RNA–Protein interactions for RNA: ENST00000532313.5

CSRP1-215, Transcript of cysteine and glycine rich protein 1, humanhuman

TSL 1 (best)

Gene CSRP1, Length 5,239 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSRP1-215ENST00000532313 COL4A6Q14031 1691 aa10.35□□□□□ -0.75
CSRP1-215ENST00000532313 GABARAPH6UMI1 98 aa10.35□□□□□ -0.75
CSRP1-215ENST00000532313 BET1O15155 118 aa10.35□□□□□ -0.75
CSRP1-215ENST00000532313 GABARAPO95166 117 aa10.35□□□□□ -0.75
CSRP1-215ENST00000532313 ZNF239Q16600 458 aaKnown RBP10.35□□□□□ -0.75
CSRP1-215ENST00000532313 UBE2NLQ5JXB2 153 aa10.35□□□□□ -0.75
CSRP1-215ENST00000532313 CORO6Q6QEF8 472 aa10.35□□□□□ -0.75
CSRP1-215ENST00000532313 CBLN3Q6UW01 205 aa10.35□□□□□ -0.75
CSRP1-215ENST00000532313 SPNS3Q6ZMD2 512 aa10.35□□□□□ -0.75
CSRP1-215ENST00000532313 CALHM3Q86XJ0 350 aa10.35□□□□□ -0.75
CSRP1-215ENST00000532313 MGAT4CQ9UBM8 478 aa10.35□□□□□ -0.75
CSRP1-215ENST00000532313 TMEM30CPA0ZSE6 113 aa10.35□□□□□ -0.75
CSRP1-215ENST00000532313 CEBPZOSA8MTT3 80 aa10.35□□□□□ -0.75
CSRP1-215ENST00000532313 NDUFA2O43678 99 aa10.35□□□□□ -0.75
CSRP1-215ENST00000532313 CPEP16870 476 aa10.35□□□□□ -0.75
CSRP1-215ENST00000532313 APEX1P27695 318 aaKnown RBP10.35□□□□□ -0.75
CSRP1-215ENST00000532313 MADCAM1Q13477 382 aa10.35□□□□□ -0.75
CSRP1-215ENST00000532313 OR2AK2Q8NG84 335 aa10.35□□□□□ -0.75
CSRP1-215ENST00000532313 NIPSNAP1Q9BPW8 284 aa10.35□□□□□ -0.75
CSRP1-215ENST00000532313 NECAP2Q9NVZ3 263 aa10.35□□□□□ -0.75
CSRP1-215ENST00000532313 TANC1Q9C0D5 1861 aa10.35□□□□□ -0.75
CSRP1-215ENST00000532313 ARPC4-TTLL3A0A0A6YYG9 625 aa10.35□□□□□ -0.75
CSRP1-215ENST00000532313 LOC100289279A0A1B0GTE1 492 aa10.35□□□□□ -0.75
CSRP1-215ENST00000532313 ATF1P18846 271 aa10.35□□□□□ -0.75
CSRP1-215ENST00000532313 SSTR2P30874 369 aa10.35□□□□□ -0.75
CSRP1-215ENST00000532313 SOX18P35713 384 aa10.35□□□□□ -0.75
CSRP1-215ENST00000532313 EIF2B2P49770 351 aaKnown RBP10.35□□□□□ -0.75
CSRP1-215ENST00000532313 SPATA46Q5T0L3 261 aa10.35□□□□□ -0.75
CSRP1-215ENST00000532313 ANGPTL5Q86XS5 388 aa10.35□□□□□ -0.75
CSRP1-215ENST00000532313 ADGRG3Q86Y34 549 aa10.35□□□□□ -0.75
CSRP1-215ENST00000532313 Q8N402 240 aa10.35□□□□□ -0.75
CSRP1-215ENST00000532313 OTOSQ8NHW6 89 aa10.35□□□□□ -0.75
CSRP1-215ENST00000532313 FAM131CQ96AQ9 280 aa10.35□□□□□ -0.75
CSRP1-215ENST00000532313 C10orf35Q96D05 121 aa10.35□□□□□ -0.75
CSRP1-215ENST00000532313 SIGLEC11Q96RL6 698 aa10.35□□□□□ -0.75
CSRP1-215ENST00000532313 DOK1Q99704 481 aa10.35□□□□□ -0.75
CSRP1-215ENST00000532313 PRO3102Q9H379 93 aa10.35□□□□□ -0.75
CSRP1-215ENST00000532313 PLEKHF2Q9H8W4 249 aa10.35□□□□□ -0.75
CSRP1-215ENST00000532313 EHFQ9NZC4 300 aa10.35□□□□□ -0.75
CSRP1-215ENST00000532313 TPRP12270 2363 aaKnown RBP10.35□□□□□ -0.75
CSRP1-215ENST00000532313 A0A0G2JMP0 313 aa10.34□□□□□ -0.75
CSRP1-215ENST00000532313 TMEM210A6NLX4 147 aa10.34□□□□□ -0.75
CSRP1-215ENST00000532313 ADAM20O43506 726 aa10.34□□□□□ -0.75
CSRP1-215ENST00000532313 CDC14BO60729 498 aa10.34□□□□□ -0.75
CSRP1-215ENST00000532313 T-ENOLP0DO92 83 aa10.34□□□□□ -0.75
CSRP1-215ENST00000532313 MRPS34P82930 218 aaKnown RBP10.34□□□□□ -0.75
CSRP1-215ENST00000532313 LY6DQ14210 128 aa10.34□□□□□ -0.75
CSRP1-215ENST00000532313 FOXRED2Q8IWF2 684 aa10.34□□□□□ -0.75
CSRP1-215ENST00000532313 GALNT11Q8NCW6 608 aa10.34□□□□□ -0.75
CSRP1-215ENST00000532313 OR4M2Q8NGB6 313 aa10.34□□□□□ -0.75
CSRP1-215ENST00000532313 OR5D18Q8NGL1 313 aa10.34□□□□□ -0.75
CSRP1-215ENST00000532313 ABHD3Q8WU67 409 aa10.34□□□□□ -0.75
CSRP1-215ENST00000532313 ASB10Q8WXI3 467 aa10.34□□□□□ -0.75
CSRP1-215ENST00000532313 SHARPINQ9H0F6 387 aa10.34□□□□□ -0.75
CSRP1-215ENST00000532313 C1RLQ9NZP8 487 aa10.34□□□□□ -0.75
CSRP1-215ENST00000532313 EP300Q09472 2414 aaPredicted RBP10.34□□□□□ -0.75
CSRP1-215ENST00000532313 K7ENP7 123 aa10.34□□□□□ -0.75
CSRP1-215ENST00000532313 TIAF1O95411 115 aa10.34□□□□□ -0.75
CSRP1-215ENST00000532313 MDH2P40926 338 aaKnown RBP10.34□□□□□ -0.75
CSRP1-215ENST00000532313 VEGFCP49767 419 aa10.34□□□□□ -0.75
CSRP1-215ENST00000532313 CD226Q15762 336 aa10.34□□□□□ -0.75
CSRP1-215ENST00000532313 TSEN54Q7Z6J9 526 aaKnown RBP10.34□□□□□ -0.75
CSRP1-215ENST00000532313 GDPD1Q8N9F7 314 aa10.34□□□□□ -0.75
CSRP1-215ENST00000532313 RHOXF1Q8NHV9 184 aa10.34□□□□□ -0.75
CSRP1-215ENST00000532313 ZNF251Q9BRH9 671 aa10.34□□□□□ -0.75
CSRP1-215ENST00000532313 SLCO1B1Q9Y6L6 691 aa10.34□□□□□ -0.75
CSRP1-215ENST00000532313 EPPINO95925 133 aa10.34□□□□□ -0.75
CSRP1-215ENST00000532313 OR2T2Q6IF00 324 aa10.34□□□□□ -0.75
CSRP1-215ENST00000532313 STX12Q86Y82 276 aa10.34□□□□□ -0.75
CSRP1-215ENST00000532313 BPIFB2Q8N4F0 458 aa10.34□□□□□ -0.75
CSRP1-215ENST00000532313 FAM222BQ8WU58 562 aa10.34□□□□□ -0.75
CSRP1-215ENST00000532313 RPEQ96AT9 228 aa10.34□□□□□ -0.75
CSRP1-215ENST00000532313 ASF1BQ9NVP2 202 aa10.34□□□□□ -0.75
CSRP1-215ENST00000532313 OR6C3Q9NZP0 311 aa10.34□□□□□ -0.75
CSRP1-215ENST00000532313 SIGLEC7Q9Y286 467 aa10.34□□□□□ -0.75
CSRP1-215ENST00000532313 GPR12P47775 334 aa10.34□□□□□ -0.75
CSRP1-215ENST00000532313 RAB11AP62491 216 aa10.34□□□□□ -0.75
CSRP1-215ENST00000532313 ZP4Q12836 540 aa10.34□□□□□ -0.75
CSRP1-215ENST00000532313 DOC2BQ14184 412 aa10.34□□□□□ -0.75
CSRP1-215ENST00000532313 TATDN3Q17R31 274 aa10.34□□□□□ -0.75
CSRP1-215ENST00000532313 NADK2Q4G0N4 442 aa10.34□□□□□ -0.75
CSRP1-215ENST00000532313 LILRB2Q8N423 598 aa10.34□□□□□ -0.75
CSRP1-215ENST00000532313 ZNF519Q8TB69 540 aa10.34□□□□□ -0.75
CSRP1-215ENST00000532313 MS4A7Q9GZW8 240 aaPredicted RBP10.34□□□□□ -0.75
CSRP1-215ENST00000532313 NKX1-2Q9UD57 310 aaPredicted RBP10.34□□□□□ -0.75
CSRP1-215ENST00000532313 ZNF629Q9UEG4 869 aaPredicted RBP10.34□□□□□ -0.75
CSRP1-215ENST00000532313 LAMP3Q9UQV4 416 aa10.34□□□□□ -0.75
CSRP1-215ENST00000532313 AHCTF1Q8WYP5 2266 aa10.34□□□□□ -0.75
CSRP1-215ENST00000532313 B9A039 149 aa10.33□□□□□ -0.76
CSRP1-215ENST00000532313 PROB1E7EW31 1015 aa10.33□□□□□ -0.76
CSRP1-215ENST00000532313 GABRPO00591 440 aa10.33□□□□□ -0.76
CSRP1-215ENST00000532313 DXOO77932 396 aaKnown RBP10.33□□□□□ -0.76
CSRP1-215ENST00000532313 HPNP05981 417 aa10.33□□□□□ -0.76
CSRP1-215ENST00000532313 CELA2AP08217 269 aa10.33□□□□□ -0.76
CSRP1-215ENST00000532313 AKR1C4P17516 323 aa10.33□□□□□ -0.76
CSRP1-215ENST00000532313 LRRC28Q86X40 367 aaPredicted RBP10.33□□□□□ -0.76
CSRP1-215ENST00000532313 IMMP1LQ96LU5 166 aa10.33□□□□□ -0.76
CSRP1-215ENST00000532313 JMJD8Q96S16 334 aa10.33□□□□□ -0.76
CSRP1-215ENST00000532313 GABARAPL3Q9BY60 117 aa10.33□□□□□ -0.76
CSRP1-215ENST00000532313 TMEM38BQ9NVV0 291 aa10.33□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms