RNA–Protein interactions for RNA: ENST00000537178.5

CLIP1-209, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CLIP1, Length 5,229 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-209ENST00000537178 HNRNPA3P51991 378 aaKnown RBP9.68□□□□□ -0.86
CLIP1-209ENST00000537178 OR5I1Q13606 314 aa9.68□□□□□ -0.86
CLIP1-209ENST00000537178 NKAIN2Q5VXU1 208 aa9.68□□□□□ -0.86
CLIP1-209ENST00000537178 DEFB108BQ8NET1 73 aa9.68□□□□□ -0.86
CLIP1-209ENST00000537178 OR13H1Q8NG92 308 aa9.68□□□□□ -0.86
CLIP1-209ENST00000537178 SLC37A2Q8TED4 501 aa9.68□□□□□ -0.86
CLIP1-209ENST00000537178 ST8SIA1Q92185 356 aa9.68□□□□□ -0.86
CLIP1-209ENST00000537178 ARHGDIGQ99819 225 aa9.68□□□□□ -0.86
CLIP1-209ENST00000537178 PLRG1O43660 514 aaKnown RBP9.67□□□□□ -0.86
CLIP1-209ENST00000537178 HSBP1O75506 76 aa9.67□□□□□ -0.86
CLIP1-209ENST00000537178 CNMDO75829 334 aa9.67□□□□□ -0.86
CLIP1-209ENST00000537178 ACSM4P0C7M7 580 aa9.67□□□□□ -0.86
CLIP1-209ENST00000537178 OR5H8P0DN80 308 aa9.67□□□□□ -0.86
CLIP1-209ENST00000537178 ABCD3P28288 659 aa9.67□□□□□ -0.86
CLIP1-209ENST00000537178 DGCR2P98153 550 aa9.67□□□□□ -0.86
CLIP1-209ENST00000537178 METRNLQ641Q3 311 aa9.67□□□□□ -0.86
CLIP1-209ENST00000537178 TIGD3Q6B0B8 471 aa9.67□□□□□ -0.86
CLIP1-209ENST00000537178 TMEM99Q8N816 258 aa9.67□□□□□ -0.86
CLIP1-209ENST00000537178 C2CD4CQ8TF44 421 aa9.67□□□□□ -0.86
CLIP1-209ENST00000537178 MRPS24Q96EL2 167 aaKnown RBP9.67□□□□□ -0.86
CLIP1-209ENST00000537178 ACER3Q9NUN7 267 aa9.67□□□□□ -0.86
CLIP1-209ENST00000537178 ZNF230Q9UIE0 474 aaPredicted RBP9.67□□□□□ -0.86
CLIP1-209ENST00000537178 ZNF835Q9Y2P0 537 aa9.67□□□□□ -0.86
CLIP1-209ENST00000537178 ATP23Q9Y6H3 246 aa9.67□□□□□ -0.86
CLIP1-209ENST00000537178 SNRPGP15A8MWD9 76 aa9.67□□□□□ -0.86
CLIP1-209ENST00000537178 TAPBPO15533 448 aa9.67□□□□□ -0.86
CLIP1-209ENST00000537178 SSSCA1O60232 199 aa9.67□□□□□ -0.86
CLIP1-209ENST00000537178 SMIM17P0DL12 118 aa9.67□□□□□ -0.86
CLIP1-209ENST00000537178 VEGFBP49765 207 aa9.67□□□□□ -0.86
CLIP1-209ENST00000537178 OR2B8PP59922 312 aa9.67□□□□□ -0.86
CLIP1-209ENST00000537178 NCR3LG1Q68D85 454 aa9.67□□□□□ -0.86
CLIP1-209ENST00000537178 NLRC3Q7RTR2 1065 aa9.67□□□□□ -0.86
CLIP1-209ENST00000537178 UBAC2Q8NBM4 344 aa9.67□□□□□ -0.86
CLIP1-209ENST00000537178 ASB13Q8WXK3 278 aa9.67□□□□□ -0.86
CLIP1-209ENST00000537178 SLC39A7Q92504 469 aa9.67□□□□□ -0.86
CLIP1-209ENST00000537178 CMBLQ96DG6 245 aa9.67□□□□□ -0.86
CLIP1-209ENST00000537178 FAM103A1Q9BTL3 118 aaKnown RBP9.67□□□□□ -0.86
CLIP1-209ENST00000537178 ZDHHC11Q9H8X9 412 aa9.67□□□□□ -0.86
CLIP1-209ENST00000537178 CBY1Q9Y3M2 126 aa9.67□□□□□ -0.86
CLIP1-209ENST00000537178 SIRPB1O00241 398 aa9.67□□□□□ -0.86
CLIP1-209ENST00000537178 NRG2O14511 850 aaPredicted RBP9.67□□□□□ -0.86
CLIP1-209ENST00000537178 PPICP45877 212 aa9.67□□□□□ -0.86
CLIP1-209ENST00000537178 SHBQ15464 509 aa9.67□□□□□ -0.86
CLIP1-209ENST00000537178 TRMT12Q53H54 448 aaKnown RBP9.67□□□□□ -0.86
CLIP1-209ENST00000537178 LAIR1Q6GTX8 287 aa9.67□□□□□ -0.86
CLIP1-209ENST00000537178 YRDCQ86U90 279 aaKnown RBP9.67□□□□□ -0.86
CLIP1-209ENST00000537178 MFSD4AQ8N468 514 aa9.67□□□□□ -0.86
CLIP1-209ENST00000537178 C11orf42Q8N5U0 333 aa9.67□□□□□ -0.86
CLIP1-209ENST00000537178 NECAP1Q8NC96 275 aa9.67□□□□□ -0.86
CLIP1-209ENST00000537178 ATOH1Q92858 354 aaPredicted RBP9.67□□□□□ -0.86
CLIP1-209ENST00000537178 PINX1Q96BK5 328 aaKnown RBP9.67□□□□□ -0.86
CLIP1-209ENST00000537178 MS4A6EQ96DS6 147 aa9.67□□□□□ -0.86
CLIP1-209ENST00000537178 C2orf50Q96LR7 162 aa9.67□□□□□ -0.86
CLIP1-209ENST00000537178 FYTTD1Q96QD9 318 aaKnown RBP9.67□□□□□ -0.86
CLIP1-209ENST00000537178 SLC17A4Q9Y2C5 497 aa9.67□□□□□ -0.86
CLIP1-209ENST00000537178 TRIP11Q15643 1979 aa9.67□□□□□ -0.86
CLIP1-209ENST00000537178 LRP3O75074 770 aa9.67□□□□□ -0.86
CLIP1-209ENST00000537178 PNPP00491 289 aa9.67□□□□□ -0.86
CLIP1-209ENST00000537178 RAB5AP20339 215 aa9.67□□□□□ -0.86
CLIP1-209ENST00000537178 OPRM1P35372 400 aa9.67□□□□□ -0.86
CLIP1-209ENST00000537178 CNN1P51911 297 aaKnown RBP9.67□□□□□ -0.86
CLIP1-209ENST00000537178 EGR3Q06889 387 aa9.67□□□□□ -0.86
CLIP1-209ENST00000537178 SAXO2Q658L1 398 aa9.67□□□□□ -0.86
CLIP1-209ENST00000537178 C6orf15Q6UXA7 325 aaPredicted RBP9.67□□□□□ -0.86
CLIP1-209ENST00000537178 OLIG3Q7RTU3 272 aa9.67□□□□□ -0.86
CLIP1-209ENST00000537178 ZNF561Q8N587 486 aa9.67□□□□□ -0.86
CLIP1-209ENST00000537178 SLX1AQ9BQ83 275 aa9.67□□□□□ -0.86
CLIP1-209ENST00000537178 LAT2Q9GZY6 243 aa9.67□□□□□ -0.86
CLIP1-209ENST00000537178 TUBB1Q9H4B7 451 aa9.67□□□□□ -0.86
CLIP1-209ENST00000537178 GPR84Q9NQS5 396 aa9.67□□□□□ -0.86
CLIP1-209ENST00000537178 CHST2Q9Y4C5 530 aa9.67□□□□□ -0.86
CLIP1-209ENST00000537178 GABRB1P18505 474 aa9.66□□□□□ -0.86
CLIP1-209ENST00000537178 SMUG1Q53HV7 270 aa9.66□□□□□ -0.86
CLIP1-209ENST00000537178 OR2B11Q5JQS5 317 aa9.66□□□□□ -0.86
CLIP1-209ENST00000537178 RBM45Q8IUH3 476 aaKnown RBP9.66□□□□□ -0.86
CLIP1-209ENST00000537178 ZNF485Q8NCK3 441 aa9.66□□□□□ -0.86
CLIP1-209ENST00000537178 OR2T6Q8NHC8 308 aa9.66□□□□□ -0.86
CLIP1-209ENST00000537178 UBE2FQ969M7 185 aa9.66□□□□□ -0.86
CLIP1-209ENST00000537178 MRPL22Q9NWU5 206 aaKnown RBP9.66□□□□□ -0.86
CLIP1-209ENST00000537178 PROCRQ9UNN8 238 aa9.66□□□□□ -0.86
CLIP1-209ENST00000537178 SLC5A6Q9Y289 635 aa9.66□□□□□ -0.86
CLIP1-209ENST00000537178 SDCBPO00560 298 aaPredicted RBP9.66□□□□□ -0.86
CLIP1-209ENST00000537178 SLC25A4P12235 298 aa9.66□□□□□ -0.86
CLIP1-209ENST00000537178 GNB2P62879 340 aa9.66□□□□□ -0.86
CLIP1-209ENST00000537178 XKR7Q5GH72 579 aa9.66□□□□□ -0.86
CLIP1-209ENST00000537178 TRNP1Q6NT89 227 aa9.66□□□□□ -0.86
CLIP1-209ENST00000537178 PLPP6Q8IY26 295 aa9.66□□□□□ -0.86
CLIP1-209ENST00000537178 ZFP62Q8NB50 900 aaPredicted RBP9.66□□□□□ -0.86
CLIP1-209ENST00000537178 OR5AP2Q8NGF4 316 aa9.66□□□□□ -0.86
CLIP1-209ENST00000537178 RXFP4Q8TDU9 374 aa9.66□□□□□ -0.86
CLIP1-209ENST00000537178 TAAR6Q96RI8 345 aa9.66□□□□□ -0.86
CLIP1-209ENST00000537178 ZNF236Q9UL36 1845 aa9.66□□□□□ -0.86
CLIP1-209ENST00000537178 A0A1W2PPQ1 181 aa9.66□□□□□ -0.86
CLIP1-209ENST00000537178 IDSB3KWA1 339 aa9.66□□□□□ -0.86
CLIP1-209ENST00000537178 GPR31O00270 319 aa9.66□□□□□ -0.86
CLIP1-209ENST00000537178 TERTO14746 1132 aaKnown RBP9.66□□□□□ -0.86
CLIP1-209ENST00000537178 TMEM127O75204 238 aa9.66□□□□□ -0.86
CLIP1-209ENST00000537178 HIST1H1CP16403 213 aaKnown RBP9.66□□□□□ -0.86
CLIP1-209ENST00000537178 AMTP48728 403 aa9.66□□□□□ -0.86
CLIP1-209ENST00000537178 OR1D5P58170 312 aa9.66□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms