RNA–Protein interactions for RNA: ENST00000533242.1

NEDD8-207, Transcript of neural precursor cell expressed, developmentally down-regulated 8, humanhuman

TSL 1 (best)

Gene NEDD8, Length 2,300 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-207ENST00000533242 EVA1AQ9H8M9 152 aa7.21□□□□□ -1.26
NEDD8-207ENST00000533242 FANCFQ9NPI8 374 aa7.21□□□□□ -1.26
NEDD8-207ENST00000533242 SLCO1C1Q9NYB5 712 aa7.21□□□□□ -1.26
NEDD8-207ENST00000533242 FRRS1LQ9P0K9 344 aa7.21□□□□□ -1.26
NEDD8-207ENST00000533242 SCDO00767 359 aa7.21□□□□□ -1.26
NEDD8-207ENST00000533242 ORC5O43913 435 aa7.21□□□□□ -1.26
NEDD8-207ENST00000533242 WNT11O96014 354 aa7.21□□□□□ -1.26
NEDD8-207ENST00000533242 MT-ND4P03905 459 aa7.21□□□□□ -1.26
NEDD8-207ENST00000533242 FCGR2AP12318 317 aa7.21□□□□□ -1.26
NEDD8-207ENST00000533242 HPGDP15428 266 aa7.21□□□□□ -1.26
NEDD8-207ENST00000533242 CXCL3P19876 107 aa7.21□□□□□ -1.26
NEDD8-207ENST00000533242 SDHAP31040 664 aa7.21□□□□□ -1.26
NEDD8-207ENST00000533242 SOX2P48431 317 aa7.21□□□□□ -1.26
NEDD8-207ENST00000533242 CLDN15P56746 228 aa7.21□□□□□ -1.26
NEDD8-207ENST00000533242 PRPS1P60891 318 aa7.21□□□□□ -1.26
NEDD8-207ENST00000533242 GALK2Q01415 458 aa7.21□□□□□ -1.26
NEDD8-207ENST00000533242 ODF4Q2M2E3 257 aa7.21□□□□□ -1.26
NEDD8-207ENST00000533242 HSD17B12Q53GQ0 312 aa7.21□□□□□ -1.26
NEDD8-207ENST00000533242 LIPNQ5VXI9 398 aa7.21□□□□□ -1.26
NEDD8-207ENST00000533242 SLC43A2Q8N370 569 aa7.21□□□□□ -1.26
NEDD8-207ENST00000533242 ZNF433Q8N7K0 673 aaPredicted RBP7.21□□□□□ -1.26
NEDD8-207ENST00000533242 FADS6Q8N9I5 356 aa7.21□□□□□ -1.26
NEDD8-207ENST00000533242 BEST4Q8NFU0 473 aa7.21□□□□□ -1.26
NEDD8-207ENST00000533242 AKAP1Q92667 903 aaKnown RBP eCLIP7.21□□□□□ -1.26
NEDD8-207ENST00000533242 SYT4Q9H2B2 425 aa7.21□□□□□ -1.26
NEDD8-207ENST00000533242 GHITMQ9H3K2 345 aa7.21□□□□□ -1.26
NEDD8-207ENST00000533242 BEX1Q9HBH7 125 aa7.21□□□□□ -1.26
NEDD8-207ENST00000533242 PLSCR4Q9NRQ2 329 aa7.21□□□□□ -1.26
NEDD8-207ENST00000533242 TRAV8-7A0A075B6U6 113 aa7.2□□□□□ -1.26
NEDD8-207ENST00000533242 ZNF879B4DU55 563 aa7.2□□□□□ -1.26
NEDD8-207ENST00000533242 H0YC42 278 aa7.2□□□□□ -1.26
NEDD8-207ENST00000533242 GMDSO60547 372 aa7.2□□□□□ -1.26
NEDD8-207ENST00000533242 UBL3O95164 117 aa7.2□□□□□ -1.26
NEDD8-207ENST00000533242 PLGP00747 810 aaPredicted RBP7.2□□□□□ -1.26
NEDD8-207ENST00000533242 MMP15P51511 669 aa7.2□□□□□ -1.26
NEDD8-207ENST00000533242 SUCLG1P53597 346 aaKnown RBP7.2□□□□□ -1.26
NEDD8-207ENST00000533242 PNLIPRP2P54317 469 aa7.2□□□□□ -1.26
NEDD8-207ENST00000533242 SLC35D3Q5M8T2 416 aa7.2□□□□□ -1.26
NEDD8-207ENST00000533242 FAM214BQ7L5A3 538 aa7.2□□□□□ -1.26
NEDD8-207ENST00000533242 DPY19L4Q7Z388 723 aa7.2□□□□□ -1.26
NEDD8-207ENST00000533242 WFDC8Q8IUA0 241 aa7.2□□□□□ -1.26
NEDD8-207ENST00000533242 WDFY1Q8IWB7 410 aa7.2□□□□□ -1.26
NEDD8-207ENST00000533242 OR2M3Q8NG83 312 aa7.2□□□□□ -1.26
NEDD8-207ENST00000533242 OR6K3Q8NGY3 331 aa7.2□□□□□ -1.26
NEDD8-207ENST00000533242 ZFAND1Q8TCF1 268 aa7.2□□□□□ -1.26
NEDD8-207ENST00000533242 LIPHQ8WWY8 451 aa7.2□□□□□ -1.26
NEDD8-207ENST00000533242 SLC19A3Q9BZV2 496 aa7.2□□□□□ -1.26
NEDD8-207ENST00000533242 ADAM19Q9H013 955 aa7.2□□□□□ -1.26
NEDD8-207ENST00000533242 TAS2R5Q9NYW4 299 aa7.2□□□□□ -1.26
NEDD8-207ENST00000533242 PPP4R1LQ9P1A2 415 aa7.2□□□□□ -1.26
NEDD8-207ENST00000533242 SPATA2Q9UM82 520 aa7.2□□□□□ -1.26
NEDD8-207ENST00000533242 EMC9Q9Y3B6 208 aa7.2□□□□□ -1.26
NEDD8-207ENST00000533242 ATRQ13535 2644 aa7.2□□□□□ -1.26
NEDD8-207ENST00000533242 IFITM5A6NNB3 132 aa7.19□□□□□ -1.26
NEDD8-207ENST00000533242 C11orf98E9PRG8 122 aa7.19□□□□□ -1.26
NEDD8-207ENST00000533242 ARL6IP5O75915 188 aa7.19□□□□□ -1.26
NEDD8-207ENST00000533242 C1QBP02746 253 aa7.19□□□□□ -1.26
NEDD8-207ENST00000533242 TCRBP04435 133 aa7.19□□□□□ -1.26
NEDD8-207ENST00000533242 FAM157CP0CG43 387 aa7.19□□□□□ -1.26
NEDD8-207ENST00000533242 IL11P20809 199 aa7.19□□□□□ -1.26
NEDD8-207ENST00000533242 IL12BP29460 328 aa7.19□□□□□ -1.26
NEDD8-207ENST00000533242 LGALS3BPQ08380 585 aa7.19□□□□□ -1.26
NEDD8-207ENST00000533242 KLF9Q13886 244 aaPredicted RBP7.19□□□□□ -1.26
NEDD8-207ENST00000533242 CCDC58Q4VC31 144 aa7.19□□□□□ -1.26
NEDD8-207ENST00000533242 OR5M10Q6IEU7 315 aa7.19□□□□□ -1.26
NEDD8-207ENST00000533242 FAAP20Q6NZ36 180 aa7.19□□□□□ -1.26
NEDD8-207ENST00000533242 STAC2Q6ZMT1 411 aa7.19□□□□□ -1.26
NEDD8-207ENST00000533242 DNM1P46Q6ZS02 220 aa7.19□□□□□ -1.26
NEDD8-207ENST00000533242 FCRLAQ7L513 359 aa7.19□□□□□ -1.26
NEDD8-207ENST00000533242 JAZF1Q86VZ6 243 aa7.19□□□□□ -1.26
NEDD8-207ENST00000533242 TOMM5Q8N4H5 51 aa7.19□□□□□ -1.26
NEDD8-207ENST00000533242 ZNF563Q8TA94 476 aa7.19□□□□□ -1.26
NEDD8-207ENST00000533242 ZNF671Q8TAW3 534 aa7.19□□□□□ -1.26
NEDD8-207ENST00000533242 FNDC9Q8TBE3 224 aa7.19□□□□□ -1.26
NEDD8-207ENST00000533242 PPP1R14AQ96A00 147 aa7.19□□□□□ -1.26
NEDD8-207ENST00000533242 PTDSS2Q9BVG9 487 aa7.19□□□□□ -1.26
NEDD8-207ENST00000533242 SLCO5A1Q9H2Y9 848 aa7.19□□□□□ -1.26
NEDD8-207ENST00000533242 LIN7BQ9HAP6 207 aa7.19□□□□□ -1.26
NEDD8-207ENST00000533242 KLK11Q9UBX7 282 aa7.19□□□□□ -1.26
NEDD8-207ENST00000533242 FLVCR2Q9UPI3 526 aa7.19□□□□□ -1.26
NEDD8-207ENST00000533242 LAMP3Q9UQV4 416 aa7.19□□□□□ -1.26
NEDD8-207ENST00000533242 ZNF281Q9Y2X9 895 aa7.19□□□□□ -1.26
NEDD8-207ENST00000533242 ZANQ9Y493 2812 aa7.19□□□□□ -1.26
NEDD8-207ENST00000533242 C7orf66A4D0T2 115 aa7.19□□□□□ -1.26
NEDD8-207ENST00000533242 ANKRD34BA5PLL1 514 aa7.19□□□□□ -1.26
NEDD8-207ENST00000533242 GPR37O15354 613 aa7.19□□□□□ -1.26
NEDD8-207ENST00000533242 FABP7O15540 132 aa7.19□□□□□ -1.26
NEDD8-207ENST00000533242 GATBO75879 557 aaKnown RBP7.19□□□□□ -1.26
NEDD8-207ENST00000533242 SERPINA3P01011 423 aa7.19□□□□□ -1.26
NEDD8-207ENST00000533242 BGLAPP02818 100 aa7.19□□□□□ -1.26
NEDD8-207ENST00000533242 PNMTP11086 282 aa7.19□□□□□ -1.26
NEDD8-207ENST00000533242 SLC25A1P53007 311 aa7.19□□□□□ -1.26
NEDD8-207ENST00000533242 ZSWIM7Q19AV6 140 aa7.19□□□□□ -1.26
NEDD8-207ENST00000533242 RAET1LQ5VY80 246 aa7.19□□□□□ -1.26
NEDD8-207ENST00000533242 SLC16A9Q7RTY1 509 aa7.19□□□□□ -1.26
NEDD8-207ENST00000533242 PRSS35Q8N3Z0 413 aa7.19□□□□□ -1.26
NEDD8-207ENST00000533242 ZNF527Q8NB42 609 aa7.19□□□□□ -1.26
NEDD8-207ENST00000533242 OR11H4Q8NGC9 324 aa7.19□□□□□ -1.26
NEDD8-207ENST00000533242 OR6N2Q8NGY6 317 aa7.19□□□□□ -1.26
NEDD8-207ENST00000533242 OR52I2Q8NH67 350 aa7.19□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms