RNA–Protein interactions for RNA: ENST00000534442.5

ECHDC1-223, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 5

Gene ECHDC1, Length 577 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-223ENST00000534442 LEMD1Q68G75 181 aa3.38□□□□□ -1.87
ECHDC1-223ENST00000534442 ATL3Q6DD88 541 aa3.38□□□□□ -1.87
ECHDC1-223ENST00000534442 SBSNQ6UWP8 590 aa3.38□□□□□ -1.87
ECHDC1-223ENST00000534442 GPRIN3Q6ZVF9 776 aa3.38□□□□□ -1.87
ECHDC1-223ENST00000534442 LRRC49Q8IUZ0 686 aa3.38□□□□□ -1.87
ECHDC1-223ENST00000534442 ZNF786Q8N393 782 aa3.38□□□□□ -1.87
ECHDC1-223ENST00000534442 CSNK1G2-AS1Q8NCQ2 148 aa3.38□□□□□ -1.87
ECHDC1-223ENST00000534442 OR2L3Q8NG85 312 aa3.38□□□□□ -1.87
ECHDC1-223ENST00000534442 OR52M1Q8NGK5 317 aa3.38□□□□□ -1.87
ECHDC1-223ENST00000534442 SLC5A11Q8WWX8 675 aa3.38□□□□□ -1.87
ECHDC1-223ENST00000534442 OR2A5Q96R48 311 aa3.38□□□□□ -1.87
ECHDC1-223ENST00000534442 VGLL1Q99990 258 aa3.38□□□□□ -1.87
ECHDC1-223ENST00000534442 TM2D3Q9BRN9 247 aa3.38□□□□□ -1.87
ECHDC1-223ENST00000534442 DOHHQ9BU89 302 aa3.38□□□□□ -1.87
ECHDC1-223ENST00000534442 GPR61Q9BZJ8 451 aa3.38□□□□□ -1.87
ECHDC1-223ENST00000534442 GFRA4Q9GZZ7 299 aa3.38□□□□□ -1.87
ECHDC1-223ENST00000534442 RACGAP1Q9H0H5 632 aa3.38□□□□□ -1.87
ECHDC1-223ENST00000534442 GORASP2Q9H8Y8 452 aa3.38□□□□□ -1.87
ECHDC1-223ENST00000534442 ZNF223Q9UK11 482 aaPredicted RBP3.38□□□□□ -1.87
ECHDC1-223ENST00000534442 SNX6Q9UNH7 406 aa3.38□□□□□ -1.87
ECHDC1-223ENST00000534442 HEATR5BQ9P2D3 2071 aa3.38□□□□□ -1.87
ECHDC1-223ENST00000534442 IGHV3OR16-12A0A075B7B8 117 aa3.37□□□□□ -1.87
ECHDC1-223ENST00000534442 UQCRHLA0A096LP55 91 aa3.37□□□□□ -1.87
ECHDC1-223ENST00000534442 IGKV3D-11A0A0A0MRZ8 115 aa3.37□□□□□ -1.87
ECHDC1-223ENST00000534442 A0A0J9YWU9 116 aa3.37□□□□□ -1.87
ECHDC1-223ENST00000534442 FAM74A7A6NL05 159 aa3.37□□□□□ -1.87
ECHDC1-223ENST00000534442 SIGLEC16A6NMB1 481 aa3.37□□□□□ -1.87
ECHDC1-223ENST00000534442 PPIAL4DF5H284 164 aa3.37□□□□□ -1.87
ECHDC1-223ENST00000534442 K7EQM0 130 aa3.37□□□□□ -1.87
ECHDC1-223ENST00000534442 LIN7AO14910 233 aaPredicted RBP3.37□□□□□ -1.87
ECHDC1-223ENST00000534442 TRIM3O75382 744 aaPredicted RBP3.37□□□□□ -1.87
ECHDC1-223ENST00000534442 MYO1DO94832 1006 aa3.37□□□□□ -1.87
ECHDC1-223ENST00000534442 ANP32DO95626 131 aa3.37□□□□□ -1.87
ECHDC1-223ENST00000534442 MT-ND1P03886 318 aa3.37□□□□□ -1.87
ECHDC1-223ENST00000534442 OPN1LWP04000 364 aa3.37□□□□□ -1.87
ECHDC1-223ENST00000534442 IGF1P05019 195 aa3.37□□□□□ -1.87
ECHDC1-223ENST00000534442 ATP1B2P14415 290 aaPredicted RBP3.37□□□□□ -1.87
ECHDC1-223ENST00000534442 RPA2P15927 270 aa3.37□□□□□ -1.87
ECHDC1-223ENST00000534442 IL1RNP18510 177 aa3.37□□□□□ -1.87
ECHDC1-223ENST00000534442 NT5EP21589 574 aa3.37□□□□□ -1.87
ECHDC1-223ENST00000534442 MT3P25713 68 aa3.37□□□□□ -1.87
ECHDC1-223ENST00000534442 TMED10P49755 219 aaKnown RBP3.37□□□□□ -1.87
ECHDC1-223ENST00000534442 RGS4P49798 205 aa3.37□□□□□ -1.87
ECHDC1-223ENST00000534442 KLK7P49862 253 aa3.37□□□□□ -1.87
ECHDC1-223ENST00000534442 ARHGDIAP52565 204 aa3.37□□□□□ -1.87
ECHDC1-223ENST00000534442 GBX2P52951 348 aaPredicted RBP3.37□□□□□ -1.87
ECHDC1-223ENST00000534442 ERVK11-1P61568 191 aa3.37□□□□□ -1.87
ECHDC1-223ENST00000534442 SNRPD2P62316 118 aaKnown RBP3.37□□□□□ -1.87
ECHDC1-223ENST00000534442 PJVKQ0ZLH3 352 aa3.37□□□□□ -1.87
ECHDC1-223ENST00000534442 CHIT1Q13231 466 aa3.37□□□□□ -1.87
ECHDC1-223ENST00000534442 SELPLGQ14242 412 aa3.37□□□□□ -1.87
ECHDC1-223ENST00000534442 FCN2Q15485 313 aa3.37□□□□□ -1.87
ECHDC1-223ENST00000534442 SNAI3Q3KNW1 292 aa3.37□□□□□ -1.87
ECHDC1-223ENST00000534442 FAM74A3Q4VXF1 159 aa3.37□□□□□ -1.87
ECHDC1-223ENST00000534442 ZCWPW2Q504Y3 356 aa3.37□□□□□ -1.87
ECHDC1-223ENST00000534442 SLX4IPQ5VYV7 408 aa3.37□□□□□ -1.87
ECHDC1-223ENST00000534442 LGALS9CQ6DKI2 356 aa3.37□□□□□ -1.87
ECHDC1-223ENST00000534442 PYHIN1Q6K0P9 492 aa3.37□□□□□ -1.87
ECHDC1-223ENST00000534442 PAQR6Q6TCH4 344 aa3.37□□□□□ -1.87
ECHDC1-223ENST00000534442 HSDL2Q6YN16 418 aa3.37□□□□□ -1.87
ECHDC1-223ENST00000534442 DPY19L4Q7Z388 723 aa3.37□□□□□ -1.87
ECHDC1-223ENST00000534442 NDUFA11Q86Y39 141 aa3.37□□□□□ -1.87
ECHDC1-223ENST00000534442 ZNF440Q8IYI8 595 aa3.37□□□□□ -1.87
ECHDC1-223ENST00000534442 C17orf47Q8NEP4 570 aa3.37□□□□□ -1.87
ECHDC1-223ENST00000534442 BEST4Q8NFU0 473 aa3.37□□□□□ -1.87
ECHDC1-223ENST00000534442 JOSD2Q8TAC2 188 aa3.37□□□□□ -1.87
ECHDC1-223ENST00000534442 ZNF671Q8TAW3 534 aa3.37□□□□□ -1.87
ECHDC1-223ENST00000534442 AKR1E2Q96JD6 320 aa3.37□□□□□ -1.87
ECHDC1-223ENST00000534442 TRIB3Q96RU7 358 aa3.37□□□□□ -1.87
ECHDC1-223ENST00000534442 ZNF607Q96SK3 696 aa3.37□□□□□ -1.87
ECHDC1-223ENST00000534442 DPH7Q9BTV6 452 aa3.37□□□□□ -1.87
ECHDC1-223ENST00000534442 ALG12Q9BV10 488 aa3.37□□□□□ -1.87
ECHDC1-223ENST00000534442 DHX35Q9H5Z1 703 aaKnown RBP3.37□□□□□ -1.87
ECHDC1-223ENST00000534442 PROK2Q9HC23 129 aa3.37□□□□□ -1.87
ECHDC1-223ENST00000534442 ANKHQ9HCJ1 492 aa3.37□□□□□ -1.87
ECHDC1-223ENST00000534442 AMBNQ9NP70 447 aa3.37□□□□□ -1.87
ECHDC1-223ENST00000534442 RBM22Q9NW64 420 aaKnown RBP eCLIP3.37□□□□□ -1.877e-6■■■■□ 24.6
ECHDC1-223ENST00000534442 EXTL2Q9UBQ6 330 aa3.37□□□□□ -1.87
ECHDC1-223ENST00000534442 GSTK1Q9Y2Q3 226 aa3.37□□□□□ -1.87
ECHDC1-223ENST00000534442 LRP1Q07954 4544 aaKnown RBP3.36□□□□□ -1.87
ECHDC1-223ENST00000534442 PPIAL4CA0A0B4J2A2 164 aa3.36□□□□□ -1.87
ECHDC1-223ENST00000534442 TRBV7-9A0A0J9YWB2 115 aa3.36□□□□□ -1.87
ECHDC1-223ENST00000534442 ZSCAN5BA6NJL1 495 aa3.36□□□□□ -1.87
ECHDC1-223ENST00000534442 RTL8CO15255 209 aa3.36□□□□□ -1.87
ECHDC1-223ENST00000534442 ZSCAN12O43309 604 aa3.36□□□□□ -1.87
ECHDC1-223ENST00000534442 GMFGO60234 142 aa3.36□□□□□ -1.87
ECHDC1-223ENST00000534442 BCAS1O75363 584 aaPredicted RBP3.36□□□□□ -1.87
ECHDC1-223ENST00000534442 RDH16O75452 317 aa3.36□□□□□ -1.87
ECHDC1-223ENST00000534442 LSM8O95777 96 aaKnown RBP3.36□□□□□ -1.87
ECHDC1-223ENST00000534442 RPN2P04844 631 aa3.36□□□□□ -1.87
ECHDC1-223ENST00000534442 IGFBP1P08833 259 aaPredicted RBP3.36□□□□□ -1.87
ECHDC1-223ENST00000534442 PPIAL4GP0DN37 164 aa3.36□□□□□ -1.87
ECHDC1-223ENST00000534442 UQCRC2P22695 453 aa3.36□□□□□ -1.87
ECHDC1-223ENST00000534442 PSMB5P28074 263 aa3.36□□□□□ -1.87
ECHDC1-223ENST00000534442 CMPK1P30085 196 aa3.36□□□□□ -1.87
ECHDC1-223ENST00000534442 CHI3L1P36222 383 aaPredicted RBP3.36□□□□□ -1.87
ECHDC1-223ENST00000534442 GPR6P46095 362 aaPredicted RBP3.36□□□□□ -1.87
ECHDC1-223ENST00000534442 HCAR3P49019 387 aa3.36□□□□□ -1.87
ECHDC1-223ENST00000534442 UBE2HP62256 183 aa3.36□□□□□ -1.87
ECHDC1-223ENST00000534442 BTG2P78543 158 aa3.36□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms