RNA–Protein interactions for RNA: ENST00000526025.1

CD44-222, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 2 BASIC

Gene CD44, Length 1,052 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-222ENST00000526025 A0A1W2PPW3 197 aa17.76■□□□□ 0.43
CD44-222ENST00000526025 CLPTM1O96005 669 aa17.76■□□□□ 0.43
CD44-222ENST00000526025 MT-ND5P03915 603 aa17.76■□□□□ 0.43
CD44-222ENST00000526025 PSG7Q13046 419 aa17.76■□□□□ 0.43
CD44-222ENST00000526025 GALEQ14376 348 aa17.76■□□□□ 0.43
CD44-222ENST00000526025 GK2Q14410 553 aaPredicted RBP17.76■□□□□ 0.43
CD44-222ENST00000526025 ZMAT1Q5H9K5 638 aa17.76■□□□□ 0.43
CD44-222ENST00000526025 C6orf141Q5SZD1 244 aa17.76■□□□□ 0.43
CD44-222ENST00000526025 FAM220AQ7Z4H9 259 aa17.76■□□□□ 0.43
CD44-222ENST00000526025 SYS1Q8N2H4 156 aa17.76■□□□□ 0.43
CD44-222ENST00000526025 CMBLQ96DG6 245 aa17.76■□□□□ 0.43
CD44-222ENST00000526025 FOXC2Q99958 501 aa17.76■□□□□ 0.43
CD44-222ENST00000526025 ZNF649Q9BS31 505 aa17.76■□□□□ 0.43
CD44-222ENST00000526025 REPIN1Q9BWE0 567 aaKnown RBP17.76■□□□□ 0.43
CD44-222ENST00000526025 MS4A5Q9H3V2 200 aa17.76■□□□□ 0.43
CD44-222ENST00000526025 ERVK13-1Q9NX77 482 aa17.76■□□□□ 0.43
CD44-222ENST00000526025 PTTG3PQ9NZH4 202 aa17.76■□□□□ 0.43
CD44-222ENST00000526025 TAAR3PQ9P1P4 343 aa17.76■□□□□ 0.43
CD44-222ENST00000526025 MYEF2Q9P2K5 600 aaKnown RBP17.76■□□□□ 0.43
CD44-222ENST00000526025 NUFIP1Q9UHK0 495 aaKnown RBP17.76■□□□□ 0.43
CD44-222ENST00000526025 PSORS1C1Q9UIG5 152 aa17.76■□□□□ 0.43
CD44-222ENST00000526025 PURGQ9UJV8 347 aaKnown RBP17.76■□□□□ 0.43
CD44-222ENST00000526025 DIMT1Q9UNQ2 313 aaKnown RBP17.76■□□□□ 0.43
CD44-222ENST00000526025 R4GMQ9 66 aa17.76■□□□□ 0.43
CD44-222ENST00000526025 CSMD1Q96PZ7 3565 aa17.76■□□□□ 0.43
CD44-222ENST00000526025 PRRC2AP48634 2157 aaKnown RBP17.75■□□□□ 0.43
CD44-222ENST00000526025 PSMD9O00233 223 aa17.75■□□□□ 0.43
CD44-222ENST00000526025 FAM20BO75063 409 aa17.75■□□□□ 0.43
CD44-222ENST00000526025 TACSTD2P09758 323 aa17.75■□□□□ 0.43
CD44-222ENST00000526025 SLC2A1P11166 492 aa17.75■□□□□ 0.43
CD44-222ENST00000526025 GLYATL3Q5SZD4 288 aa17.75■□□□□ 0.43
CD44-222ENST00000526025 LIPNQ5VXI9 398 aa17.75■□□□□ 0.43
CD44-222ENST00000526025 FAM57BQ71RH2 274 aa17.75■□□□□ 0.43
CD44-222ENST00000526025 YIPF7Q8N8F6 280 aa17.75■□□□□ 0.43
CD44-222ENST00000526025 HAVCR2Q8TDQ0 301 aa17.75■□□□□ 0.43
CD44-222ENST00000526025 GGHQ92820 318 aa17.75■□□□□ 0.43
CD44-222ENST00000526025 PGAM5Q96HS1 289 aa17.75■□□□□ 0.43
CD44-222ENST00000526025 TTTY10Q9BZA0 68 aa17.75■□□□□ 0.43
CD44-222ENST00000526025 DYNLRB1Q9NP97 96 aa17.75■□□□□ 0.43
CD44-222ENST00000526025 FKBP14Q9NWM8 211 aa17.75■□□□□ 0.43
CD44-222ENST00000526025 SNX5Q9Y5X3 404 aa17.75■□□□□ 0.43
CD44-222ENST00000526025 MYO9AB2RTY4 2548 aa17.74■□□□□ 0.43
CD44-222ENST00000526025 A0A0U1RQV5 110 aa17.74■□□□□ 0.43
CD44-222ENST00000526025 IQCF6A8MYZ5 107 aa17.74■□□□□ 0.43
CD44-222ENST00000526025 DENRO43583 198 aaKnown RBP17.74■□□□□ 0.43
CD44-222ENST00000526025 CCDC159P0C7I6 412 aa17.74■□□□□ 0.43
CD44-222ENST00000526025 PTH2RP49190 550 aa17.74■□□□□ 0.43
CD44-222ENST00000526025 MMP15P51511 669 aa17.74■□□□□ 0.43
CD44-222ENST00000526025 ZNF92Q03936 586 aa17.74■□□□□ 0.43
CD44-222ENST00000526025 MRPL28Q13084 256 aaKnown RBP17.74■□□□□ 0.43
CD44-222ENST00000526025 MED21Q13503 144 aa17.74■□□□□ 0.43
CD44-222ENST00000526025 HLXQ14774 488 aaPredicted RBP17.74■□□□□ 0.43
CD44-222ENST00000526025 NKPD1Q17RQ9 610 aa17.74■□□□□ 0.43
CD44-222ENST00000526025 TMEM255AQ5JRV8 349 aa17.74■□□□□ 0.43
CD44-222ENST00000526025 PGAP1Q75T13 922 aa17.74■□□□□ 0.43
CD44-222ENST00000526025 MRPL21Q7Z2W9 205 aaKnown RBP17.74■□□□□ 0.43
CD44-222ENST00000526025 TMEM80Q96HE8 168 aa17.74■□□□□ 0.43
CD44-222ENST00000526025 ALG8Q9BVK2 526 aa17.74■□□□□ 0.43
CD44-222ENST00000526025 BARX1Q9HBU1 254 aaPredicted RBP17.74■□□□□ 0.43
CD44-222ENST00000526025 EXOSC1Q9Y3B2 195 aaKnown RBP17.74■□□□□ 0.43
CD44-222ENST00000526025 PLSCR5A0PG75 271 aa17.73■□□□□ 0.43
CD44-222ENST00000526025 LOC110117498-PIK3R3F6TDL0 507 aa17.73■□□□□ 0.43
CD44-222ENST00000526025 SLC1A7O00341 560 aa17.73■□□□□ 0.43
CD44-222ENST00000526025 TBX1O43435 398 aa17.73■□□□□ 0.43
CD44-222ENST00000526025 TIMM8AO60220 97 aaPredicted RBP17.73■□□□□ 0.43
CD44-222ENST00000526025 ERCC1P07992 297 aaPredicted RBP17.73■□□□□ 0.43
CD44-222ENST00000526025 ADH4P08319 380 aa17.73■□□□□ 0.43
CD44-222ENST00000526025 ANOS1P23352 680 aa17.73■□□□□ 0.43
CD44-222ENST00000526025 CDKN1AP38936 164 aa17.73■□□□□ 0.43
CD44-222ENST00000526025 TIGD6Q17RP2 521 aa17.73■□□□□ 0.43
CD44-222ENST00000526025 FDX2Q6P4F2 183 aa17.73■□□□□ 0.43
CD44-222ENST00000526025 BPIFB6Q8NFQ5 453 aa17.73■□□□□ 0.43
CD44-222ENST00000526025 OR8B12Q8NGG6 310 aa17.73■□□□□ 0.43
CD44-222ENST00000526025 SGK3Q96BR1 496 aa17.73■□□□□ 0.43
CD44-222ENST00000526025 PBOV1Q9GZY1 135 aa17.73■□□□□ 0.43
CD44-222ENST00000526025 RAB1BQ9H0U4 201 aa17.73■□□□□ 0.43
CD44-222ENST00000526025 CXXC4Q9H2H0 198 aa17.73■□□□□ 0.43
CD44-222ENST00000526025 G6PC2Q9NQR9 355 aa17.73■□□□□ 0.43
CD44-222ENST00000526025 NKIRAS2Q9NYR9 191 aa17.73■□□□□ 0.43
CD44-222ENST00000526025 ZNF319Q9P2F9 582 aa17.73■□□□□ 0.43
CD44-222ENST00000526025 GNG8Q9UK08 70 aa17.73■□□□□ 0.43
CD44-222ENST00000526025 TEX15Q9BXT5 2789 aa17.72■□□□□ 0.43
CD44-222ENST00000526025 A0A1B0GWJ7 208 aa17.72■□□□□ 0.43
CD44-222ENST00000526025 C5orf63A6NC05 138 aa17.72■□□□□ 0.43
CD44-222ENST00000526025 CYSRT1A8MQ03 144 aa17.72■□□□□ 0.43
CD44-222ENST00000526025 C17orf100A8MU93 164 aa17.72■□□□□ 0.43
CD44-222ENST00000526025 MAGEB4O15481 346 aaPredicted RBP17.72■□□□□ 0.43
CD44-222ENST00000526025 XPNPEP2O43895 674 aa17.72■□□□□ 0.43
CD44-222ENST00000526025 PNPP00491 289 aa17.72■□□□□ 0.43
CD44-222ENST00000526025 IGLV3-1P01715 115 aa17.72■□□□□ 0.43
CD44-222ENST00000526025 ADRA2AP08913 450 aa17.72■□□□□ 0.43
CD44-222ENST00000526025 LIMS3P0CW19 117 aa17.72■□□□□ 0.43
CD44-222ENST00000526025 LIMS4P0CW20 117 aa17.72■□□□□ 0.43
CD44-222ENST00000526025 MYL12AP19105 171 aa17.72■□□□□ 0.43
CD44-222ENST00000526025 DDOSTP39656 456 aa17.72■□□□□ 0.43
CD44-222ENST00000526025 ALDH3B1P43353 468 aa17.72■□□□□ 0.43
CD44-222ENST00000526025 ST3GAL4Q11206 333 aa17.72■□□□□ 0.43
CD44-222ENST00000526025 PCGF3Q3KNV8 242 aa17.72■□□□□ 0.43
CD44-222ENST00000526025 TP53I3Q53FA7 332 aa17.72■□□□□ 0.43
CD44-222ENST00000526025 RNLSQ5VYX0 342 aa17.72■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms