RNA–Protein interactions for RNA: ENST00000520602.5

MCF2-209, Transcript of MCF.2 cell line derived transforming sequence, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene MCF2, Length 3,945 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2-209ENST00000520602 PGAP1Q75T13 922 aa9.03□□□□□ -0.96
MCF2-209ENST00000520602 DOK3Q7L591 496 aa9.03□□□□□ -0.96
MCF2-209ENST00000520602 PHB2Q99623 299 aa9.03□□□□□ -0.96
MCF2-209ENST00000520602 CRLF2Q9HC73 371 aa9.03□□□□□ -0.96
MCF2-209ENST00000520602 MCTS1Q9ULC4 181 aaKnown RBP9.03□□□□□ -0.96
MCF2-209ENST00000520602 HS3ST3B1Q9Y662 390 aa9.03□□□□□ -0.96
MCF2-209ENST00000520602 SPTA1P02549 2419 aa9.03□□□□□ -0.96
MCF2-209ENST00000520602 CLDN15P56746 228 aa9.03□□□□□ -0.96
MCF2-209ENST00000520602 SIGLEC14Q08ET2 396 aa9.03□□□□□ -0.96
MCF2-209ENST00000520602 PLA2G7Q13093 441 aa9.03□□□□□ -0.96
MCF2-209ENST00000520602 BCL2A1Q16548 175 aa9.03□□□□□ -0.96
MCF2-209ENST00000520602 GALNT11Q8NCW6 608 aa9.03□□□□□ -0.96
MCF2-209ENST00000520602 CPNE2Q96FN4 548 aaPredicted RBP9.03□□□□□ -0.96
MCF2-209ENST00000520602 OR2S2Q9NQN1 319 aa9.03□□□□□ -0.96
MCF2-209ENST00000520602 EHFQ9NZC4 300 aa9.03□□□□□ -0.96
MCF2-209ENST00000520602 KCNN3Q9UGI6 736 aa9.03□□□□□ -0.96
MCF2-209ENST00000520602 A0A087WZY1 265 aa9.03□□□□□ -0.96
MCF2-209ENST00000520602 A0A096LPE4 126 aa9.03□□□□□ -0.96
MCF2-209ENST00000520602 TRBV5-5A0A0J9YX44 114 aa9.03□□□□□ -0.96
MCF2-209ENST00000520602 A0A1B0GUH1 482 aa9.03□□□□□ -0.96
MCF2-209ENST00000520602 A0A1W2PPZ6 126 aa9.03□□□□□ -0.96
MCF2-209ENST00000520602 ANKRD20A5PA0PJZ0 165 aa9.03□□□□□ -0.96
MCF2-209ENST00000520602 RAMP1O60894 148 aa9.03□□□□□ -0.96
MCF2-209ENST00000520602 PI3P19957 117 aa9.03□□□□□ -0.96
MCF2-209ENST00000520602 RGS19P49795 217 aa9.03□□□□□ -0.96
MCF2-209ENST00000520602 NPY4RP50391 375 aa9.03□□□□□ -0.96
MCF2-209ENST00000520602 FXYD4P59646 89 aa9.03□□□□□ -0.96
MCF2-209ENST00000520602 C3P1Q6ZMU1 363 aa9.03□□□□□ -0.96
MCF2-209ENST00000520602 MOB3CQ70IA8 216 aa9.03□□□□□ -0.96
MCF2-209ENST00000520602 NLRC3Q7RTR2 1065 aa9.03□□□□□ -0.96
MCF2-209ENST00000520602 WDR5BQ86VZ2 330 aa9.03□□□□□ -0.96
MCF2-209ENST00000520602 NFAM1Q8NET5 270 aaPredicted RBP9.03□□□□□ -0.96
MCF2-209ENST00000520602 OR56B1Q8NGI3 324 aa9.03□□□□□ -0.96
MCF2-209ENST00000520602 LIN37Q96GY3 246 aaPredicted RBP9.03□□□□□ -0.96
MCF2-209ENST00000520602 ZNF385AQ96PM9 386 aaKnown RBP9.03□□□□□ -0.96
MCF2-209ENST00000520602 ACKR4Q9NPB9 350 aa9.03□□□□□ -0.96
MCF2-209ENST00000520602 SLC23A1Q9UHI7 598 aa9.03□□□□□ -0.96
MCF2-209ENST00000520602 TCFL5Q9UL49 500 aa9.03□□□□□ -0.96
MCF2-209ENST00000520602 PCDH15Q96QU1 1955 aa9.03□□□□□ -0.96
MCF2-209ENST00000520602 CCDC163A0A0D9SF12 145 aa9.02□□□□□ -0.96
MCF2-209ENST00000520602 IGF2P01344 180 aa9.02□□□□□ -0.96
MCF2-209ENST00000520602 CD1AP06126 327 aa9.02□□□□□ -0.96
MCF2-209ENST00000520602 DBHP09172 617 aa9.02□□□□□ -0.96
MCF2-209ENST00000520602 RBMXP38159 391 aaKnown RBP9.02□□□□□ -0.96
MCF2-209ENST00000520602 SELENOPP49908 381 aa9.02□□□□□ -0.96
MCF2-209ENST00000520602 ZXDAP98168 799 aa9.02□□□□□ -0.96
MCF2-209ENST00000520602 RIN1Q13671 783 aa9.02□□□□□ -0.96
MCF2-209ENST00000520602 SPIN3Q5JUX0 258 aa9.02□□□□□ -0.96
MCF2-209ENST00000520602 SPINK14Q6IE38 97 aa9.02□□□□□ -0.96
MCF2-209ENST00000520602 ZNF546Q86UE3 836 aa9.02□□□□□ -0.96
MCF2-209ENST00000520602 LRRTM1Q86UE6 522 aa9.02□□□□□ -0.96
MCF2-209ENST00000520602 ELMOD2Q8IZ81 293 aa9.02□□□□□ -0.96
MCF2-209ENST00000520602 OR4D6Q8NGJ1 314 aa9.02□□□□□ -0.96
MCF2-209ENST00000520602 OR6X1Q8NH79 312 aa9.02□□□□□ -0.96
MCF2-209ENST00000520602 RNF133Q8WVZ7 376 aa9.02□□□□□ -0.96
MCF2-209ENST00000520602 KCNK17Q96T54 332 aa9.02□□□□□ -0.96
MCF2-209ENST00000520602 SLCO5A1Q9H2Y9 848 aa9.02□□□□□ -0.96
MCF2-209ENST00000520602 MRPS18BQ9Y676 258 aaKnown RBP9.02□□□□□ -0.96
MCF2-209ENST00000520602 OR14I1A6ND48 311 aa9.02□□□□□ -0.97
MCF2-209ENST00000520602 SDCBPO00560 298 aaPredicted RBP9.02□□□□□ -0.97
MCF2-209ENST00000520602 GSTZ1O43708 216 aaPredicted RBP9.02□□□□□ -0.97
MCF2-209ENST00000520602 NDUFB6O95139 128 aa9.02□□□□□ -0.97
MCF2-209ENST00000520602 EFNA3P52797 238 aa9.02□□□□□ -0.97
MCF2-209ENST00000520602 IFITM2Q01629 132 aa9.02□□□□□ -0.97
MCF2-209ENST00000520602 PLCXD3Q63HM9 321 aa9.02□□□□□ -0.97
MCF2-209ENST00000520602 GVQW1Q8N7I0 195 aa9.02□□□□□ -0.97
MCF2-209ENST00000520602 OR4D10Q8NGI6 311 aa9.02□□□□□ -0.97
MCF2-209ENST00000520602 ADAT3Q96EY9 351 aaPredicted RBP9.02□□□□□ -0.97
MCF2-209ENST00000520602 ZNF845Q96IR2 970 aaPredicted RBP9.02□□□□□ -0.97
MCF2-209ENST00000520602 CDC6Q99741 560 aa9.02□□□□□ -0.97
MCF2-209ENST00000520602 SOSTQ9BQB4 213 aa9.02□□□□□ -0.97
MCF2-209ENST00000520602 SLC25A21Q9BQT8 299 aaPredicted RBP9.02□□□□□ -0.97
MCF2-209ENST00000520602 COQ3Q9NZJ6 369 aa9.02□□□□□ -0.97
MCF2-209ENST00000520602 FBXO4Q9UKT5 387 aa9.02□□□□□ -0.97
MCF2-209ENST00000520602 PCDHGA1Q9Y5H4 931 aa9.02□□□□□ -0.97
MCF2-209ENST00000520602 DNAJC13O75165 2243 aa9.02□□□□□ -0.97
MCF2-209ENST00000520602 CIB4A0PJX0 185 aa9.02□□□□□ -0.97
MCF2-209ENST00000520602 AQP8O94778 261 aa9.02□□□□□ -0.97
MCF2-209ENST00000520602 TNFSF15O95150 251 aa9.02□□□□□ -0.97
MCF2-209ENST00000520602 ABHD16AO95870 558 aa9.02□□□□□ -0.97
MCF2-209ENST00000520602 WNT11O96014 354 aa9.02□□□□□ -0.97
MCF2-209ENST00000520602 FGF5P12034 268 aa9.02□□□□□ -0.97
MCF2-209ENST00000520602 HRH1P35367 487 aa9.02□□□□□ -0.97
MCF2-209ENST00000520602 OR9K2Q8NGE7 335 aa9.02□□□□□ -0.97
MCF2-209ENST00000520602 OR8B12Q8NGG6 310 aa9.02□□□□□ -0.97
MCF2-209ENST00000520602 OR2AE1Q8NHA4 323 aa9.02□□□□□ -0.97
MCF2-209ENST00000520602 CT55Q8WUE5 264 aa9.02□□□□□ -0.97
MCF2-209ENST00000520602 SLC39A7Q92504 469 aa9.02□□□□□ -0.97
MCF2-209ENST00000520602 HGDQ93099 445 aa9.02□□□□□ -0.97
MCF2-209ENST00000520602 SCMH1Q96GD3 660 aa9.02□□□□□ -0.97
MCF2-209ENST00000520602 WDR54Q9H977 334 aa9.02□□□□□ -0.97
MCF2-209ENST00000520602 ANKRD34BA5PLL1 514 aa9.01□□□□□ -0.97
MCF2-209ENST00000520602 CTDSPLO15194 276 aa9.01□□□□□ -0.97
MCF2-209ENST00000520602 ROM1Q03395 351 aa9.01□□□□□ -0.97
MCF2-209ENST00000520602 PCK2Q16822 640 aa9.01□□□□□ -0.97
MCF2-209ENST00000520602 CEACAM16Q2WEN9 425 aa9.01□□□□□ -0.97
MCF2-209ENST00000520602 GSG1LQ6UXU4 331 aa9.01□□□□□ -0.97
MCF2-209ENST00000520602 NHLRC1Q6VVB1 395 aa9.01□□□□□ -0.97
MCF2-209ENST00000520602 GLDNQ6ZMI3 551 aaPredicted RBP9.01□□□□□ -0.97
MCF2-209ENST00000520602 SPERTQ8NA61 448 aa9.01□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms