RNA–Protein interactions for RNA: ENST00000537408.1

CLSTN3-207, Transcript of calsyntenin 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CLSTN3, Length 4,296 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-207ENST00000537408 COMMD4Q9H0A8 199 aa9.79□□□□□ -0.84
CLSTN3-207ENST00000537408 PRAMEF4O60810 478 aa9.79□□□□□ -0.84
CLSTN3-207ENST00000537408 SCGNO76038 276 aa9.79□□□□□ -0.84
CLSTN3-207ENST00000537408 NXPH2O95156 264 aa9.79□□□□□ -0.84
CLSTN3-207ENST00000537408 IFNA6P05013 189 aa9.79□□□□□ -0.84
CLSTN3-207ENST00000537408 GABRG2P18507 467 aa9.79□□□□□ -0.84
CLSTN3-207ENST00000537408 ZBTB25P24278 435 aa9.79□□□□□ -0.84
CLSTN3-207ENST00000537408 LSSP48449 732 aa9.79□□□□□ -0.84
CLSTN3-207ENST00000537408 FOXC1Q12948 553 aa9.79□□□□□ -0.84
CLSTN3-207ENST00000537408 PRAMEF9Q5VWM5 478 aa9.79□□□□□ -0.84
CLSTN3-207ENST00000537408 RPUSD3Q6P087 351 aaKnown RBP9.79□□□□□ -0.84
CLSTN3-207ENST00000537408 FAHD2BQ6P2I3 314 aaPredicted RBP9.79□□□□□ -0.84
CLSTN3-207ENST00000537408 UNQ9370/PRO34162Q6UXP9 181 aa9.79□□□□□ -0.84
CLSTN3-207ENST00000537408 BIVMQ86UB2 503 aa9.79□□□□□ -0.84
CLSTN3-207ENST00000537408 PAQR4Q8N4S7 273 aaPredicted RBP9.79□□□□□ -0.84
CLSTN3-207ENST00000537408 OR4K15Q8NH41 348 aa9.79□□□□□ -0.84
CLSTN3-207ENST00000537408 FAHD2AQ96GK7 314 aa9.79□□□□□ -0.84
CLSTN3-207ENST00000537408 JSRP1Q96MG2 331 aaPredicted RBP9.79□□□□□ -0.84
CLSTN3-207ENST00000537408 WFDC6Q9BQY6 131 aa9.79□□□□□ -0.84
CLSTN3-207ENST00000537408 SMDT1Q9H4I9 107 aa9.79□□□□□ -0.84
CLSTN3-207ENST00000537408 ADGRL4Q9HBW9 690 aa9.79□□□□□ -0.84
CLSTN3-207ENST00000537408 LHX3Q9UBR4 397 aa9.79□□□□□ -0.84
CLSTN3-207ENST00000537408 IGLON5A6NGN9 336 aa9.79□□□□□ -0.84
CLSTN3-207ENST00000537408 OR2T7P0C7T2 308 aa9.79□□□□□ -0.84
CLSTN3-207ENST00000537408 CD22P20273 847 aa9.79□□□□□ -0.84
CLSTN3-207ENST00000537408 CCKARP32238 428 aa9.79□□□□□ -0.84
CLSTN3-207ENST00000537408 LASP1Q14847 261 aaKnown RBP9.79□□□□□ -0.84
CLSTN3-207ENST00000537408 ARHGAP19Q14CB8 494 aa9.79□□□□□ -0.84
CLSTN3-207ENST00000537408 GXYLT1Q4G148 440 aa9.79□□□□□ -0.84
CLSTN3-207ENST00000537408 DNM1P46Q6ZS02 220 aa9.79□□□□□ -0.84
CLSTN3-207ENST00000537408 OR2T27Q8NH04 317 aa9.79□□□□□ -0.84
CLSTN3-207ENST00000537408 HPSE2Q8WWQ2 592 aa9.79□□□□□ -0.84
CLSTN3-207ENST00000537408 LPAR2Q9HBW0 351 aa9.79□□□□□ -0.84
CLSTN3-207ENST00000537408 SERINC1Q9NRX5 453 aa9.79□□□□□ -0.84
CLSTN3-207ENST00000537408 KCNK6Q9Y257 313 aa9.79□□□□□ -0.84
CLSTN3-207ENST00000537408 HS3ST2Q9Y278 367 aa9.79□□□□□ -0.84
CLSTN3-207ENST00000537408 STRAPQ9Y3F4 350 aaKnown RBP9.79□□□□□ -0.84
CLSTN3-207ENST00000537408 CNOT1A5YKK6 2376 aaKnown RBP9.79□□□□□ -0.84
CLSTN3-207ENST00000537408 A0A1W2PN81 502 aa9.79□□□□□ -0.84
CLSTN3-207ENST00000537408 METTL12A8MUP2 240 aa9.79□□□□□ -0.84
CLSTN3-207ENST00000537408 TGFB1P01137 390 aa9.79□□□□□ -0.84
CLSTN3-207ENST00000537408 TACR3P29371 465 aa9.79□□□□□ -0.84
CLSTN3-207ENST00000537408 CHRNA7P36544 502 aa9.79□□□□□ -0.84
CLSTN3-207ENST00000537408 TAS2R38P59533 333 aa9.79□□□□□ -0.84
CLSTN3-207ENST00000537408 RAP1BP61224 184 aa9.79□□□□□ -0.84
CLSTN3-207ENST00000537408 VAMP2P63027 116 aa9.79□□□□□ -0.84
CLSTN3-207ENST00000537408 ELOBQ15370 118 aa9.79□□□□□ -0.84
CLSTN3-207ENST00000537408 FAM189A2Q15884 450 aa9.79□□□□□ -0.84
CLSTN3-207ENST00000537408 CHRFAM7AQ494W8 412 aa9.79□□□□□ -0.84
CLSTN3-207ENST00000537408 STAC2Q6ZMT1 411 aa9.79□□□□□ -0.84
CLSTN3-207ENST00000537408 SLC35F2Q8IXU6 374 aa9.79□□□□□ -0.84
CLSTN3-207ENST00000537408 KDM8Q8N371 416 aa9.79□□□□□ -0.84
CLSTN3-207ENST00000537408 ZDHHC22Q8N966 263 aa9.79□□□□□ -0.84
CLSTN3-207ENST00000537408 FRZBQ92765 325 aa9.79□□□□□ -0.84
CLSTN3-207ENST00000537408 RSPRY1Q96DX4 576 aa9.79□□□□□ -0.84
CLSTN3-207ENST00000537408 PELI1Q96FA3 418 aa9.79□□□□□ -0.84
CLSTN3-207ENST00000537408 CHST11Q9NPF2 352 aa9.79□□□□□ -0.84
CLSTN3-207ENST00000537408 TGIF2-C20orf24A0A0A6YYL0 155 aa9.78□□□□□ -0.84
CLSTN3-207ENST00000537408 IGLV3-27P01718 113 aa9.78□□□□□ -0.84
CLSTN3-207ENST00000537408 OPN1LWP04000 364 aa9.78□□□□□ -0.84
CLSTN3-207ENST00000537408 SLC2A5P22732 501 aa9.78□□□□□ -0.84
CLSTN3-207ENST00000537408 CXCR1P25024 350 aa9.78□□□□□ -0.84
CLSTN3-207ENST00000537408 RPL4P36578 427 aaKnown RBP9.78□□□□□ -0.84
CLSTN3-207ENST00000537408 PSMB10P40306 273 aa9.78□□□□□ -0.84
CLSTN3-207ENST00000537408 CCR5P51681 352 aa9.78□□□□□ -0.84
CLSTN3-207ENST00000537408 Q6ZNB5 142 aa9.78□□□□□ -0.84
CLSTN3-207ENST00000537408 NUDT10Q8NFP7 164 aa9.78□□□□□ -0.84
CLSTN3-207ENST00000537408 METTL21AQ8WXB1 218 aa9.78□□□□□ -0.84
CLSTN3-207ENST00000537408 CLDN23Q96B33 292 aa9.78□□□□□ -0.84
CLSTN3-207ENST00000537408 PDFQ9HBH1 243 aa9.78□□□□□ -0.84
CLSTN3-207ENST00000537408 IL26Q9NPH9 171 aa9.78□□□□□ -0.84
CLSTN3-207ENST00000537408 CMC2Q9NRP2 79 aa9.78□□□□□ -0.84
CLSTN3-207ENST00000537408 RPH3ALQ9UNE2 315 aa9.78□□□□□ -0.84
CLSTN3-207ENST00000537408 GPR34Q9UPC5 381 aa9.78□□□□□ -0.84
CLSTN3-207ENST00000537408 TSPAN11A1L157 253 aa9.78□□□□□ -0.84
CLSTN3-207ENST00000537408 AHSA1O95433 338 aa9.78□□□□□ -0.84
CLSTN3-207ENST00000537408 TMIGD3P0DMS9 266 aaPredicted RBP9.78□□□□□ -0.84
CLSTN3-207ENST00000537408 RPS15P62841 145 aaKnown RBP9.78□□□□□ -0.84
CLSTN3-207ENST00000537408 FBXW9Q5XUX1 488 aa9.78□□□□□ -0.84
CLSTN3-207ENST00000537408 HMGN2P46Q86SG4 172 aa9.78□□□□□ -0.84
CLSTN3-207ENST00000537408 OR1N1Q8NGS0 311 aa9.78□□□□□ -0.84
CLSTN3-207ENST00000537408 RERGQ96A58 199 aaPredicted RBP9.78□□□□□ -0.84
CLSTN3-207ENST00000537408 MCHR1Q99705 422 aa9.78□□□□□ -0.84
CLSTN3-207ENST00000537408 TIMP4Q99727 224 aa9.78□□□□□ -0.84
CLSTN3-207ENST00000537408 GOLGB1Q14789 3259 aaKnown RBP9.78□□□□□ -0.84
CLSTN3-207ENST00000537408 CTAG2O75638 210 aa9.78□□□□□ -0.84
CLSTN3-207ENST00000537408 DUS4LO95620 317 aaKnown RBP9.78□□□□□ -0.84
CLSTN3-207ENST00000537408 YPEL5P62699 121 aa9.78□□□□□ -0.84
CLSTN3-207ENST00000537408 HYAL4Q2M3T9 481 aa9.78□□□□□ -0.84
CLSTN3-207ENST00000537408 EXOSC6Q5RKV6 272 aaKnown RBP9.78□□□□□ -0.84
CLSTN3-207ENST00000537408 SLC25A24Q6NUK1 477 aa9.78□□□□□ -0.84
CLSTN3-207ENST00000537408 AGTRAPQ6RW13 159 aa9.78□□□□□ -0.84
CLSTN3-207ENST00000537408 Q6ZSR6 202 aa9.78□□□□□ -0.84
CLSTN3-207ENST00000537408 MRGPRDQ8TDS7 321 aa9.78□□□□□ -0.84
CLSTN3-207ENST00000537408 NIPSNAP3BQ9BS92 247 aa9.78□□□□□ -0.84
CLSTN3-207ENST00000537408 FAAP24Q9BTP7 215 aa9.78□□□□□ -0.84
CLSTN3-207ENST00000537408 EFCAB11Q9BUY7 163 aa9.78□□□□□ -0.84
CLSTN3-207ENST00000537408 PIEZO1Q92508 2521 aa9.77□□□□□ -0.84
CLSTN3-207ENST00000537408 ZNF727A8MUV8 499 aa9.77□□□□□ -0.84
CLSTN3-207ENST00000537408 ZNF705FA8MVS1 300 aaPredicted RBP9.77□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms