RNA–Protein interactions for RNA: ENST00000528672.1

CD44-229, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 4

Gene CD44, Length 586 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-229ENST00000528672 SSTR5P35346 364 aa2.63□□□□□ -1.99
CD44-229ENST00000528672 PMELP40967 661 aa2.63□□□□□ -1.99
CD44-229ENST00000528672 CRYBB2P43320 205 aa2.63□□□□□ -1.99
CD44-229ENST00000528672 MAP2K4P45985 399 aa2.63□□□□□ -1.99
CD44-229ENST00000528672 OR1D4P47884 311 aa2.63□□□□□ -1.99
CD44-229ENST00000528672 SERPINB10P48595 397 aa2.63□□□□□ -1.99
CD44-229ENST00000528672 CSNK1A1P48729 337 aa2.63□□□□□ -1.99
CD44-229ENST00000528672 GSK3BP49841 420 aa2.63□□□□□ -1.99
CD44-229ENST00000528672 RBP2P50120 134 aa2.63□□□□□ -1.99
CD44-229ENST00000528672 CSRP3P50461 194 aa2.63□□□□□ -1.99
CD44-229ENST00000528672 DNAJB13P59910 316 aa2.63□□□□□ -1.99
CD44-229ENST00000528672 SNAP25P60880 206 aa2.63□□□□□ -1.99
CD44-229ENST00000528672 CDC42P60953 191 aa2.63□□□□□ -1.99
CD44-229ENST00000528672 GTF2BQ00403 316 aa2.63□□□□□ -1.99
CD44-229ENST00000528672 SRSF6Q13247 344 aaKnown RBP2.63□□□□□ -1.99
CD44-229ENST00000528672 CRMP1Q14194 572 aa2.63□□□□□ -1.99
CD44-229ENST00000528672 LY6DQ14210 128 aa2.63□□□□□ -1.99
CD44-229ENST00000528672 GK3PQ14409 553 aa2.63□□□□□ -1.99
CD44-229ENST00000528672 KCNJ11Q14654 390 aa2.63□□□□□ -1.99
CD44-229ENST00000528672 MICAQ29983 383 aa2.63□□□□□ -1.99
CD44-229ENST00000528672 C17orf58Q2M2W7 97 aa2.63□□□□□ -1.99
CD44-229ENST00000528672 PGGHGQ32M88 737 aa2.63□□□□□ -1.99
CD44-229ENST00000528672 SPIN3Q5JUX0 258 aa2.63□□□□□ -1.99
CD44-229ENST00000528672 C1orf220Q5T0J3 134 aa2.63□□□□□ -1.99
CD44-229ENST00000528672 OTUD3Q5T2D3 398 aaPredicted RBP2.63□□□□□ -1.99
CD44-229ENST00000528672 C9orf64Q5T6V5 341 aa2.63□□□□□ -1.99
CD44-229ENST00000528672 SYT6Q5T7P8 510 aaPredicted RBP2.63□□□□□ -1.99
CD44-229ENST00000528672 C9orf66Q5T8R8 295 aa2.63□□□□□ -1.99
CD44-229ENST00000528672 C9orf135Q5VTT2 229 aa2.63□□□□□ -1.99
CD44-229ENST00000528672 SAXO2Q658L1 398 aa2.63□□□□□ -1.99
CD44-229ENST00000528672 DHRS4L2Q6PKH6 230 aa2.63□□□□□ -1.99
CD44-229ENST00000528672 PAQR6Q6TCH4 344 aa2.63□□□□□ -1.99
CD44-229ENST00000528672 ACOT7LQ6ZUV0 252 aa2.63□□□□□ -1.99
CD44-229ENST00000528672 TMUB2Q71RG4 321 aa2.63□□□□□ -1.99
CD44-229ENST00000528672 TMED4Q7Z7H5 227 aa2.63□□□□□ -1.99
CD44-229ENST00000528672 RAB43Q86YS6 212 aa2.63□□□□□ -1.99
CD44-229ENST00000528672 TRAPPC5Q8IUR0 188 aa2.63□□□□□ -1.99
CD44-229ENST00000528672 WDFY1Q8IWB7 410 aa2.63□□□□□ -1.99
CD44-229ENST00000528672 RIMKLAQ8IXN7 391 aa2.63□□□□□ -1.99
CD44-229ENST00000528672 FGFRL1Q8N441 504 aa2.63□□□□□ -1.99
CD44-229ENST00000528672 ARRDC1Q8N5I2 433 aa2.63□□□□□ -1.99
CD44-229ENST00000528672 TMEM251Q8N6I4 163 aa2.63□□□□□ -1.99
CD44-229ENST00000528672 C4orf32Q8N8J7 132 aa2.63□□□□□ -1.99
CD44-229ENST00000528672 SDR9C7Q8NEX9 313 aa2.63□□□□□ -1.99
CD44-229ENST00000528672 OR1L6Q8NGR2 347 aa2.63□□□□□ -1.99
CD44-229ENST00000528672 OR5H6Q8NGV6 325 aa2.63□□□□□ -1.99
CD44-229ENST00000528672 OR4K15Q8NH41 348 aa2.63□□□□□ -1.99
CD44-229ENST00000528672 OR52E5Q8NH55 327 aa2.63□□□□□ -1.99
CD44-229ENST00000528672 OR51A7Q8NH64 312 aa2.63□□□□□ -1.99
CD44-229ENST00000528672 FAM110BQ8TC76 370 aa2.63□□□□□ -1.99
CD44-229ENST00000528672 LGALS14Q8TCE9 139 aa2.63□□□□□ -1.99
CD44-229ENST00000528672 PHF10Q8WUB8 498 aaKnown RBP2.63□□□□□ -1.99
CD44-229ENST00000528672 NAT14Q8WUY8 206 aa2.63□□□□□ -1.99
CD44-229ENST00000528672 TFB1MQ8WVM0 346 aaKnown RBP2.63□□□□□ -1.99
CD44-229ENST00000528672 TCTEX1D2Q8WW35 142 aa2.63□□□□□ -1.99
CD44-229ENST00000528672 C11orf40Q8WZ69 217 aa2.63□□□□□ -1.99
CD44-229ENST00000528672 MRPS31Q92665 395 aaKnown RBP2.63□□□□□ -1.99
CD44-229ENST00000528672 FAF2Q96CS3 445 aa2.63□□□□□ -1.99
CD44-229ENST00000528672 CXorf40BQ96DE9 158 aa2.63□□□□□ -1.99
CD44-229ENST00000528672 YIPF6Q96EC8 236 aa2.63□□□□□ -1.99
CD44-229ENST00000528672 SMIM12Q96EX1 92 aa2.63□□□□□ -1.99
CD44-229ENST00000528672 WDR34Q96EX3 536 aa2.63□□□□□ -1.99
CD44-229ENST00000528672 KCNA7Q96RP8 456 aa2.63□□□□□ -1.99
CD44-229ENST00000528672 HBEGFQ99075 208 aa2.63□□□□□ -1.99
CD44-229ENST00000528672 FMO2Q99518 471 aa2.63□□□□□ -1.99
CD44-229ENST00000528672 RBBP8Q99708 897 aa2.63□□□□□ -1.99
CD44-229ENST00000528672 TIMM29Q9BSF4 260 aa2.63□□□□□ -1.99
CD44-229ENST00000528672 DPH7Q9BTV6 452 aa2.63□□□□□ -1.99
CD44-229ENST00000528672 BARHL1Q9BZE3 327 aa2.63□□□□□ -1.99
CD44-229ENST00000528672 PPA2Q9H2U2 334 aa2.63□□□□□ -1.99
CD44-229ENST00000528672 BOLA2Q9H3K6 86 aa2.63□□□□□ -1.99
CD44-229ENST00000528672 TUBB1Q9H4B7 451 aa2.63□□□□□ -1.99
CD44-229ENST00000528672 NHEJ1Q9H9Q4 299 aaPredicted RBP2.63□□□□□ -1.99
CD44-229ENST00000528672 NMNAT1Q9HAN9 279 aaPredicted RBP2.63□□□□□ -1.99
CD44-229ENST00000528672 RHOFQ9HBH0 211 aa2.63□□□□□ -1.99
CD44-229ENST00000528672 TMBIM4Q9HC24 238 aa2.63□□□□□ -1.99
CD44-229ENST00000528672 EML4Q9HC35 981 aaKnown RBP2.63□□□□□ -1.99
CD44-229ENST00000528672 ANKHQ9HCJ1 492 aa2.63□□□□□ -1.99
CD44-229ENST00000528672 TMEM138Q9NPI0 162 aa2.63□□□□□ -1.99
CD44-229ENST00000528672 NIT2Q9NQR4 276 aa2.63□□□□□ -1.99
CD44-229ENST00000528672 BIN3Q9NQY0 253 aa2.63□□□□□ -1.99
CD44-229ENST00000528672 PAK1IP1Q9NWT1 392 aaPredicted RBP2.63□□□□□ -1.99
CD44-229ENST00000528672 C1orf109Q9NX04 203 aa2.63□□□□□ -1.99
CD44-229ENST00000528672 MAT2BQ9NZL9 334 aa2.63□□□□□ -1.99
CD44-229ENST00000528672 GLS2Q9UI32 602 aa2.63□□□□□ -1.99
CD44-229ENST00000528672 RAB26Q9ULW5 256 aa2.63□□□□□ -1.99
CD44-229ENST00000528672 SAMD4AQ9UPU9 718 aaKnown RBP2.63□□□□□ -1.99
CD44-229ENST00000528672 SLC7A11Q9UPY5 501 aa2.63□□□□□ -1.99
CD44-229ENST00000528672 LTBP4Q8N2S1 1624 aa2.63□□□□□ -1.99
CD44-229ENST00000528672 JCADQ9P266 1359 aa2.62□□□□□ -1.99
CD44-229ENST00000528672 BAZ1AQ9NRL2 1556 aaPredicted RBP2.62□□□□□ -1.99
CD44-229ENST00000528672 NCOA1Q15788 1441 aa2.62□□□□□ -1.99
CD44-229ENST00000528672 RRBP1Q9P2E9 1410 aaKnown RBP2.62□□□□□ -1.99
CD44-229ENST00000528672 IGHV3-16A0A0C4DH30 117 aa2.62□□□□□ -1.99
CD44-229ENST00000528672 KBTBD11-OT1A0A1B0GTJ5 212 aa2.62□□□□□ -1.99
CD44-229ENST00000528672 A0A1B0GVI7 797 aa2.62□□□□□ -1.99
CD44-229ENST00000528672 CCDC182A6NF36 153 aa2.62□□□□□ -1.99
CD44-229ENST00000528672 OR11H12B2RN74 326 aa2.62□□□□□ -1.99
CD44-229ENST00000528672 TRDCB7Z8K6 153 aa2.62□□□□□ -1.99
CD44-229ENST00000528672 E9PLD3 99 aa2.62□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms