72□□□□□ -2.29
HIF1A-204ENST00000539097 PRAMEF5Q5TYX0 476 aa0.72□□□□□ -2.29
HIF1A-204ENST00000539097 C9orf135Q5VTT2 229 aa0.72□□□□□ -2.29
HIF1A-204ENST00000539097 PRAMEF6Q5VXH4 476 aa0.72□□□□□ -2.29
HIF1A-204ENST00000539097 ZNF470Q6ECI4 717 aa0.72□□□□□ -2.29
HIF1A-204ENST00000539097 C22orf42Q6IC83 251 aa0.72□□□□□ -2.29
HIF1A-204ENST00000539097 DUX4L9Q6RFH8 374 aaPredicted RBP0.72□□□□□ -2.29
HIF1A-204ENST00000539097 LINC00173Q6ZV60 143 aa0.72□□□□□ -2.29
HIF1A-204ENST00000539097 TMEM179Q6ZVK1 233 aa0.72□□□□□ -2.29
HIF1A-204ENST00000539097 FAM220AQ7Z4H9 259 aa0.72□□□□□ -2.29
HIF1A-204ENST00000539097 VRK2Q86Y07 508 aa0.72□□□□□ -2.29
HIF1A-204ENST00000539097 HIPK1Q86Z02 1210 aa0.72□□□□□ -2.29
HIF1A-204ENST00000539097 ENTHD1Q8IYW4 607 aa0.72□□□□□ -2.29
HIF1A-204ENST00000539097 PUSL1Q8N0Z8 303 aaKnown RBP0.72□□□□□ -2.29
HIF1A-204ENST00000539097 TMEM104Q8NE00 496 aa0.72□□□□□ -2.29
HIF1A-204ENST00000539097 ERMNQ8TAM6 284 aa0.72□□□□□ -2.29
HIF1A-204ENST00000539097 ABHD3Q8WU67 409 aa0.72□□□□□ -2.29
HIF1A-204ENST00000539097 MS4A14Q96JA4 679 aa0.72□□□□□ -2.29
HIF1A-204ENST00000539097 ZNF514Q96K75 400 aaPredicted RBP0.72□□□□□ -2.29
HIF1A-204ENST00000539097 ATP6V1G3Q96LB4 118 aa0.72□□□□□ -2.29
HIF1A-204ENST00000539097 APOL4Q9BPW4 351 aa0.72□□□□□ -2.29
HIF1A-204ENST00000539097 UQCC2Q9BRT2 126 aa0.72□□□□□ -2.29
HIF1A-204ENST00000539097 TEKT3Q9BXF9 490 aa0.72□□□□□ -2.29
HIF1A-204ENST00000539097 MAP1LC3CQ9BXW4 147 aa0.72□□□□□ -2.29
HIF1A-204ENST00000539097 RGCCQ9H4X1 137 aa0.72□□□□□ -2.29
HIF1A-204ENST00000539097 MRM3Q9HC36 420 aaKnown RBP0.72□□□□□ -2.29
HIF1A-204ENST00000539097 CLCF1Q9UBD9 225 aa0.72□□□□□ -2.29
HIF1A-204ENST00000539097 DUX4Q9UBX2 424 aa0.72□□□□□ -2.29
HIF1A-204ENST00000539097 CLEC2DQ9UHP7 191 aa0.72□□□□□ -2.29
HIF1A-204ENST00000539097 MRM2Q9UI43 246 aaKnown RBP0.72□□□□□ -2.29
HIF1A-204ENST00000539097 KCNIP3Q9Y2W7 256 aa0.72□□□□□ -2.29
HIF1A-204ENST00000539097 WIF1Q9Y5W5 379 aa0.72□□□□□ -2.29
HIF1A-204ENST00000539097 RAPGEF2Q9Y4G8 1499 aa0.72□□□□□ -2.29
HIF1A-204ENST00000539097 PTPRKQ15262 1439 aa0.72□□□□□ -2.29
HIF1A-204ENST00000539097 ZFHX3Q15911 3703 aa0.72□□□□□ -2.29
HIF1A-204ENST00000539097 NACAE9PAV3 2078 aa0.72□□□□□ -2.29
HIF1A-204ENST00000539097 TEX14Q8IWB6 1497 aa0.72□□□□□ -2.29
HIF1A-204ENST00000539097 CENPVL3A0A0U1RRI6 287 aa0.72□□□□□ -2.29
HIF1A-204ENST00000539097 A0A1W2PRG6 482 aa0.72□□□□□ -2.29
HIF1A-204ENST00000539097 USP27XA6NNY8 438 aa0.72□□□□□ -2.29
HIF1A-204ENST00000539097 C2orf74A8MZ97 194 aa0.72□□□□□ -2.29
HIF1A-204ENST00000539097 TRIM49D1C9J1S8 452 aa0.72□□□□□ -2.29
HIF1A-204ENST00000539097 KLRC4-KLRK1H3BQV0 150 aa0.72□□□□□ -2.29
HIF1A-204ENST00000539097 WRBO00258 174 aa0.72□□□□□ -2.29
HIF1A-204ENST00000539097 UPK2O00526 184 aa0.72□□□□□ -2.29
HIF1A-204ENST00000539097 PSPHP1O15172 72 aa0.72□□□□□ -2.29
HIF1A-204ENST00000539097 TOX3O15405 576 aaPredicted RBP0.72□□□□□ -2.29
HIF1A-204ENST00000539097 SLC31A1O15431 190 aa0.72□□□□□ -2.29
HIF1A-204ENST00000539097 ZW10O43264 779 aa0.72□□□□□ -2.29
HIF1A-204ENST00000539097 TRAPPC3O43617 180 aa0.72□□□□□ -2.29
HIF1A-204ENST00000539097 PFKFB2O60825 505 aa0.72□□□□□ -2.29
HIF1A-204ENST00000539097 HUS1O60921 280 aa0.72□□□□□ -2.29
HIF1A-204ENST00000539097 OR2J3O76001 311 aa0.72□□□□□ -2.29
HIF1A-204ENST00000539097 MYO1DO94832 1006 aa0.72□□□□□ -2.29
HIF1A-204ENST00000539097 NSA2O95478 260 aaKnown RBP0.72□□□□□ -2.29
HIF1A-204ENST00000539097 CATP04040 527 aaKnown RBP0.72□□□□□ -2.29
HIF1A-204ENST00000539097 S100A9P06702 114 aaKnown RBP0.72□□□□□ -2.29
HIF1A-204ENST00000539097 ICAM2P13598 275 aa0.72□□□□□ -2.29
HIF1A-204ENST00000539097 RAB3AP20336 220 aa0.72□□□□□ -2.29
HIF1A-204ENST00000539097 CXCR2P25025 360 aa0.72□□□□□ -2.29
HIF1A-204ENST00000539097 IVDP26440 423 aa0.72□□□□□ -2.29
HIF1A-204ENST00000539097 GPR6P46095 362 aaPredicted RBP0.72□□□□□ -2.29
HIF1A-204ENST00000539097 NDPQ00604 133 aa0.72□□□□□ -2.29
HIF1A-204ENST00000539097 RCAN2Q14206 197 aa0.72□□□□□ -2.29
HIF1A-204ENST00000539097 CASP8Q14790 479 aa0.72□□□□□ -2.29
HIF1A-204ENST00000539097 DUPD1Q68J44 220 aa0.72□□□□□ -2.29
HIF1A-204ENST00000539097 PGAP1Q75T13 922 aa0.72□□□□□ -2.29
HIF1A-204ENST00000539097 SLC35D2Q76EJ3 337 aa0.72□□□□□ -2.29
HIF1A-204ENST00000539097 EIF3MQ7L2H7 374 aaKnown RBP0.72□□□□□ -2.29
HIF1A-204ENST00000539097 MRPL52Q86TS9 123 aaKnown RBP0.72□□□□□ -2.29
HIF1A-204ENST00000539097 TGIF2LYQ8IUE0 185 aa0.72□□□□□ -2.29
HIF1A-204ENST00000539097 RDH10Q8IZV5 341 aa0.72□□□□□ -2.29
HIF1A-204ENST00000539097 LYPD1Q8N2G4 141 aa0.72□□□□□ -2.29
HIF1A-204ENST00000539097 C2orf73Q8N5S3 287 aaPredicted RBP0.72□□□□□ -2.29
HIF1A-204ENST00000539097 TPRX1Q8N7U7 411 aa0.72□□□□□ -2.29
HIF1A-204ENST00000539097 OR4A4PQ8NGN8 299 aa0.72□□□□□ -2.29
HIF1A-204ENST00000539097 TRUB1Q8WWH5 349 aaKnown RBP0.72□□□□□ -2.29
HIF1A-204ENST00000539097 WDR34Q96EX3 536 aa0.72□□□□□ -2.29
HIF1A-204ENST00000539097 FOPNLQ96NB1 174 aa0.72□□□□□ -2.29
HIF1A-204ENST00000539097 C1orf50Q9BV19 199 aa0.72□□□□□ -2.29
HIF1A-204ENST00000539097 SLC38A1Q9H2H9 487 aa0.72□□□□□ -2.29
HIF1A-204ENST00000539097 CWH43Q9H720 699 aa0.72□□□□□ -2.29
HIF1A-204ENST00000539097 RETNQ9HD89 108 aa0.72□□□□□ -2.29
HIF1A-204ENST00000539097 FGF20Q9NP95 211 aaPredicted RBP0.72□□□□□ -2.29
HIF1A-204ENST00000539097 LSM7Q9UK45 103 aaKnown RBP0.72□□□□□ -2.29
HIF1A-204ENST00000539097 ALG6Q9Y672 507 aa0.72□□□□□ -2.29
HIF1A-204ENST00000539097 CD109Q6YHK3 1445 aa0.71□□□□□ -2.3
HIF1A-204ENST00000539097 FGD6Q6ZV73 1430 aa0.71□□□□□ -2.3
HIF1A-204ENST00000539097 ZFYVE16Q7Z3T8 1539 aa0.71□□□□□ -2.3
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms