RNA–Protein interactions for RNA: ENST00000529637.5

USP48-213, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 1 (best) BASIC

Gene USP48, Length 3,228 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-213ENST00000529637 PLA2G2EQ9NZK7 142 aa12.69□□□□□ -0.38
USP48-213ENST00000529637 A0A1W2PPC4 97 aa12.68□□□□□ -0.38
USP48-213ENST00000529637 A0A1W2PPH5 198 aa12.68□□□□□ -0.38
USP48-213ENST00000529637 LRP3O75074 770 aa12.68□□□□□ -0.38
USP48-213ENST00000529637 ZNF14P17017 642 aaPredicted RBP12.68□□□□□ -0.38
USP48-213ENST00000529637 SSBP1Q04837 148 aaKnown RBP12.68□□□□□ -0.38
USP48-213ENST00000529637 TSC22D1Q15714 1073 aa12.68□□□□□ -0.38
USP48-213ENST00000529637 ZNF584Q8IVC4 421 aa12.68□□□□□ -0.38
USP48-213ENST00000529637 SECTM1Q8WVN6 248 aa12.68□□□□□ -0.38
USP48-213ENST00000529637 TWSG1Q9GZX9 223 aa12.68□□□□□ -0.38
USP48-213ENST00000529637 ELOVL3Q9HB03 270 aa12.68□□□□□ -0.38
USP48-213ENST00000529637 SOX1O00570 391 aaPredicted RBP12.68□□□□□ -0.38
USP48-213ENST00000529637 STK17BO94768 372 aa12.68□□□□□ -0.38
USP48-213ENST00000529637 KLK3P07288 261 aaPredicted RBP12.68□□□□□ -0.38
USP48-213ENST00000529637 SPOCK1Q08629 439 aa12.68□□□□□ -0.38
USP48-213ENST00000529637 KIF26BQ2KJY2 2108 aa12.68□□□□□ -0.38
USP48-213ENST00000529637 RNASE10Q5GAN6 216 aaKnown RBP12.68□□□□□ -0.38
USP48-213ENST00000529637 TMEM225Q6GV28 225 aa12.68□□□□□ -0.38
USP48-213ENST00000529637 ARHGEF39Q8N4T4 335 aa12.68□□□□□ -0.38
USP48-213ENST00000529637 C15orf54Q8N8G6 183 aa12.68□□□□□ -0.38
USP48-213ENST00000529637 TSTD1Q8NFU3 115 aa12.68□□□□□ -0.38
USP48-213ENST00000529637 ADAMTS18Q8TE60 1221 aa12.68□□□□□ -0.38
USP48-213ENST00000529637 PTPMT1Q8WUK0 201 aaPredicted RBP12.68□□□□□ -0.38
USP48-213ENST00000529637 ARL5BQ96KC2 179 aa12.68□□□□□ -0.38
USP48-213ENST00000529637 SLC2A4RGQ9NR83 387 aa12.68□□□□□ -0.38
USP48-213ENST00000529637 CACFD1Q9UGQ2 172 aa12.68□□□□□ -0.38
USP48-213ENST00000529637 ASCC3Q8N3C0 2202 aaKnown RBP12.68□□□□□ -0.38
USP48-213ENST00000529637 RHPN2P1A8MT19 583 aa12.67□□□□□ -0.38
USP48-213ENST00000529637 FAM157AC9JC47 383 aa12.67□□□□□ -0.38
USP48-213ENST00000529637 SNRNP70P08621 437 aaKnown RBP12.67□□□□□ -0.38
USP48-213ENST00000529637 IFI6P09912 130 aa12.67□□□□□ -0.38
USP48-213ENST00000529637 PRF1P14222 555 aa12.67□□□□□ -0.38
USP48-213ENST00000529637 ACKR3P25106 362 aa12.67□□□□□ -0.38
USP48-213ENST00000529637 HRH1P35367 487 aa12.67□□□□□ -0.38
USP48-213ENST00000529637 NSDHLQ15738 373 aa12.67□□□□□ -0.38
USP48-213ENST00000529637 SGCAQ16586 387 aa12.67□□□□□ -0.38
USP48-213ENST00000529637 MEP1BQ16820 701 aa12.67□□□□□ -0.38
USP48-213ENST00000529637 OR2B11Q5JQS5 317 aa12.67□□□□□ -0.38
USP48-213ENST00000529637 FJX1Q86VR8 437 aa12.67□□□□□ -0.38
USP48-213ENST00000529637 OR51F2Q8NH61 342 aa12.67□□□□□ -0.38
USP48-213ENST00000529637 SULT4A1Q9BR01 284 aa12.67□□□□□ -0.38
USP48-213ENST00000529637 RTN4RQ9BZR6 473 aa12.67□□□□□ -0.38
USP48-213ENST00000529637 PCDH15Q96QU1 1955 aa12.67□□□□□ -0.38
USP48-213ENST00000529637 C2CD4DB7Z1M9 353 aa12.67□□□□□ -0.38
USP48-213ENST00000529637 MED6O75586 246 aa12.67□□□□□ -0.38
USP48-213ENST00000529637 IGHV2-5P01817 119 aa12.67□□□□□ -0.38
USP48-213ENST00000529637 FCGR3AP08637 254 aa12.67□□□□□ -0.38
USP48-213ENST00000529637 CCR5P51681 352 aa12.67□□□□□ -0.38
USP48-213ENST00000529637 SLC37A1P57057 533 aa12.67□□□□□ -0.38
USP48-213ENST00000529637 IGLV3-21P80748 117 aaPredicted RBP12.67□□□□□ -0.38
USP48-213ENST00000529637 MFGE8Q08431 387 aaPredicted RBP12.67□□□□□ -0.38
USP48-213ENST00000529637 CCINQ13939 588 aa12.67□□□□□ -0.38
USP48-213ENST00000529637 RAB30Q15771 203 aa12.67□□□□□ -0.38
USP48-213ENST00000529637 ADAM5Q6NVV9 412 aa12.67□□□□□ -0.38
USP48-213ENST00000529637 ZC3HAV1Q7Z2W4 902 aaKnown RBP12.67□□□□□ -0.38
USP48-213ENST00000529637 KDM8Q8N371 416 aa12.67□□□□□ -0.38
USP48-213ENST00000529637 CUTCQ9NTM9 273 aa12.67□□□□□ -0.38
USP48-213ENST00000529637 METTL1Q9UBP6 276 aaKnown RBP12.67□□□□□ -0.38
USP48-213ENST00000529637 MBTPS2O43462 519 aa12.67□□□□□ -0.38
USP48-213ENST00000529637 LMX1BO60663 402 aa12.67□□□□□ -0.38
USP48-213ENST00000529637 CD5P06127 495 aa12.67□□□□□ -0.38
USP48-213ENST00000529637 FOXL2P58012 376 aa12.67□□□□□ -0.38
USP48-213ENST00000529637 ZNF117Q03924 483 aa12.67□□□□□ -0.38
USP48-213ENST00000529637 PLCXD2Q0VAA5 305 aa12.67□□□□□ -0.38
USP48-213ENST00000529637 CHRDL2Q6WN34 429 aa12.67□□□□□ -0.38
USP48-213ENST00000529637 GKN2Q86XP6 184 aa12.67□□□□□ -0.38
USP48-213ENST00000529637 ZNF561Q8N587 486 aa12.67□□□□□ -0.38
USP48-213ENST00000529637 JAGN1Q8N5M9 183 aa12.67□□□□□ -0.38
USP48-213ENST00000529637 MARCH1Q8TCQ1 289 aa12.67□□□□□ -0.38
USP48-213ENST00000529637 B9D1Q9UPM9 204 aa12.67□□□□□ -0.38
USP48-213ENST00000529637 FREM3P0C091 2139 aa12.66□□□□□ -0.38
USP48-213ENST00000529637 SLC16A7O60669 478 aa12.66□□□□□ -0.38
USP48-213ENST00000529637 FBXO24O75426 580 aa12.66□□□□□ -0.38
USP48-213ENST00000529637 IL33O95760 270 aa12.66□□□□□ -0.38
USP48-213ENST00000529637 ARG1P05089 322 aa12.66□□□□□ -0.38
USP48-213ENST00000529637 FBP1P09467 338 aa12.66□□□□□ -0.38
USP48-213ENST00000529637 FOSL1P15407 271 aa12.66□□□□□ -0.38
USP48-213ENST00000529637 PI3P19957 117 aa12.66□□□□□ -0.38
USP48-213ENST00000529637 SLC25A1P53007 311 aa12.66□□□□□ -0.38
USP48-213ENST00000529637 NAAAQ02083 359 aa12.66□□□□□ -0.38
USP48-213ENST00000529637 FAM76BQ5HYJ3 339 aa12.66□□□□□ -0.38
USP48-213ENST00000529637 RPL7L1Q6DKI1 246 aaKnown RBP12.66□□□□□ -0.38
USP48-213ENST00000529637 TRAPPC6BQ86SZ2 158 aa12.66□□□□□ -0.38
USP48-213ENST00000529637 ADAMTS17Q8TE56 1095 aa12.66□□□□□ -0.38
USP48-213ENST00000529637 FAM46BQ96A09 425 aa12.66□□□□□ -0.38
USP48-213ENST00000529637 SMIM8Q96KF7 97 aa12.66□□□□□ -0.38
USP48-213ENST00000529637 SLC46A1Q96NT5 459 aa12.66□□□□□ -0.38
USP48-213ENST00000529637 CHRDQ9H2X0 955 aa12.66□□□□□ -0.38
USP48-213ENST00000529637 GATCO43716 136 aaKnown RBP12.66□□□□□ -0.38
USP48-213ENST00000529637 OR8U9P0C7N5 309 aa12.66□□□□□ -0.38
USP48-213ENST00000529637 GP1BBP13224 206 aa12.66□□□□□ -0.38
USP48-213ENST00000529637 DRAM2Q6UX65 266 aa12.66□□□□□ -0.38
USP48-213ENST00000529637 LILRB2Q8N423 598 aa12.66□□□□□ -0.38
USP48-213ENST00000529637 OR8U1Q8NH10 309 aa12.66□□□□□ -0.38
USP48-213ENST00000529637 RNF128Q8TEB7 428 aa12.66□□□□□ -0.38
USP48-213ENST00000529637 THAP3Q8WTV1 239 aaPredicted RBP12.66□□□□□ -0.38
USP48-213ENST00000529637 GPX7Q96SL4 187 aaPredicted RBP12.66□□□□□ -0.38
USP48-213ENST00000529637 TRBV6-7A0A0A0MS04 114 aa12.66□□□□□ -0.38
USP48-213ENST00000529637 DBX1A6NMT0 343 aa12.66□□□□□ -0.38
USP48-213ENST00000529637 ZNF432O94892 652 aa12.66□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms