RNA–Protein interactions for RNA: ENST00000532375.5

TSPAN4-220, Transcript of tetraspanin 4, humanhuman

TSL 5

Gene TSPAN4, Length 518 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-220ENST00000532375 TRIP10Q15642 601 aa11.81□□□□□ -0.52
TSPAN4-220ENST00000532375 CARTPTQ16568 116 aa11.81□□□□□ -0.52
TSPAN4-220ENST00000532375 TMEM249Q2WGJ8 235 aa11.81□□□□□ -0.52
TSPAN4-220ENST00000532375 LCN1P1Q5VSP4 162 aa11.81□□□□□ -0.52
TSPAN4-220ENST00000532375 LRRN1Q6UXK5 716 aa11.81□□□□□ -0.52
TSPAN4-220ENST00000532375 CLEC9AQ6UXN8 241 aa11.81□□□□□ -0.52
TSPAN4-220ENST00000532375 USP51Q70EK9 711 aa11.81□□□□□ -0.52
TSPAN4-220ENST00000532375 GID4Q8IVV7 300 aa11.81□□□□□ -0.52
TSPAN4-220ENST00000532375 OR5AS1Q8N127 324 aa11.81□□□□□ -0.52
TSPAN4-220ENST00000532375 ZNF283Q8N7M2 679 aa11.81□□□□□ -0.52
TSPAN4-220ENST00000532375 DIRC2Q96SL1 478 aa11.81□□□□□ -0.52
TSPAN4-220ENST00000532375 AASSQ9UDR5 926 aa11.81□□□□□ -0.52
TSPAN4-220ENST00000532375 CD300LBA8K4G0 201 aa11.8□□□□□ -0.52
TSPAN4-220ENST00000532375 WNT9BO14905 357 aa11.8□□□□□ -0.52
TSPAN4-220ENST00000532375 SLC16A6O15403 523 aa11.8□□□□□ -0.52
TSPAN4-220ENST00000532375 SRSF10O75494 262 aaKnown RBP11.8□□□□□ -0.52
TSPAN4-220ENST00000532375 H2BFMP0C1H6 154 aa11.8□□□□□ -0.52
TSPAN4-220ENST00000532375 CDC42P60953 191 aa11.8□□□□□ -0.52
TSPAN4-220ENST00000532375 OCLNQ16625 522 aa11.8□□□□□ -0.52
TSPAN4-220ENST00000532375 DEGS2Q6QHC5 323 aa11.8□□□□□ -0.52
TSPAN4-220ENST00000532375 Q71RC1 249 aaPredicted RBP11.8□□□□□ -0.52
TSPAN4-220ENST00000532375 PGAP1Q75T13 922 aa11.8□□□□□ -0.52
TSPAN4-220ENST00000532375 ZNF540Q8NDQ6 660 aa11.8□□□□□ -0.52
TSPAN4-220ENST00000532375 OR13G1Q8NGZ3 307 aa11.8□□□□□ -0.52
TSPAN4-220ENST00000532375 FAM81AQ8TBF8 368 aa11.8□□□□□ -0.52
TSPAN4-220ENST00000532375 STMN2Q93045 179 aa11.8□□□□□ -0.52
TSPAN4-220ENST00000532375 OR8B4Q96RC9 309 aa11.8□□□□□ -0.52
TSPAN4-220ENST00000532375 CNN2Q99439 309 aaKnown RBP11.8□□□□□ -0.52
TSPAN4-220ENST00000532375 SOX7Q9BT81 388 aa11.8□□□□□ -0.52
TSPAN4-220ENST00000532375 FAM118AQ9NWS6 357 aa11.8□□□□□ -0.52
TSPAN4-220ENST00000532375 DCAF16Q9NXF7 216 aa11.8□□□□□ -0.52
TSPAN4-220ENST00000532375 DNAJC27Q9NZQ0 273 aa11.8□□□□□ -0.52
TSPAN4-220ENST00000532375 H2AFY2Q9P0M6 372 aaPredicted RBP11.8□□□□□ -0.52
TSPAN4-220ENST00000532375 WARS2Q9UGM6 360 aaKnown RBP11.8□□□□□ -0.52
TSPAN4-220ENST00000532375 LAMP5Q9UJQ1 280 aa11.8□□□□□ -0.52
TSPAN4-220ENST00000532375 LRP12Q9Y561 859 aa11.8□□□□□ -0.52
TSPAN4-220ENST00000532375 SONP18583 2426 aaKnown RBP11.79□□□□□ -0.52
TSPAN4-220ENST00000532375 IGHV1-69-2A0A0G2JMI3 117 aa11.79□□□□□ -0.52
TSPAN4-220ENST00000532375 LOC100130705A0A1B0GUX0 176 aa11.79□□□□□ -0.52
TSPAN4-220ENST00000532375 LRP5LA4QPB2 252 aa11.79□□□□□ -0.52
TSPAN4-220ENST00000532375 J3QRE1 110 aa11.79□□□□□ -0.52
TSPAN4-220ENST00000532375 PSMD9O00233 223 aa11.79□□□□□ -0.52
TSPAN4-220ENST00000532375 MAGEB4O15481 346 aaPredicted RBP11.79□□□□□ -0.52
TSPAN4-220ENST00000532375 ENTPD6O75354 484 aa11.79□□□□□ -0.52
TSPAN4-220ENST00000532375 HSD11B1P28845 292 aa11.79□□□□□ -0.52
TSPAN4-220ENST00000532375 IL2RGP31785 369 aa11.79□□□□□ -0.52
TSPAN4-220ENST00000532375 DCTDP32321 178 aa11.79□□□□□ -0.52
TSPAN4-220ENST00000532375 ELF3P78545 371 aaPredicted RBP11.79□□□□□ -0.52
TSPAN4-220ENST00000532375 TNFAIP6P98066 277 aaPredicted RBP11.79□□□□□ -0.52
TSPAN4-220ENST00000532375 FAM3AP98173 230 aa11.79□□□□□ -0.52
TSPAN4-220ENST00000532375 MALLQ13021 153 aa11.79□□□□□ -0.52
TSPAN4-220ENST00000532375 TMED1Q13445 227 aa11.79□□□□□ -0.52
TSPAN4-220ENST00000532375 RCN1Q15293 331 aa11.79□□□□□ -0.52
TSPAN4-220ENST00000532375 ZMAT1Q5H9K5 638 aa11.79□□□□□ -0.52
TSPAN4-220ENST00000532375 ZNF684Q5T5D7 378 aa11.79□□□□□ -0.52
TSPAN4-220ENST00000532375 LPCAT4Q643R3 524 aa11.79□□□□□ -0.52
TSPAN4-220ENST00000532375 FAM57BQ71RH2 274 aa11.79□□□□□ -0.52
TSPAN4-220ENST00000532375 SSX6Q7RTT6 188 aa11.79□□□□□ -0.52
TSPAN4-220ENST00000532375 SLC35F2Q8IXU6 374 aa11.79□□□□□ -0.52
TSPAN4-220ENST00000532375 ZNF679Q8IYX0 411 aa11.79□□□□□ -0.52
TSPAN4-220ENST00000532375 BHLHE23Q8NDY6 225 aa11.79□□□□□ -0.52
TSPAN4-220ENST00000532375 OR2Z1Q8NG97 314 aa11.79□□□□□ -0.52
TSPAN4-220ENST00000532375 RHOXF1Q8NHV9 184 aa11.79□□□□□ -0.52
TSPAN4-220ENST00000532375 ELMOD3Q96FG2 381 aa11.79□□□□□ -0.52
TSPAN4-220ENST00000532375 C1orf159Q96HA4 380 aa11.79□□□□□ -0.52
TSPAN4-220ENST00000532375 NIPAL2Q9H841 368 aa11.79□□□□□ -0.52
TSPAN4-220ENST00000532375 SAP30LQ9HAJ7 183 aa11.79□□□□□ -0.52
TSPAN4-220ENST00000532375 DECR2Q9NUI1 292 aa11.79□□□□□ -0.52
TSPAN4-220ENST00000532375 CLN6Q9NWW5 311 aa11.79□□□□□ -0.52
TSPAN4-220ENST00000532375 IL19Q9UHD0 177 aa11.79□□□□□ -0.52
TSPAN4-220ENST00000532375 ORC6Q9Y5N6 252 aa11.79□□□□□ -0.52
TSPAN4-220ENST00000532375 NIPBLQ6KC79 2804 aaeCLIP11.79□□□□□ -0.52
TSPAN4-220ENST00000532375 HIVEP2P31629 2446 aa11.79□□□□□ -0.52
TSPAN4-220ENST00000532375 hCG_38984A0A1B0GV85 526 aa11.78□□□□□ -0.52
TSPAN4-220ENST00000532375 CASQ2O14958 399 aaPredicted RBP11.78□□□□□ -0.52
TSPAN4-220ENST00000532375 XRCC2O43543 280 aa11.78□□□□□ -0.52
TSPAN4-220ENST00000532375 CD5LO43866 347 aa11.78□□□□□ -0.52
TSPAN4-220ENST00000532375 PNPP00491 289 aa11.78□□□□□ -0.52
TSPAN4-220ENST00000532375 IGLV3-1P01715 115 aa11.78□□□□□ -0.52
TSPAN4-220ENST00000532375 APOC1P02654 83 aa11.78□□□□□ -0.52
TSPAN4-220ENST00000532375 HLA-DPB1P04440 258 aa11.78□□□□□ -0.52
TSPAN4-220ENST00000532375 ANXA2P07355 339 aaKnown RBP11.78□□□□□ -0.52
TSPAN4-220ENST00000532375 IGHV4-31P0DP07 118 aa11.78□□□□□ -0.52
TSPAN4-220ENST00000532375 SELEP16581 610 aa11.78□□□□□ -0.52
TSPAN4-220ENST00000532375 PMELP40967 661 aa11.78□□□□□ -0.52
TSPAN4-220ENST00000532375 RIPPLY3P57055 190 aa11.78□□□□□ -0.52
TSPAN4-220ENST00000532375 PSMA6P60900 246 aaKnown RBP11.78□□□□□ -0.52
TSPAN4-220ENST00000532375 CXCR4P61073 352 aa11.78□□□□□ -0.52
TSPAN4-220ENST00000532375 MAB21L1Q13394 359 aa11.78□□□□□ -0.52
TSPAN4-220ENST00000532375 KCTD18Q6PI47 426 aaPredicted RBP11.78□□□□□ -0.52
TSPAN4-220ENST00000532375 ZNF322Q6U7Q0 402 aaPredicted RBP11.78□□□□□ -0.52
TSPAN4-220ENST00000532375 MRPL21Q7Z2W9 205 aaKnown RBP11.78□□□□□ -0.52
TSPAN4-220ENST00000532375 ENTHD1Q8IYW4 607 aa11.78□□□□□ -0.52
TSPAN4-220ENST00000532375 OR10AD1Q8NGE0 317 aa11.78□□□□□ -0.52
TSPAN4-220ENST00000532375 OR52H1Q8NGJ2 320 aa11.78□□□□□ -0.52
TSPAN4-220ENST00000532375 OR51G2Q8NGK0 314 aa11.78□□□□□ -0.52
TSPAN4-220ENST00000532375 ITLN1Q8WWA0 313 aa11.78□□□□□ -0.52
TSPAN4-220ENST00000532375 ASB17Q8WXJ9 295 aa11.78□□□□□ -0.52
TSPAN4-220ENST00000532375 PPP1R14AQ96A00 147 aa11.78□□□□□ -0.52
TSPAN4-220ENST00000532375 RNF166Q96A37 237 aaPredicted RBP11.78□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 71.9 ms