RNA–Protein interactions for RNA: ENST00000520234.1

HMGB1P41-201, Transcript of high mobility group box 1 pseudogene 41, humanhuman

BASIC

Gene HMGB1P41, Length 440 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P41-201ENST00000520234 GPR151Q8TDV0 419 aa2.51□□□□□ -2.01
HMGB1P41-201ENST00000520234 C2orf15Q8WU43 125 aaKnown RBP2.51□□□□□ -2.01
HMGB1P41-201ENST00000520234 SFT2D1Q8WV19 159 aa2.51□□□□□ -2.01
HMGB1P41-201ENST00000520234 FGF11Q92914 225 aa2.51□□□□□ -2.01
HMGB1P41-201ENST00000520234 SLC25A46Q96AG3 418 aa2.51□□□□□ -2.01
HMGB1P41-201ENST00000520234 MRPL38Q96DV4 380 aaKnown RBP2.51□□□□□ -2.01
HMGB1P41-201ENST00000520234 DTD2Q96FN9 168 aa2.51□□□□□ -2.01
HMGB1P41-201ENST00000520234 PPP1R36Q96LQ0 422 aa2.51□□□□□ -2.01
HMGB1P41-201ENST00000520234 COL21A1Q96P44 957 aa2.51□□□□□ -2.01
HMGB1P41-201ENST00000520234 ZBTB18Q99592 522 aa2.51□□□□□ -2.01
HMGB1P41-201ENST00000520234 GAL3ST1Q99999 423 aa2.51□□□□□ -2.01
HMGB1P41-201ENST00000520234 TMEM43Q9BTV4 400 aa2.51□□□□□ -2.01
HMGB1P41-201ENST00000520234 MED18Q9BUE0 208 aa2.51□□□□□ -2.01
HMGB1P41-201ENST00000520234 GPR174Q9BXC1 333 aa2.51□□□□□ -2.01
HMGB1P41-201ENST00000520234 ALX4Q9H161 411 aaPredicted RBP2.51□□□□□ -2.01
HMGB1P41-201ENST00000520234 IKZF5Q9H5V7 419 aa2.51□□□□□ -2.01
HMGB1P41-201ENST00000520234 PDFQ9HBH1 243 aa2.51□□□□□ -2.01
HMGB1P41-201ENST00000520234 EXOSC3Q9NQT5 275 aaKnown RBP2.51□□□□□ -2.01
HMGB1P41-201ENST00000520234 DYRK4Q9NR20 520 aa2.51□□□□□ -2.01
HMGB1P41-201ENST00000520234 HEBP1Q9NRV9 189 aa2.51□□□□□ -2.01
HMGB1P41-201ENST00000520234 DCAF13Q9NV06 445 aaKnown RBP2.51□□□□□ -2.01
HMGB1P41-201ENST00000520234 IMP3Q9NV31 184 aaKnown RBP2.51□□□□□ -2.01
HMGB1P41-201ENST00000520234 PRR34Q9NV39 138 aa2.51□□□□□ -2.01
HMGB1P41-201ENST00000520234 AIG1Q9NVV5 245 aa2.51□□□□□ -2.01
HMGB1P41-201ENST00000520234 NLE1Q9NVX2 485 aaPredicted RBP2.51□□□□□ -2.01
HMGB1P41-201ENST00000520234 ZNF226Q9NYT6 803 aa2.51□□□□□ -2.01
HMGB1P41-201ENST00000520234 COX16Q9P0S2 106 aa2.51□□□□□ -2.01
HMGB1P41-201ENST00000520234 PIPOXQ9P0Z9 390 aa2.51□□□□□ -2.01
HMGB1P41-201ENST00000520234 EXTL2Q9UBQ6 330 aa2.51□□□□□ -2.01
HMGB1P41-201ENST00000520234 SEC14L3Q9UDX4 400 aa2.51□□□□□ -2.01
HMGB1P41-201ENST00000520234 TP53TG3Q9ULZ0 132 aa2.51□□□□□ -2.01
HMGB1P41-201ENST00000520234 NDRG2Q9UN36 371 aaKnown RBP2.51□□□□□ -2.01
HMGB1P41-201ENST00000520234 SNX10Q9Y5X0 201 aa2.51□□□□□ -2.01
HMGB1P41-201ENST00000520234 PLXNA4Q9HCM2 1894 aa2.51□□□□□ -2.01
HMGB1P41-201ENST00000520234 PLXNA3P51805 1871 aa2.5□□□□□ -2.01
HMGB1P41-201ENST00000520234 NYNRINQ9P2P1 1898 aaKnown RBP2.5□□□□□ -2.01
HMGB1P41-201ENST00000520234 PLXNB2O15031 1838 aa2.5□□□□□ -2.01
HMGB1P41-201ENST00000520234 IGHV3OR16-12A0A075B7B8 117 aa2.5□□□□□ -2.01
HMGB1P41-201ENST00000520234 GLYATL1P3A0A0U1RQE8 302 aa2.5□□□□□ -2.01
HMGB1P41-201ENST00000520234 A0A1B0GVI7 797 aa2.5□□□□□ -2.01
HMGB1P41-201ENST00000520234 BTN3A3O00478 584 aa2.5□□□□□ -2.01
HMGB1P41-201ENST00000520234 GPR171O14626 319 aa2.5□□□□□ -2.01
HMGB1P41-201ENST00000520234 PHOX2AO14813 284 aa2.5□□□□□ -2.01
HMGB1P41-201ENST00000520234 LRRTM2O43300 516 aa2.5□□□□□ -2.01
HMGB1P41-201ENST00000520234 PPIHO43447 177 aaKnown RBP2.5□□□□□ -2.01
HMGB1P41-201ENST00000520234 EIF4E2O60573 245 aaKnown RBP2.5□□□□□ -2.01
HMGB1P41-201ENST00000520234 TPST2O60704 377 aa2.5□□□□□ -2.01
HMGB1P41-201ENST00000520234 CLDN11O75508 207 aa2.5□□□□□ -2.01
HMGB1P41-201ENST00000520234 POP7O75817 140 aaKnown RBP2.5□□□□□ -2.01
HMGB1P41-201ENST00000520234 RBBP9O75884 186 aa2.5□□□□□ -2.01
HMGB1P41-201ENST00000520234 B3GAT3O94766 335 aa2.5□□□□□ -2.01
HMGB1P41-201ENST00000520234 OR2A4O95047 310 aa2.5□□□□□ -2.01
HMGB1P41-201ENST00000520234 SCELO95171 688 aa2.5□□□□□ -2.01
HMGB1P41-201ENST00000520234 PTBP3O95758 552 aaKnown RBP2.5□□□□□ -2.01
HMGB1P41-201ENST00000520234 IGHV2-5P01817 119 aa2.5□□□□□ -2.01
HMGB1P41-201ENST00000520234 CSF2P04141 144 aa2.5□□□□□ -2.01
HMGB1P41-201ENST00000520234 S100A8P05109 93 aa2.5□□□□□ -2.01
HMGB1P41-201ENST00000520234 IL6P05231 212 aa2.5□□□□□ -2.01
HMGB1P41-201ENST00000520234 KLK3P07288 261 aaPredicted RBP2.5□□□□□ -2.01
HMGB1P41-201ENST00000520234 OR56A5P0C7T3 313 aa2.5□□□□□ -2.01
HMGB1P41-201ENST00000520234 COX5BP10606 129 aa2.5□□□□□ -2.01
HMGB1P41-201ENST00000520234 PIPP12273 146 aaPredicted RBP2.5□□□□□ -2.01
HMGB1P41-201ENST00000520234 CYBAP13498 195 aa2.5□□□□□ -2.01
HMGB1P41-201ENST00000520234 ATP5A1P25705 553 aaKnown RBP2.5□□□□□ -2.01
HMGB1P41-201ENST00000520234 UCP1P25874 307 aa2.5□□□□□ -2.01
HMGB1P41-201ENST00000520234 GGT2P36268 569 aa2.5□□□□□ -2.01
HMGB1P41-201ENST00000520234 CD86P42081 329 aa2.5□□□□□ -2.01
HMGB1P41-201ENST00000520234 CSNK1DP48730 415 aa2.5□□□□□ -2.01
HMGB1P41-201ENST00000520234 PITPNBP48739 271 aa2.5□□□□□ -2.01
HMGB1P41-201ENST00000520234 TGM4P49221 684 aa2.5□□□□□ -2.01
HMGB1P41-201ENST00000520234 CCT3P49368 545 aaKnown RBP2.5□□□□□ -2.01
HMGB1P41-201ENST00000520234 TTPAP49638 278 aa2.5□□□□□ -2.01
HMGB1P41-201ENST00000520234 EVX1P49640 407 aa2.5□□□□□ -2.01
HMGB1P41-201ENST00000520234 STARP49675 285 aa2.5□□□□□ -2.01
HMGB1P41-201ENST00000520234 POLR2JP52435 117 aaKnown RBP2.5□□□□□ -2.01
HMGB1P41-201ENST00000520234 ZNF140P52738 457 aaPredicted RBP2.5□□□□□ -2.01
HMGB1P41-201ENST00000520234 DIO3P55073 304 aa2.5□□□□□ -2.01
HMGB1P41-201ENST00000520234 CDH4P55283 916 aa2.5□□□□□ -2.01
HMGB1P41-201ENST00000520234 BPIFB3P59826 476 aa2.5□□□□□ -2.01
HMGB1P41-201ENST00000520234 SPCS3P61009 180 aa2.5□□□□□ -2.01
HMGB1P41-201ENST00000520234 ERVK-8P63133 956 aa2.5□□□□□ -2.01
HMGB1P41-201ENST00000520234 CHRNB3Q05901 458 aa2.5□□□□□ -2.01
HMGB1P41-201ENST00000520234 ECH1Q13011 328 aa2.5□□□□□ -2.01
HMGB1P41-201ENST00000520234 PLD1Q13393 1074 aa2.5□□□□□ -2.01
HMGB1P41-201ENST00000520234 OR4D1Q15615 310 aa2.5□□□□□ -2.01
HMGB1P41-201ENST00000520234 SPIN4Q56A73 249 aa2.5□□□□□ -2.01
HMGB1P41-201ENST00000520234 TMEM255AQ5JRV8 349 aa2.5□□□□□ -2.01
HMGB1P41-201ENST00000520234 DNLZQ5SXM8 178 aa2.5□□□□□ -2.01
HMGB1P41-201ENST00000520234 SLC25A25Q6KCM7 469 aa2.5□□□□□ -2.01
HMGB1P41-201ENST00000520234 CD200R1LQ6Q8B3 271 aa2.5□□□□□ -2.01
HMGB1P41-201ENST00000520234 CASP12Q6UXS9 341 aa2.5□□□□□ -2.01
HMGB1P41-201ENST00000520234 APOOLQ6UXV4 268 aa2.5□□□□□ -2.01
HMGB1P41-201ENST00000520234 HSDL2Q6YN16 418 aa2.5□□□□□ -2.01
HMGB1P41-201ENST00000520234 CERS6Q6ZMG9 384 aa2.5□□□□□ -2.01
HMGB1P41-201ENST00000520234 TMEM91Q6ZNR0 172 aa2.5□□□□□ -2.01
HMGB1P41-201ENST00000520234 LUZP2Q86TE4 346 aa2.5□□□□□ -2.01
HMGB1P41-201ENST00000520234 SLC22A18ASQ8N1D0 253 aa2.5□□□□□ -2.01
HMGB1P41-201ENST00000520234 C10orf111Q8N326 155 aa2.5□□□□□ -2.01
HMGB1P41-201ENST00000520234 SREK1IP1Q8N9Q2 155 aaPredicted RBP2.5□□□□□ -2.01
HMGB1P41-201ENST00000520234 RELL2Q8NC24 303 aaPredicted RBP2.5□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 146 ms