RNA–Protein interactions for RNA: ENST00000522557.1

HMGB1P1-201, Transcript of high mobility group box 1 pseudogene 1, humanhuman

BASIC

Gene HMGB1P1, Length 636 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P1-201ENST00000522557 CEACAM6P40199 344 aa2.89□□□□□ -1.95
HMGB1P1-201ENST00000522557 CYB561P49447 251 aa2.89□□□□□ -1.95
HMGB1P1-201ENST00000522557 SERPINB8P50452 374 aa2.89□□□□□ -1.95
HMGB1P1-201ENST00000522557 CARD18P57730 90 aa2.89□□□□□ -1.95
HMGB1P1-201ENST00000522557 ATP6V0D1P61421 351 aa2.89□□□□□ -1.95
HMGB1P1-201ENST00000522557 PPP1CBP62140 327 aa2.89□□□□□ -1.95
HMGB1P1-201ENST00000522557 CDH17Q12864 832 aa2.89□□□□□ -1.95
HMGB1P1-201ENST00000522557 DNAJC3Q13217 504 aa2.89□□□□□ -1.95
HMGB1P1-201ENST00000522557 SLC39A6Q13433 755 aa2.89□□□□□ -1.95
HMGB1P1-201ENST00000522557 RCAN2Q14206 197 aa2.89□□□□□ -1.95
HMGB1P1-201ENST00000522557 PRPSAP1Q14558 356 aa2.89□□□□□ -1.95
HMGB1P1-201ENST00000522557 Q5W150 140 aa2.89□□□□□ -1.95
HMGB1P1-201ENST00000522557 ULK3Q6PHR2 472 aa2.89□□□□□ -1.95
HMGB1P1-201ENST00000522557 PLET1Q6UQ28 207 aa2.89□□□□□ -1.95
HMGB1P1-201ENST00000522557 ANGPTL8Q6UXH0 198 aa2.89□□□□□ -1.95
HMGB1P1-201ENST00000522557 NCCRP1Q6ZVX7 275 aaPredicted RBP2.89□□□□□ -1.95
HMGB1P1-201ENST00000522557 KRTAP5-5Q701N2 237 aaPredicted RBP2.89□□□□□ -1.95
HMGB1P1-201ENST00000522557 DEFB132Q7Z7B7 95 aa2.89□□□□□ -1.95
HMGB1P1-201ENST00000522557 VTCN1Q7Z7D3 282 aa2.89□□□□□ -1.95
HMGB1P1-201ENST00000522557 HORMAD1Q86X24 394 aa2.89□□□□□ -1.95
HMGB1P1-201ENST00000522557 ZNF786Q8N393 782 aa2.89□□□□□ -1.95
HMGB1P1-201ENST00000522557 CHST4Q8NCG5 386 aa2.89□□□□□ -1.95
HMGB1P1-201ENST00000522557 ABHD3Q8WU67 409 aa2.89□□□□□ -1.95
HMGB1P1-201ENST00000522557 RGP1Q92546 391 aaPredicted RBP2.89□□□□□ -1.95
HMGB1P1-201ENST00000522557 FAM19A4Q96LR4 140 aa2.89□□□□□ -1.95
HMGB1P1-201ENST00000522557 UVRAGQ9P2Y5 699 aa2.89□□□□□ -1.95
HMGB1P1-201ENST00000522557 NCOA3Q9Y6Q9 1424 aa2.89□□□□□ -1.95
HMGB1P1-201ENST00000522557 KIDINS220Q9ULH0 1771 aa2.89□□□□□ -1.95
HMGB1P1-201ENST00000522557 ABCA6Q8N139 1617 aa2.89□□□□□ -1.95
HMGB1P1-201ENST00000522557 LRRC9Q6ZRR7 1453 aa2.89□□□□□ -1.95
HMGB1P1-201ENST00000522557 PCDH11XQ9BZA7 1347 aa2.89□□□□□ -1.95
HMGB1P1-201ENST00000522557 C2orf16Q68DN1 1984 aa2.89□□□□□ -1.95
HMGB1P1-201ENST00000522557 MROH2AA6NES4 1674 aa2.88□□□□□ -1.95
HMGB1P1-201ENST00000522557 COL4A4P53420 1690 aaPredicted RBP2.88□□□□□ -1.95
HMGB1P1-201ENST00000522557 CLTCQ00610 1675 aaKnown RBP2.88□□□□□ -1.95
HMGB1P1-201ENST00000522557 SYCP2Q9BX26 1530 aa2.88□□□□□ -1.95
HMGB1P1-201ENST00000522557 PALLDQ8WX93 1383 aa2.88□□□□□ -1.95
HMGB1P1-201ENST00000522557 ANKRD12Q6UB98 2062 aa2.88□□□□□ -1.95
HMGB1P1-201ENST00000522557 TRAV6A0A075B6T7 132 aa2.88□□□□□ -1.95
HMGB1P1-201ENST00000522557 IGHV5-10-1A0A0J9YXX1 117 aa2.88□□□□□ -1.95
HMGB1P1-201ENST00000522557 CIB4A0PJX0 185 aa2.88□□□□□ -1.95
HMGB1P1-201ENST00000522557 C11orf94C9JXX5 98 aa2.88□□□□□ -1.95
HMGB1P1-201ENST00000522557 XRCC2O43543 280 aa2.88□□□□□ -1.95
HMGB1P1-201ENST00000522557 ZNF207O43670 478 aaKnown RBP2.88□□□□□ -1.95
HMGB1P1-201ENST00000522557 FARS2O95363 451 aaKnown RBP2.88□□□□□ -1.95
HMGB1P1-201ENST00000522557 FABP3P05413 133 aa2.88□□□□□ -1.95
HMGB1P1-201ENST00000522557 BCHEP06276 602 aa2.88□□□□□ -1.95
HMGB1P1-201ENST00000522557 EIF4EP06730 217 aaKnown RBP2.88□□□□□ -1.95
HMGB1P1-201ENST00000522557 UBE2AP49459 152 aa2.88□□□□□ -1.95
HMGB1P1-201ENST00000522557 SYNJ2BPP57105 145 aa2.88□□□□□ -1.95
HMGB1P1-201ENST00000522557 TAS2R39P59534 338 aa2.88□□□□□ -1.95
HMGB1P1-201ENST00000522557 LCN2P80188 198 aa2.88□□□□□ -1.95
HMGB1P1-201ENST00000522557 ZNF33AQ06730 810 aa2.88□□□□□ -1.95
HMGB1P1-201ENST00000522557 IFT88Q13099 833 aa2.88□□□□□ -1.95
HMGB1P1-201ENST00000522557 C5orf64Q2M2E5 130 aa2.88□□□□□ -1.95
HMGB1P1-201ENST00000522557 TSPO2Q5TGU0 170 aa2.88□□□□□ -1.95
HMGB1P1-201ENST00000522557 VKORC1L1Q8N0U8 176 aa2.88□□□□□ -1.95
HMGB1P1-201ENST00000522557 GATSQ8NAP1 163 aa2.88□□□□□ -1.95
HMGB1P1-201ENST00000522557 ITFG1Q8TB96 612 aa2.88□□□□□ -1.95
HMGB1P1-201ENST00000522557 EXOSC8Q96B26 276 aaKnown RBP2.88□□□□□ -1.95
HMGB1P1-201ENST00000522557 BTN2A3PQ96KV6 586 aa2.88□□□□□ -1.95
HMGB1P1-201ENST00000522557 SLC17A7Q9P2U7 560 aa2.88□□□□□ -1.95
HMGB1P1-201ENST00000522557 ZNF282Q9UDV7 671 aaPredicted RBP2.88□□□□□ -1.95
HMGB1P1-201ENST00000522557 TBX21Q9UL17 535 aa2.88□□□□□ -1.95
HMGB1P1-201ENST00000522557 TSSC4Q9Y5U2 329 aaPredicted RBP2.88□□□□□ -1.95
HMGB1P1-201ENST00000522557 CDK12Q9NYV4 1490 aaPredicted RBP2.88□□□□□ -1.95
HMGB1P1-201ENST00000522557 MBD5Q9P267 1494 aa2.88□□□□□ -1.95
HMGB1P1-201ENST00000522557 NUP214P35658 2090 aaPredicted RBP2.88□□□□□ -1.95
HMGB1P1-201ENST00000522557 PCM1Q15154 2024 aa2.87□□□□□ -1.95
HMGB1P1-201ENST00000522557 IGLV1-50A0A075B6I6 118 aa2.87□□□□□ -1.95
HMGB1P1-201ENST00000522557 ARPC4-TTLL3A0A0A6YYG9 625 aa2.87□□□□□ -1.95
HMGB1P1-201ENST00000522557 A0A0J9YXV3 536 aa2.87□□□□□ -1.95
HMGB1P1-201ENST00000522557 ANKRD65E5RJM6 399 aa2.87□□□□□ -1.95
HMGB1P1-201ENST00000522557 ANGPTL7O43827 346 aa2.87□□□□□ -1.95
HMGB1P1-201ENST00000522557 GMDSO60547 372 aa2.87□□□□□ -1.95
HMGB1P1-201ENST00000522557 NMT2O60551 498 aa2.87□□□□□ -1.95
HMGB1P1-201ENST00000522557 SLC25A27O95847 323 aa2.87□□□□□ -1.95
HMGB1P1-201ENST00000522557 PRB2P02812 416 aaPredicted RBP2.87□□□□□ -1.95
HMGB1P1-201ENST00000522557 HLA-DPB1P04440 258 aa2.87□□□□□ -1.95
HMGB1P1-201ENST00000522557 ERGP11308 486 aa2.87□□□□□ -1.95
HMGB1P1-201ENST00000522557 PRPS2P11908 318 aa2.87□□□□□ -1.95
HMGB1P1-201ENST00000522557 GFAPP14136 432 aa2.87□□□□□ -1.95
HMGB1P1-201ENST00000522557 WARSP23381 471 aaKnown RBP2.87□□□□□ -1.95
HMGB1P1-201ENST00000522557 LONP1P36776 959 aaKnown RBP2.87□□□□□ -1.95
HMGB1P1-201ENST00000522557 GPR1P46091 355 aa2.87□□□□□ -1.95
HMGB1P1-201ENST00000522557 CSNK1A1P48729 337 aa2.87□□□□□ -1.95
HMGB1P1-201ENST00000522557 CCNG1P51959 295 aa2.87□□□□□ -1.95
HMGB1P1-201ENST00000522557 LOXL1Q08397 574 aaPredicted RBP2.87□□□□□ -1.95
HMGB1P1-201ENST00000522557 TCP10Q12799 353 aa2.87□□□□□ -1.95
HMGB1P1-201ENST00000522557 IRF4Q15306 451 aa2.87□□□□□ -1.95
HMGB1P1-201ENST00000522557 ABHD12BQ7Z5M8 362 aaPredicted RBP2.87□□□□□ -1.95
HMGB1P1-201ENST00000522557 FAM71AQ8IYT1 594 aa2.87□□□□□ -1.95
HMGB1P1-201ENST00000522557 C15orf40Q8WUR7 153 aa2.87□□□□□ -1.95
HMGB1P1-201ENST00000522557 NTAN1Q96AB6 310 aa2.87□□□□□ -1.95
HMGB1P1-201ENST00000522557 KIAA1143Q96AT1 154 aaPredicted RBP2.87□□□□□ -1.95
HMGB1P1-201ENST00000522557 SGTBQ96EQ0 304 aa2.87□□□□□ -1.95
HMGB1P1-201ENST00000522557 CEP170P1Q96L14 293 aa2.87□□□□□ -1.95
HMGB1P1-201ENST00000522557 C12orf10Q9HB07 376 aa2.87□□□□□ -1.95
HMGB1P1-201ENST00000522557 ERVK-7P63135 1459 aa2.87□□□□□ -1.95
HMGB1P1-201ENST00000522557 CCDC141Q6ZP82 1450 aa2.87□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms