RNA–Protein interactions for RNA: ENST00000526054.5

VPS28-204, Transcript of VPS28, ESCRT-I subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS28, Length 892 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS28-204ENST00000526054 RNF133Q8WVZ7 376 aa8.66□□□□□ -1.02
VPS28-204ENST00000526054 CYGBQ8WWM9 190 aa8.66□□□□□ -1.02
VPS28-204ENST00000526054 ZNF799Q96GE5 643 aa8.66□□□□□ -1.02
VPS28-204ENST00000526054 ZNF582Q96NG8 517 aaPredicted RBP8.66□□□□□ -1.02
VPS28-204ENST00000526054 KCNJ15Q99712 375 aa8.66□□□□□ -1.02
VPS28-204ENST00000526054 SYT3Q9BQG1 590 aa8.66□□□□□ -1.02
VPS28-204ENST00000526054 SOX7Q9BT81 388 aa8.66□□□□□ -1.02
VPS28-204ENST00000526054 ABHD6Q9BV23 337 aa8.66□□□□□ -1.02
VPS28-204ENST00000526054 OR2J1Q9GZK6 312 aa8.66□□□□□ -1.02
VPS28-204ENST00000526054 ADGRL4Q9HBW9 690 aa8.66□□□□□ -1.02
VPS28-204ENST00000526054 SLCO1C1Q9NYB5 712 aa8.66□□□□□ -1.02
VPS28-204ENST00000526054 DUSP13Q9UII6 198 aa8.66□□□□□ -1.02
VPS28-204ENST00000526054 FZR1Q9UM11 496 aa8.66□□□□□ -1.02
VPS28-204ENST00000526054 IGLV3-9A0A075B6K5 115 aa8.65□□□□□ -1.02
VPS28-204ENST00000526054 ZNF670-ZNF695F2Z2N8 137 aa8.65□□□□□ -1.02
VPS28-204ENST00000526054 DLGAP1O14490 977 aa8.65□□□□□ -1.02
VPS28-204ENST00000526054 ENTPD6O75354 484 aa8.65□□□□□ -1.02
VPS28-204ENST00000526054 MT-ND5P03915 603 aa8.65□□□□□ -1.02
VPS28-204ENST00000526054 LCATP04180 440 aa8.65□□□□□ -1.02
VPS28-204ENST00000526054 H2BFMP0C1H6 154 aa8.65□□□□□ -1.02
VPS28-204ENST00000526054 SBK2P0C263 348 aa8.65□□□□□ -1.02
VPS28-204ENST00000526054 ALOX5APP20292 161 aa8.65□□□□□ -1.02
VPS28-204ENST00000526054 IL2RGP31785 369 aa8.65□□□□□ -1.02
VPS28-204ENST00000526054 OTX1P32242 354 aaPredicted RBP8.65□□□□□ -1.02
VPS28-204ENST00000526054 ATP6V1E1P36543 226 aa8.65□□□□□ -1.02
VPS28-204ENST00000526054 PRKXP51817 358 aa8.65□□□□□ -1.02
VPS28-204ENST00000526054 OCLNQ16625 522 aa8.65□□□□□ -1.02
VPS28-204ENST00000526054 NKPD1Q17RQ9 610 aa8.65□□□□□ -1.02
VPS28-204ENST00000526054 MSMPQ1L6U9 139 aa8.65□□□□□ -1.02
VPS28-204ENST00000526054 SLC25A30Q5SVS4 291 aa8.65□□□□□ -1.02
VPS28-204ENST00000526054 SPATA46Q5T0L3 261 aa8.65□□□□□ -1.02
VPS28-204ENST00000526054 LIPNQ5VXI9 398 aa8.65□□□□□ -1.02
VPS28-204ENST00000526054 MBNL2Q5VZF2 373 aaKnown RBP8.65□□□□□ -1.02
VPS28-204ENST00000526054 KCTD18Q6PI47 426 aaPredicted RBP8.65□□□□□ -1.02
VPS28-204ENST00000526054 KRT77Q7Z794 578 aa8.65□□□□□ -1.02
VPS28-204ENST00000526054 HIST2H2ABQ8IUE6 130 aaPredicted RBP8.65□□□□□ -1.02
VPS28-204ENST00000526054 SLC35F2Q8IXU6 374 aa8.65□□□□□ -1.02
VPS28-204ENST00000526054 ZCCHC24Q8N2G6 241 aaKnown RBP8.65□□□□□ -1.02
VPS28-204ENST00000526054 ZNF283Q8N7M2 679 aa8.65□□□□□ -1.02
VPS28-204ENST00000526054 KLF14Q8TD94 323 aaPredicted RBP8.65□□□□□ -1.02
VPS28-204ENST00000526054 ASB17Q8WXJ9 295 aa8.65□□□□□ -1.02
VPS28-204ENST00000526054 HPS1Q92902 700 aa8.65□□□□□ -1.02
VPS28-204ENST00000526054 MARS2Q96GW9 593 aaKnown RBP8.65□□□□□ -1.02
VPS28-204ENST00000526054 Q96MT0 163 aa8.65□□□□□ -1.02
VPS28-204ENST00000526054 DOK1Q99704 481 aa8.65□□□□□ -1.02
VPS28-204ENST00000526054 ADI1Q9BV57 179 aa8.65□□□□□ -1.02
VPS28-204ENST00000526054 C1QTNF5Q9BXJ0 243 aa8.65□□□□□ -1.02
VPS28-204ENST00000526054 TPK1Q9H3S4 243 aa8.65□□□□□ -1.02
VPS28-204ENST00000526054 SP140LQ9H930 580 aa8.65□□□□□ -1.02
VPS28-204ENST00000526054 CLN6Q9NWW5 311 aa8.65□□□□□ -1.02
VPS28-204ENST00000526054 RAB26Q9ULW5 256 aa8.65□□□□□ -1.02
VPS28-204ENST00000526054 LRRC42Q9Y546 428 aa8.65□□□□□ -1.02
VPS28-204ENST00000526054 TMEM129A0AVI4 362 aa8.64□□□□□ -1.03
VPS28-204ENST00000526054 IGHV3-13P01766 116 aa8.64□□□□□ -1.03
VPS28-204ENST00000526054 ADRA2AP08913 450 aa8.64□□□□□ -1.03
VPS28-204ENST00000526054 TACSTD2P09758 323 aa8.64□□□□□ -1.03
VPS28-204ENST00000526054 GABRB1P18505 474 aa8.64□□□□□ -1.03
VPS28-204ENST00000526054 SRP14P37108 136 aaKnown RBP8.64□□□□□ -1.03
VPS28-204ENST00000526054 CAPGP40121 348 aa8.64□□□□□ -1.03
VPS28-204ENST00000526054 OPRL1P41146 370 aa8.64□□□□□ -1.03
VPS28-204ENST00000526054 MTNR1AP48039 350 aa8.64□□□□□ -1.03
VPS28-204ENST00000526054 CX3CR1P49238 355 aa8.64□□□□□ -1.03
VPS28-204ENST00000526054 IL5RAQ01344 420 aa8.64□□□□□ -1.03
VPS28-204ENST00000526054 MALLQ13021 153 aa8.64□□□□□ -1.03
VPS28-204ENST00000526054 IL18R1Q13478 541 aa8.64□□□□□ -1.03
VPS28-204ENST00000526054 RSPO1Q2MKA7 263 aaPredicted RBP8.64□□□□□ -1.03
VPS28-204ENST00000526054 ZMAT1Q5H9K5 638 aa8.64□□□□□ -1.03
VPS28-204ENST00000526054 DEGS2Q6QHC5 323 aa8.64□□□□□ -1.03
VPS28-204ENST00000526054 COLCA1Q6ZS62 124 aa8.64□□□□□ -1.03
VPS28-204ENST00000526054 LRP11Q86VZ4 500 aa8.64□□□□□ -1.03
VPS28-204ENST00000526054 ENTHD1Q8IYW4 607 aa8.64□□□□□ -1.03
VPS28-204ENST00000526054 ZNF786Q8N393 782 aa8.64□□□□□ -1.03
VPS28-204ENST00000526054 LINC01356Q8N9X3 169 aa8.64□□□□□ -1.03
VPS28-204ENST00000526054 UBASH3BQ8TF42 649 aa8.64□□□□□ -1.03
VPS28-204ENST00000526054 UBE2FQ969M7 185 aa8.64□□□□□ -1.03
VPS28-204ENST00000526054 AMELYQ99218 206 aa8.64□□□□□ -1.03
VPS28-204ENST00000526054 MROQ9BYG7 248 aa8.64□□□□□ -1.03
VPS28-204ENST00000526054 MS4A5Q9H3V2 200 aa8.64□□□□□ -1.03
VPS28-204ENST00000526054 NIPAL2Q9H841 368 aa8.64□□□□□ -1.03
VPS28-204ENST00000526054 PTTG3PQ9NZH4 202 aa8.64□□□□□ -1.03
VPS28-204ENST00000526054 TAAR3PQ9P1P4 343 aa8.64□□□□□ -1.03
VPS28-204ENST00000526054 CGGBP1Q9UFW8 167 aaPredicted RBP8.64□□□□□ -1.03
VPS28-204ENST00000526054 IKZF2Q9UKS7 526 aa8.64□□□□□ -1.03
VPS28-204ENST00000526054 KLHDC2Q9Y2U9 406 aa8.64□□□□□ -1.03
VPS28-204ENST00000526054 STARD10Q9Y365 291 aa8.64□□□□□ -1.03
VPS28-204ENST00000526054 PLSCR5A0PG75 271 aa8.63□□□□□ -1.03
VPS28-204ENST00000526054 H0YAE9 185 aa8.63□□□□□ -1.03
VPS28-204ENST00000526054 XRCC2O43543 280 aa8.63□□□□□ -1.03
VPS28-204ENST00000526054 TCF21O43680 179 aa8.63□□□□□ -1.03
VPS28-204ENST00000526054 TIMM8AO60220 97 aaPredicted RBP8.63□□□□□ -1.03
VPS28-204ENST00000526054 LILRA1O75019 489 aa8.63□□□□□ -1.03
VPS28-204ENST00000526054 ZNF254O75437 659 aa8.63□□□□□ -1.03
VPS28-204ENST00000526054 CLPTM1O96005 669 aa8.63□□□□□ -1.03
VPS28-204ENST00000526054 ANXA2P07355 339 aaKnown RBP8.63□□□□□ -1.03
VPS28-204ENST00000526054 OR2T7P0C7T2 308 aa8.63□□□□□ -1.03
VPS28-204ENST00000526054 RAC2P15153 192 aa8.63□□□□□ -1.03
VPS28-204ENST00000526054 SELEP16581 610 aa8.63□□□□□ -1.03
VPS28-204ENST00000526054 LIPAP38571 399 aa8.63□□□□□ -1.03
VPS28-204ENST00000526054 MPV17P39210 176 aa8.63□□□□□ -1.03
VPS28-204ENST00000526054 ALDH3B1P43353 468 aa8.63□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 53.3 ms