RNA–Protein interactions for RNA: ENST00000522987.1

MRPS28-209, Transcript of mitochondrial ribosomal protein S28, humanhuman

TSL 3

Gene MRPS28, Length 487 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPS28-209ENST00000522987 POM121CA8CG34 1229 aa12.81□□□□□ -0.36
MRPS28-209ENST00000522987 M0R135 149 aa12.81□□□□□ -0.36
MRPS28-209ENST00000522987 PHYHO14832 338 aa12.81□□□□□ -0.36
MRPS28-209ENST00000522987 ADAM20O43506 726 aa12.81□□□□□ -0.36
MRPS28-209ENST00000522987 ENSAO43768 121 aaKnown RBP12.81□□□□□ -0.36
MRPS28-209ENST00000522987 OR10H3O60404 316 aa12.81□□□□□ -0.36
MRPS28-209ENST00000522987 CCDC22O60826 627 aa12.81□□□□□ -0.36
MRPS28-209ENST00000522987 GYPAP02724 150 aa12.81□□□□□ -0.36
MRPS28-209ENST00000522987 CRYBA1P05813 215 aa12.81□□□□□ -0.36
MRPS28-209ENST00000522987 GRPP07492 148 aa12.81□□□□□ -0.36
MRPS28-209ENST00000522987 PPIAL4GP0DN37 164 aa12.81□□□□□ -0.36
MRPS28-209ENST00000522987 SLC2A1P11166 492 aa12.81□□□□□ -0.36
MRPS28-209ENST00000522987 CFHR2P36980 270 aa12.81□□□□□ -0.36
MRPS28-209ENST00000522987 CD200P41217 278 aa12.81□□□□□ -0.36
MRPS28-209ENST00000522987 GATA4P43694 442 aa12.81□□□□□ -0.36
MRPS28-209ENST00000522987 RAD23AP54725 363 aa12.81□□□□□ -0.36
MRPS28-209ENST00000522987 RAG2P55895 527 aa12.81□□□□□ -0.36
MRPS28-209ENST00000522987 ELF3P78545 371 aaPredicted RBP12.81□□□□□ -0.36
MRPS28-209ENST00000522987 RELBQ01201 579 aa12.81□□□□□ -0.36
MRPS28-209ENST00000522987 ZNF92Q03936 586 aa12.81□□□□□ -0.36
MRPS28-209ENST00000522987 PRB3Q04118 309 aaPredicted RBP12.81□□□□□ -0.36
MRPS28-209ENST00000522987 KHDRBS1Q07666 443 aaKnown RBP eCLIP12.81□□□□□ -0.36
MRPS28-209ENST00000522987 KRTAP27-1Q3LI81 207 aa12.81□□□□□ -0.36
MRPS28-209ENST00000522987 SLC36A3Q495N2 470 aa12.81□□□□□ -0.36
MRPS28-209ENST00000522987 PDLIM3Q53GG5 364 aaPredicted RBP12.81□□□□□ -0.36
MRPS28-209ENST00000522987 ZNRF4Q8WWF5 429 aa12.81□□□□□ -0.36
MRPS28-209ENST00000522987 ZNF799Q96GE5 643 aa12.81□□□□□ -0.36
MRPS28-209ENST00000522987 DHRS1Q96LJ7 313 aa12.81□□□□□ -0.36
MRPS28-209ENST00000522987 TBX15Q96SF7 602 aa12.81□□□□□ -0.36
MRPS28-209ENST00000522987 EGLN3Q9H6Z9 239 aa12.81□□□□□ -0.36
MRPS28-209ENST00000522987 ZNF446Q9NWS9 450 aa12.81□□□□□ -0.36
MRPS28-209ENST00000522987 PDP1Q9P0J1 537 aaPredicted RBP12.81□□□□□ -0.36
MRPS28-209ENST00000522987 RNF7Q9UBF6 113 aa12.81□□□□□ -0.36
MRPS28-209ENST00000522987 ABCD2Q9UBJ2 740 aa12.81□□□□□ -0.36
MRPS28-209ENST00000522987 CYB5R1Q9UHQ9 305 aa12.81□□□□□ -0.36
MRPS28-209ENST00000522987 SAMD4AQ9UPU9 718 aaKnown RBP12.81□□□□□ -0.36
MRPS28-209ENST00000522987 CMYA5Q8N3K9 4069 aa12.8□□□□□ -0.36
MRPS28-209ENST00000522987 hCG_1807616A0A1W2PRN6 198 aa12.8□□□□□ -0.36
MRPS28-209ENST00000522987 GGT3PA6NGU5 568 aa12.8□□□□□ -0.36
MRPS28-209ENST00000522987 A6NLC8 198 aa12.8□□□□□ -0.36
MRPS28-209ENST00000522987 CD300LBA8K4G0 201 aa12.8□□□□□ -0.36
MRPS28-209ENST00000522987 SRRM5B3KS81 715 aa12.8□□□□□ -0.36
MRPS28-209ENST00000522987 GMNNO75496 209 aa12.8□□□□□ -0.36
MRPS28-209ENST00000522987 TOX4O94842 621 aa12.8□□□□□ -0.36
MRPS28-209ENST00000522987 PRKXP51817 358 aa12.8□□□□□ -0.36
MRPS28-209ENST00000522987 TPTEP56180 551 aa12.8□□□□□ -0.36
MRPS28-209ENST00000522987 GLYATL3Q5SZD4 288 aa12.8□□□□□ -0.36
MRPS28-209ENST00000522987 HACD2Q6Y1H2 254 aa12.8□□□□□ -0.36
MRPS28-209ENST00000522987 OR9Q1Q8NGQ5 310 aa12.8□□□□□ -0.36
MRPS28-209ENST00000522987 WFDC12Q8WWY7 111 aa12.8□□□□□ -0.36
MRPS28-209ENST00000522987 LHX4Q969G2 390 aa12.8□□□□□ -0.36
MRPS28-209ENST00000522987 FN3KRPQ9HA64 309 aa12.8□□□□□ -0.36
MRPS28-209ENST00000522987 C1orf123Q9NWV4 160 aa12.8□□□□□ -0.36
MRPS28-209ENST00000522987 C1RLQ9NZP8 487 aa12.8□□□□□ -0.36
MRPS28-209ENST00000522987 ERVK-18Q9QC07 812 aa12.8□□□□□ -0.36
MRPS28-209ENST00000522987 A0A1B0GWJ7 208 aa12.79□□□□□ -0.36
MRPS28-209ENST00000522987 LGALS8O00214 317 aa12.79□□□□□ -0.36
MRPS28-209ENST00000522987 FCN3O75636 299 aa12.79□□□□□ -0.36
MRPS28-209ENST00000522987 MELTFP08582 738 aa12.79□□□□□ -0.36
MRPS28-209ENST00000522987 ZNF823P16415 610 aa12.79□□□□□ -0.36
MRPS28-209ENST00000522987 RRM2P31350 389 aa12.79□□□□□ -0.36
MRPS28-209ENST00000522987 PSMB10P40306 273 aa12.79□□□□□ -0.36
MRPS28-209ENST00000522987 ARF6P62330 175 aa12.79□□□□□ -0.36
MRPS28-209ENST00000522987 ECH1Q13011 328 aa12.79□□□□□ -0.36
MRPS28-209ENST00000522987 BRICD5Q6PL45 260 aa12.79□□□□□ -0.36
MRPS28-209ENST00000522987 Q6YL49 198 aa12.79□□□□□ -0.36
MRPS28-209ENST00000522987 C17orf107Q6ZR85 190 aa12.79□□□□□ -0.36
MRPS28-209ENST00000522987 ZBTB46Q86UZ6 589 aa12.79□□□□□ -0.36
MRPS28-209ENST00000522987 PROKR2Q8NFJ6 384 aa12.79□□□□□ -0.36
MRPS28-209ENST00000522987 Q8TCH9 128 aa12.79□□□□□ -0.36
MRPS28-209ENST00000522987 PYURFQ96I23 114 aa12.79□□□□□ -0.36
MRPS28-209ENST00000522987 CCT8L2Q96SF2 557 aa12.79□□□□□ -0.36
MRPS28-209ENST00000522987 ELAC2Q9BQ52 826 aaKnown RBP12.79□□□□□ -0.36
MRPS28-209ENST00000522987 FAM107BQ9H098 131 aa12.79□□□□□ -0.36
MRPS28-209ENST00000522987 SLITRK2Q9H156 845 aa12.79□□□□□ -0.36
MRPS28-209ENST00000522987 DNAJB11Q9UBS4 358 aa12.79□□□□□ -0.36
MRPS28-209ENST00000522987 CENPVL3A0A0U1RRI6 287 aa12.78□□□□□ -0.36
MRPS28-209ENST00000522987 A0A1B0GW55 424 aa12.78□□□□□ -0.36
MRPS28-209ENST00000522987 ZNF879B4DU55 563 aa12.78□□□□□ -0.36
MRPS28-209ENST00000522987 ARPC3O15145 178 aa12.78□□□□□ -0.36
MRPS28-209ENST00000522987 GYPBP06028 91 aa12.78□□□□□ -0.36
MRPS28-209ENST00000522987 SPARCP09486 303 aa12.78□□□□□ -0.36
MRPS28-209ENST00000522987 DUX4L2P0CJ85 424 aa12.78□□□□□ -0.36
MRPS28-209ENST00000522987 DUX4L3P0CJ86 424 aa12.78□□□□□ -0.36
MRPS28-209ENST00000522987 DUX4L4P0CJ87 422 aa12.78□□□□□ -0.36
MRPS28-209ENST00000522987 DUX4L5P0CJ88 424 aa12.78□□□□□ -0.36
MRPS28-209ENST00000522987 DUX4L6P0CJ89 424 aa12.78□□□□□ -0.36
MRPS28-209ENST00000522987 DUX4L7P0CJ90 424 aa12.78□□□□□ -0.36
MRPS28-209ENST00000522987 KRTAP10-3P60369 221 aa12.78□□□□□ -0.36
MRPS28-209ENST00000522987 PPP1R8Q12972 351 aaKnown RBP12.78□□□□□ -0.36
MRPS28-209ENST00000522987 DUX4L9Q6RFH8 374 aaPredicted RBP12.78□□□□□ -0.36
MRPS28-209ENST00000522987 DCXRQ7Z4W1 244 aa12.78□□□□□ -0.36
MRPS28-209ENST00000522987 OR9Q2Q8NGE9 314 aa12.78□□□□□ -0.36
MRPS28-209ENST00000522987 OR56B2PQ8NGI1 322 aa12.78□□□□□ -0.36
MRPS28-209ENST00000522987 SPTSSAQ969W0 71 aa12.78□□□□□ -0.36
MRPS28-209ENST00000522987 WDFY2Q96P53 400 aa12.78□□□□□ -0.36
MRPS28-209ENST00000522987 COPS4Q9BT78 406 aa12.78□□□□□ -0.36
MRPS28-209ENST00000522987 SEMA6AQ9H2E6 1030 aa12.78□□□□□ -0.36
MRPS28-209ENST00000522987 CCDC134Q9H6E4 229 aa12.78□□□□□ -0.36
MRPS28-209ENST00000522987 BEX1Q9HBH7 125 aa12.78□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms