RNA–Protein interactions for RNA: ENST00000534082.1

CD44-237, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 2

Gene CD44, Length 564 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-237ENST00000534082 C10orf99Q6UWK7 81 aa5.15□□□□□ -1.59
CD44-237ENST00000534082 COLCA1Q6ZS62 124 aa5.15□□□□□ -1.59
CD44-237ENST00000534082 NANOGNBQ7Z5D8 188 aa5.15□□□□□ -1.59
CD44-237ENST00000534082 SLC30A8Q8IWU4 369 aa5.15□□□□□ -1.59
CD44-237ENST00000534082 PCYOX1LQ8NBM8 494 aa5.15□□□□□ -1.59
CD44-237ENST00000534082 ACMSDQ8TDX5 336 aa5.15□□□□□ -1.59
CD44-237ENST00000534082 LINC00476Q8WZB0 136 aa5.15□□□□□ -1.59
CD44-237ENST00000534082 H1FXQ92522 213 aaKnown RBP5.15□□□□□ -1.59
CD44-237ENST00000534082 SLC7A6Q92536 515 aa5.15□□□□□ -1.59
CD44-237ENST00000534082 TESCQ96BS2 214 aa5.15□□□□□ -1.59
CD44-237ENST00000534082 RASD2Q96D21 266 aa5.15□□□□□ -1.59
CD44-237ENST00000534082 LYZL4Q96KX0 146 aa5.15□□□□□ -1.59
CD44-237ENST00000534082 FAM210AQ96ND0 272 aa5.15□□□□□ -1.59
CD44-237ENST00000534082 PANX1Q96RD7 426 aa5.15□□□□□ -1.59
CD44-237ENST00000534082 CCL13Q99616 98 aa5.15□□□□□ -1.59
CD44-237ENST00000534082 WDR76Q9H967 626 aa5.15□□□□□ -1.59
CD44-237ENST00000534082 SLCO1B3Q9NPD5 702 aa5.15□□□□□ -1.59
CD44-237ENST00000534082 DCDC2Q9UHG0 476 aa5.15□□□□□ -1.59
CD44-237ENST00000534082 BTNL2Q9UIR0 455 aa5.15□□□□□ -1.59
CD44-237ENST00000534082 PITPNC1Q9UKF7 332 aa5.15□□□□□ -1.59
CD44-237ENST00000534082 PRPF19Q9UMS4 504 aaKnown RBP5.15□□□□□ -1.59
CD44-237ENST00000534082 ZNF256Q9Y2P7 627 aaPredicted RBP5.15□□□□□ -1.59
CD44-237ENST00000534082 SAR1BQ9Y6B6 198 aa5.15□□□□□ -1.59
CD44-237ENST00000534082 DNAH2Q9P225 4427 aa5.15□□□□□ -1.59
CD44-237ENST00000534082 A0A087WUV0 522 aaPredicted RBP5.14□□□□□ -1.59
CD44-237ENST00000534082 A0A1W2PPL8 197 aa5.14□□□□□ -1.59
CD44-237ENST00000534082 A0A1W2PQ09 198 aa5.14□□□□□ -1.59
CD44-237ENST00000534082 E9PBE3 544 aa5.14□□□□□ -1.59
CD44-237ENST00000534082 KPNA4O00629 521 aaPredicted RBP5.14□□□□□ -1.59
CD44-237ENST00000534082 SGCEO43556 437 aa5.14□□□□□ -1.59
CD44-237ENST00000534082 NDUFB3O43676 98 aa5.14□□□□□ -1.59
CD44-237ENST00000534082 SLC25A17O43808 307 aa5.14□□□□□ -1.59
CD44-237ENST00000534082 FMO6PO60774 539 aa5.14□□□□□ -1.59
CD44-237ENST00000534082 KRT75O95678 551 aa5.14□□□□□ -1.59
CD44-237ENST00000534082 LY86O95711 162 aa5.14□□□□□ -1.59
CD44-237ENST00000534082 FRMD6-AS1P0C7T7 363 aa5.14□□□□□ -1.59
CD44-237ENST00000534082 UMPSP11172 480 aa5.14□□□□□ -1.59
CD44-237ENST00000534082 NR2C1P13056 603 aa5.14□□□□□ -1.59
CD44-237ENST00000534082 MSR1P21757 451 aa5.14□□□□□ -1.59
CD44-237ENST00000534082 BGNP21810 368 aa5.14□□□□□ -1.59
CD44-237ENST00000534082 MYF6P23409 242 aa5.14□□□□□ -1.59
CD44-237ENST00000534082 PRKAR1BP31321 381 aa5.14□□□□□ -1.59
CD44-237ENST00000534082 MYCNOSP40205 109 aa5.14□□□□□ -1.59
CD44-237ENST00000534082 GSK3BP49841 420 aa5.14□□□□□ -1.59
CD44-237ENST00000534082 RAB13P51153 203 aa5.14□□□□□ -1.59
CD44-237ENST00000534082 MVDP53602 400 aa5.14□□□□□ -1.59
CD44-237ENST00000534082 RAB25P57735 213 aa5.14□□□□□ -1.59
CD44-237ENST00000534082 RGS8P57771 180 aaPredicted RBP5.14□□□□□ -1.59
CD44-237ENST00000534082 TAGLNQ01995 201 aaKnown RBP5.14□□□□□ -1.59
CD44-237ENST00000534082 EMX2Q04743 252 aa5.14□□□□□ -1.59
CD44-237ENST00000534082 SCRN3Q0VDG4 424 aa5.14□□□□□ -1.59
CD44-237ENST00000534082 BLMHQ13867 455 aa5.14□□□□□ -1.59
CD44-237ENST00000534082 OR1Q1Q15612 314 aa5.14□□□□□ -1.59
CD44-237ENST00000534082 DPY19L1Q2PZI1 675 aa5.14□□□□□ -1.59
CD44-237ENST00000534082 CCDC153Q494R4 210 aa5.14□□□□□ -1.59
CD44-237ENST00000534082 C4orf46Q504U0 113 aa5.14□□□□□ -1.59
CD44-237ENST00000534082 ARMC4Q5T2S8 1044 aa5.14□□□□□ -1.59
CD44-237ENST00000534082 C9orf66Q5T8R8 295 aa5.14□□□□□ -1.59
CD44-237ENST00000534082 HHATQ5VTY9 493 aa5.14□□□□□ -1.59
CD44-237ENST00000534082 TEX36Q5VZQ5 186 aa5.14□□□□□ -1.59
CD44-237ENST00000534082 SLC25A47Q6Q0C1 308 aa5.14□□□□□ -1.59
CD44-237ENST00000534082 ZNF621Q6ZSS3 439 aa5.14□□□□□ -1.59
CD44-237ENST00000534082 FOXL2NBQ6ZUU3 175 aa5.14□□□□□ -1.59
CD44-237ENST00000534082 C10orf107Q8IVU9 208 aa5.14□□□□□ -1.59
CD44-237ENST00000534082 GCSAMQ8N6F7 178 aa5.14□□□□□ -1.59
CD44-237ENST00000534082 SPATA4Q8NEY3 305 aa5.14□□□□□ -1.59
CD44-237ENST00000534082 OR5L1Q8NGL2 311 aa5.14□□□□□ -1.59
CD44-237ENST00000534082 OR5D13Q8NGL4 314 aa5.14□□□□□ -1.59
CD44-237ENST00000534082 RPS4Y2Q8TD47 263 aa5.14□□□□□ -1.59
CD44-237ENST00000534082 HDAC2Q92769 488 aaKnown RBP5.14□□□□□ -1.59
CD44-237ENST00000534082 P2RX4Q99571 388 aa5.14□□□□□ -1.59
CD44-237ENST00000534082 TM2D3Q9BRN9 247 aa5.14□□□□□ -1.59
CD44-237ENST00000534082 TMEM27Q9HBJ8 222 aa5.14□□□□□ -1.59
CD44-237ENST00000534082 ABCB10Q9NRK6 738 aa5.14□□□□□ -1.59
CD44-237ENST00000534082 C1orf123Q9NWV4 160 aa5.14□□□□□ -1.59
CD44-237ENST00000534082 STX18Q9P2W9 335 aaKnown RBP5.14□□□□□ -1.59
CD44-237ENST00000534082 ZNF229Q9UJW7 825 aa5.14□□□□□ -1.59
CD44-237ENST00000534082 ANGPT4Q9Y264 503 aa5.14□□□□□ -1.59
CD44-237ENST00000534082 hCG_1807616A0A1W2PRN6 198 aa5.13□□□□□ -1.59
CD44-237ENST00000534082 TMEM247A6NEH6 219 aa5.13□□□□□ -1.59
CD44-237ENST00000534082 A6NLC8 198 aa5.13□□□□□ -1.59
CD44-237ENST00000534082 NUDT19A8MXV4 375 aa5.13□□□□□ -1.59
CD44-237ENST00000534082 NPIPB6E9PJ23 425 aa5.13□□□□□ -1.59
CD44-237ENST00000534082 H0YAE9 185 aa5.13□□□□□ -1.59
CD44-237ENST00000534082 BLOC1S5-TXNDC5H3BN57 136 aa5.13□□□□□ -1.59
CD44-237ENST00000534082 PTBP3O95758 552 aaKnown RBP5.13□□□□□ -1.59
CD44-237ENST00000534082 HIST1H2ABP04908 130 aa5.13□□□□□ -1.59
CD44-237ENST00000534082 DBHP09172 617 aa5.13□□□□□ -1.59
CD44-237ENST00000534082 ASAH2BP0C7U1 165 aa5.13□□□□□ -1.59
CD44-237ENST00000534082 SELLP14151 372 aa5.13□□□□□ -1.59
CD44-237ENST00000534082 S100A3P33764 101 aa5.13□□□□□ -1.59
CD44-237ENST00000534082 SERPINB5P36952 375 aa5.13□□□□□ -1.59
CD44-237ENST00000534082 GUCA1AP43080 201 aaPredicted RBP5.13□□□□□ -1.59
CD44-237ENST00000534082 UGT2B15P54855 530 aa5.13□□□□□ -1.59
CD44-237ENST00000534082 RPL23AP62750 156 aaKnown RBP5.13□□□□□ -1.59
CD44-237ENST00000534082 RPL18Q07020 188 aaKnown RBP5.13□□□□□ -1.59
CD44-237ENST00000534082 SELPLGQ14242 412 aa5.13□□□□□ -1.59
CD44-237ENST00000534082 PCLAFQ15004 111 aa5.13□□□□□ -1.59
CD44-237ENST00000534082 OR8G1Q15617 311 aa5.13□□□□□ -1.59
CD44-237ENST00000534082 PCK2Q16822 640 aa5.13□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms