RNA–Protein interactions for RNA: ENST00000538280.1

DDB1-211, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 3

Gene DDB1, Length 227 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-211ENST00000538280 HIST2H2ABQ8IUE6 130 aaPredicted RBP8.18□□□□□ -1.1
DDB1-211ENST00000538280 PAQR4Q8N4S7 273 aaPredicted RBP8.18□□□□□ -1.1
DDB1-211ENST00000538280 ZNF680Q8NEM1 530 aa8.18□□□□□ -1.1
DDB1-211ENST00000538280 OR2AK2Q8NG84 335 aa8.18□□□□□ -1.1
DDB1-211ENST00000538280 OR1M1Q8NGA1 313 aa8.18□□□□□ -1.1
DDB1-211ENST00000538280 OR8H1Q8NGG4 311 aa8.18□□□□□ -1.1
DDB1-211ENST00000538280 OR2T35Q8NGX2 323 aa8.18□□□□□ -1.1
DDB1-211ENST00000538280 PAQR8Q8TEZ7 354 aa8.18□□□□□ -1.1
DDB1-211ENST00000538280 ASB13Q8WXK3 278 aa8.18□□□□□ -1.1
DDB1-211ENST00000538280 TMEM54Q969K7 222 aa8.18□□□□□ -1.1
DDB1-211ENST00000538280 RELTQ969Z4 430 aa8.18□□□□□ -1.1
DDB1-211ENST00000538280 DACT3Q96B18 629 aaPredicted RBP8.18□□□□□ -1.1
DDB1-211ENST00000538280 FGGYQ96C11 551 aa8.18□□□□□ -1.1
DDB1-211ENST00000538280 ADAT3Q96EY9 351 aaPredicted RBP8.18□□□□□ -1.1
DDB1-211ENST00000538280 OR5B2Q96R09 309 aa8.18□□□□□ -1.1
DDB1-211ENST00000538280 GINS4Q9BRT9 223 aa8.18□□□□□ -1.1
DDB1-211ENST00000538280 PTGES2Q9H7Z7 377 aa8.18□□□□□ -1.1
DDB1-211ENST00000538280 CENPMQ9NSP4 180 aa8.18□□□□□ -1.1
DDB1-211ENST00000538280 SLC2A8Q9NY64 477 aa8.18□□□□□ -1.1
DDB1-211ENST00000538280 GPN3Q9UHW5 284 aaPredicted RBP8.18□□□□□ -1.1
DDB1-211ENST00000538280 RAB22AQ9UL26 194 aa8.18□□□□□ -1.1
DDB1-211ENST00000538280 ANAPC10Q9UM13 185 aa8.18□□□□□ -1.1
DDB1-211ENST00000538280 SLC5A6Q9Y289 635 aa8.18□□□□□ -1.1
DDB1-211ENST00000538280 HS3ST3B1Q9Y662 390 aa8.18□□□□□ -1.1
DDB1-211ENST00000538280 KNTC1P50748 2209 aa8.17□□□□□ -1.1
DDB1-211ENST00000538280 A0A1W2PPL8 197 aa8.17□□□□□ -1.1
DDB1-211ENST00000538280 TUBAL3A6NHL2 446 aa8.17□□□□□ -1.1
DDB1-211ENST00000538280 TMEM14DPA8MWL7 114 aa8.17□□□□□ -1.1
DDB1-211ENST00000538280 RAB27BO00194 218 aa8.17□□□□□ -1.1
DDB1-211ENST00000538280 EIF1AYO14602 144 aaKnown RBP8.17□□□□□ -1.1
DDB1-211ENST00000538280 SYT7O43581 403 aa8.17□□□□□ -1.1
DDB1-211ENST00000538280 SCGNO76038 276 aa8.17□□□□□ -1.1
DDB1-211ENST00000538280 RGS11O94810 467 aa8.17□□□□□ -1.1
DDB1-211ENST00000538280 NR2C1P13056 603 aa8.17□□□□□ -1.1
DDB1-211ENST00000538280 LIFP15018 202 aa8.17□□□□□ -1.1
DDB1-211ENST00000538280 ZNF17P17021 662 aa8.17□□□□□ -1.1
DDB1-211ENST00000538280 SUCLG1P53597 346 aaKnown RBP8.17□□□□□ -1.1
DDB1-211ENST00000538280 LSM6P62312 80 aaKnown RBP8.17□□□□□ -1.1
DDB1-211ENST00000538280 HIST1H3AP68431 136 aa8.17□□□□□ -1.1
DDB1-211ENST00000538280 MFAP5Q13361 173 aa8.17□□□□□ -1.1
DDB1-211ENST00000538280 UNC119Q13432 240 aa8.17□□□□□ -1.1
DDB1-211ENST00000538280 ZMYND11Q15326 602 aa8.17□□□□□ -1.1
DDB1-211ENST00000538280 MOGAT2Q3SYC2 334 aa8.17□□□□□ -1.1
DDB1-211ENST00000538280 CLLU1Q5K131 121 aa8.17□□□□□ -1.1
DDB1-211ENST00000538280 HIST2H3PS2Q5TEC6 136 aa8.17□□□□□ -1.1
DDB1-211ENST00000538280 HIST2H3AQ71DI3 136 aa8.17□□□□□ -1.1
DDB1-211ENST00000538280 OR2W3Q7Z3T1 314 aa8.17□□□□□ -1.1
DDB1-211ENST00000538280 OR5AS1Q8N127 324 aa8.17□□□□□ -1.1
DDB1-211ENST00000538280 FTMTQ8N4E7 242 aa8.17□□□□□ -1.1
DDB1-211ENST00000538280 SLC22A24Q8N4F4 322 aa8.17□□□□□ -1.1
DDB1-211ENST00000538280 JAGN1Q8N5M9 183 aa8.17□□□□□ -1.1
DDB1-211ENST00000538280 MEIOBQ8N635 442 aa8.17□□□□□ -1.1
DDB1-211ENST00000538280 AGBL5Q8NDL9 886 aa8.17□□□□□ -1.1
DDB1-211ENST00000538280 OR51S1Q8NGJ8 323 aa8.17□□□□□ -1.1
DDB1-211ENST00000538280 OR5M1Q8NGP8 315 aa8.17□□□□□ -1.1
DDB1-211ENST00000538280 OR2Y1Q8NGV0 311 aa8.17□□□□□ -1.1
DDB1-211ENST00000538280 SNIP1Q8TAD8 396 aaKnown RBP8.17□□□□□ -1.1
DDB1-211ENST00000538280 SSC4DQ8WTU2 575 aa8.17□□□□□ -1.1
DDB1-211ENST00000538280 MARVELD3Q96A59 401 aa8.17□□□□□ -1.1
DDB1-211ENST00000538280 PNPLA2Q96AD5 504 aa8.17□□□□□ -1.1
DDB1-211ENST00000538280 TMEM41AQ96HV5 264 aa8.17□□□□□ -1.1
DDB1-211ENST00000538280 NKX3-1Q99801 234 aaPredicted RBP8.17□□□□□ -1.1
DDB1-211ENST00000538280 SLC25A21Q9BQT8 299 aaPredicted RBP8.17□□□□□ -1.1
DDB1-211ENST00000538280 CNTD2Q9H8S5 307 aa8.17□□□□□ -1.1
DDB1-211ENST00000538280 TMEM138Q9NPI0 162 aa8.17□□□□□ -1.1
DDB1-211ENST00000538280 UPB1Q9UBR1 384 aa8.17□□□□□ -1.1
DDB1-211ENST00000538280 ZNF69Q9UC07 566 aa8.17□□□□□ -1.1
DDB1-211ENST00000538280 PHF3Q92576 2039 aaKnown RBP8.17□□□□□ -1.1
DDB1-211ENST00000538280 FREM3P0C091 2139 aa8.17□□□□□ -1.1
DDB1-211ENST00000538280 UBE2QL1A1L167 161 aa8.16□□□□□ -1.1
DDB1-211ENST00000538280 MEIS3P1A6NDR6 274 aa8.16□□□□□ -1.1
DDB1-211ENST00000538280 HMSDA8MTL9 139 aa8.16□□□□□ -1.1
DDB1-211ENST00000538280 B4E171 279 aa8.16□□□□□ -1.1
DDB1-211ENST00000538280 C9J4A7 227 aa8.16□□□□□ -1.1
DDB1-211ENST00000538280 H3BUI4 141 aa8.16□□□□□ -1.1
DDB1-211ENST00000538280 RAB3DO95716 219 aa8.16□□□□□ -1.1
DDB1-211ENST00000538280 IGHEP01854 428 aa8.16□□□□□ -1.1
DDB1-211ENST00000538280 KLK3P07288 261 aaPredicted RBP8.16□□□□□ -1.1
DDB1-211ENST00000538280 VSIG8P0DPA2 414 aa8.16□□□□□ -1.1
DDB1-211ENST00000538280 CCL3P10147 92 aa8.16□□□□□ -1.1
DDB1-211ENST00000538280 ZNF43P17038 809 aa8.16□□□□□ -1.1
DDB1-211ENST00000538280 CXCL2P19875 107 aa8.16□□□□□ -1.1
DDB1-211ENST00000538280 KLK2P20151 261 aa8.16□□□□□ -1.1
DDB1-211ENST00000538280 RAB3AP20336 220 aa8.16□□□□□ -1.1
DDB1-211ENST00000538280 TSPAN7P41732 249 aa8.16□□□□□ -1.1
DDB1-211ENST00000538280 OR3A3P47888 321 aa8.16□□□□□ -1.1
DDB1-211ENST00000538280 ZNF81P51508 661 aa8.16□□□□□ -1.1
DDB1-211ENST00000538280 DSCR4P56555 118 aaPredicted RBP8.16□□□□□ -1.1
DDB1-211ENST00000538280 MLF1P58340 268 aa8.16□□□□□ -1.1
DDB1-211ENST00000538280 TSPAN5P62079 268 aa8.16□□□□□ -1.1
DDB1-211ENST00000538280 CXADRP78310 365 aa8.16□□□□□ -1.1
DDB1-211ENST00000538280 GABREP78334 506 aa8.16□□□□□ -1.1
DDB1-211ENST00000538280 SRSF4Q08170 494 aaKnown RBP8.16□□□□□ -1.1
DDB1-211ENST00000538280 CHAF1BQ13112 559 aa8.16□□□□□ -1.1
DDB1-211ENST00000538280 RTP5Q14D33 572 aa8.16□□□□□ -1.1
DDB1-211ENST00000538280 C2orf68Q2NKX9 166 aa8.16□□□□□ -1.1
DDB1-211ENST00000538280 TMEM176BQ3YBM2 270 aaPredicted RBP8.16□□□□□ -1.1
DDB1-211ENST00000538280 THOC7Q6I9Y2 204 aaKnown RBP8.16□□□□□ -1.1
DDB1-211ENST00000538280 SPACA3Q8IXA5 215 aa8.16□□□□□ -1.1
DDB1-211ENST00000538280 GALNT16Q8N428 558 aa8.16□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms