RNA–Protein interactions for RNA: ENST00000520062.1

HMGB1P46-201, Transcript of high mobility group box 1 pseudogene 46, humanhuman

BASIC

Gene HMGB1P46, Length 610 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P46-201ENST00000520062 BAALCQ8WXS3 180 aa3.42□□□□□ -1.86
HMGB1P46-201ENST00000520062 OR8D1Q8WZ84 308 aa3.42□□□□□ -1.86
HMGB1P46-201ENST00000520062 HAUS1Q96CS2 278 aa3.42□□□□□ -1.86
HMGB1P46-201ENST00000520062 DYNLL2Q96FJ2 89 aa3.42□□□□□ -1.86
HMGB1P46-201ENST00000520062 MSANTD3Q96H12 275 aa3.42□□□□□ -1.86
HMGB1P46-201ENST00000520062 TEAD3Q99594 435 aa3.42□□□□□ -1.86
HMGB1P46-201ENST00000520062 SLIRPQ9GZT3 109 aaKnown RBP3.42□□□□□ -1.86
HMGB1P46-201ENST00000520062 TOLLIPQ9H0E2 274 aa3.42□□□□□ -1.86
HMGB1P46-201ENST00000520062 REEP1Q9H902 201 aa3.42□□□□□ -1.86
HMGB1P46-201ENST00000520062 ZMAT5Q9UDW3 170 aaKnown RBP3.42□□□□□ -1.86
HMGB1P46-201ENST00000520062 TBX21Q9UL17 535 aa3.42□□□□□ -1.86
HMGB1P46-201ENST00000520062 STK38LQ9Y2H1 464 aa3.42□□□□□ -1.86
HMGB1P46-201ENST00000520062 HYOU1Q9Y4L1 999 aa3.42□□□□□ -1.86
HMGB1P46-201ENST00000520062 SCN2AQ99250 2005 aa3.42□□□□□ -1.86
HMGB1P46-201ENST00000520062 PCDH11XQ9BZA7 1347 aa3.42□□□□□ -1.86
HMGB1P46-201ENST00000520062 IGLV4-69A0A075B6H9 119 aa3.41□□□□□ -1.86
HMGB1P46-201ENST00000520062 ANKRD63C9JTQ0 380 aa3.41□□□□□ -1.86
HMGB1P46-201ENST00000520062 GMDSO60547 372 aa3.41□□□□□ -1.86
HMGB1P46-201ENST00000520062 NMT2O60551 498 aa3.41□□□□□ -1.86
HMGB1P46-201ENST00000520062 RAD1O60671 282 aa3.41□□□□□ -1.86
HMGB1P46-201ENST00000520062 PLEKHA8P1O95397 391 aa3.41□□□□□ -1.86
HMGB1P46-201ENST00000520062 TCP1P17987 556 aaKnown RBP3.41□□□□□ -1.86
HMGB1P46-201ENST00000520062 MYCNOSP40205 109 aa3.41□□□□□ -1.86
HMGB1P46-201ENST00000520062 CDKN2DP55273 166 aa3.41□□□□□ -1.86
HMGB1P46-201ENST00000520062 MECOMQ03112 1051 aa3.41□□□□□ -1.86
HMGB1P46-201ENST00000520062 MADCAM1Q13477 382 aa3.41□□□□□ -1.86
HMGB1P46-201ENST00000520062 VAMP3Q15836 100 aa3.41□□□□□ -1.86
HMGB1P46-201ENST00000520062 UBAC2Q8NBM4 344 aa3.41□□□□□ -1.86
HMGB1P46-201ENST00000520062 C15orf40Q8WUR7 153 aa3.41□□□□□ -1.86
HMGB1P46-201ENST00000520062 TFGQ92734 400 aaPredicted RBP3.41□□□□□ -1.86
HMGB1P46-201ENST00000520062 PTX4Q96A99 478 aa3.41□□□□□ -1.86
HMGB1P46-201ENST00000520062 TMEM27Q9HBJ8 222 aa3.41□□□□□ -1.86
HMGB1P46-201ENST00000520062 TREX1Q9NSU2 369 aa3.41□□□□□ -1.86
HMGB1P46-201ENST00000520062 DDX19AQ9NUU7 478 aaKnown RBP3.41□□□□□ -1.86
HMGB1P46-201ENST00000520062 ZNF257Q9Y2Q1 563 aa3.41□□□□□ -1.86
HMGB1P46-201ENST00000520062 OR51B2Q9Y5P1 312 aa3.41□□□□□ -1.86
HMGB1P46-201ENST00000520062 ADAMTS13Q76LX8 1427 aa3.41□□□□□ -1.86
HMGB1P46-201ENST00000520062 A0A0B4J2E0 115 aa3.4□□□□□ -1.87
HMGB1P46-201ENST00000520062 IGHV1-69DA0A0B4J2H0 117 aa3.4□□□□□ -1.87
HMGB1P46-201ENST00000520062 PSMD11O00231 422 aa3.4□□□□□ -1.87
HMGB1P46-201ENST00000520062 CTNSO60931 367 aa3.4□□□□□ -1.87
HMGB1P46-201ENST00000520062 SPAG7O75391 227 aa3.4□□□□□ -1.87
HMGB1P46-201ENST00000520062 RPL18AQ02543 176 aaKnown RBP3.4□□□□□ -1.87
HMGB1P46-201ENST00000520062 KRT71Q3SY84 523 aa3.4□□□□□ -1.87
HMGB1P46-201ENST00000520062 LCE1EQ5T753 118 aa3.4□□□□□ -1.87
HMGB1P46-201ENST00000520062 LIN9Q5TKA1 542 aa3.4□□□□□ -1.87
HMGB1P46-201ENST00000520062 IGFL2Q6UWQ7 119 aa3.4□□□□□ -1.87
HMGB1P46-201ENST00000520062 TMPRSS11AQ6ZMR5 421 aa3.4□□□□□ -1.87
HMGB1P46-201ENST00000520062 NDUFAF7Q7L592 441 aa3.4□□□□□ -1.87
HMGB1P46-201ENST00000520062 NKAIN4Q8IVV8 208 aa3.4□□□□□ -1.87
HMGB1P46-201ENST00000520062 SPERTQ8NA61 448 aa3.4□□□□□ -1.87
HMGB1P46-201ENST00000520062 HSD17B10Q99714 261 aaKnown RBP3.4□□□□□ -1.87
HMGB1P46-201ENST00000520062 RRAGDQ9NQL2 400 aaPredicted RBP3.4□□□□□ -1.87
HMGB1P46-201ENST00000520062 CES1P1Q9UKY3 287 aa3.4□□□□□ -1.87
HMGB1P46-201ENST00000520062 MTCL1Q9Y4B5 1905 aaKnown RBP3.4□□□□□ -1.87
HMGB1P46-201ENST00000520062 CROCCQ5TZA2 2017 aa3.39□□□□□ -1.87
HMGB1P46-201ENST00000520062 IGKV1-8A0A0C4DH67 115 aa3.39□□□□□ -1.87
HMGB1P46-201ENST00000520062 A0A0U1RQV1 116 aa3.39□□□□□ -1.87
HMGB1P46-201ENST00000520062 ZNF879B4DU55 563 aa3.39□□□□□ -1.87
HMGB1P46-201ENST00000520062 E7EWF7 191 aa3.39□□□□□ -1.87
HMGB1P46-201ENST00000520062 YIF1AO95070 293 aa3.39□□□□□ -1.87
HMGB1P46-201ENST00000520062 ZNF823P16415 610 aa3.39□□□□□ -1.87
HMGB1P46-201ENST00000520062 PGAM1P18669 254 aa3.39□□□□□ -1.87
HMGB1P46-201ENST00000520062 ESRRGP62508 458 aa3.39□□□□□ -1.87
HMGB1P46-201ENST00000520062 SLC35B1P78383 322 aa3.39□□□□□ -1.87
HMGB1P46-201ENST00000520062 XIAPP98170 497 aa3.39□□□□□ -1.87
HMGB1P46-201ENST00000520062 ATP6V1FQ16864 119 aa3.39□□□□□ -1.87
HMGB1P46-201ENST00000520062 DEFB116Q30KQ4 102 aa3.39□□□□□ -1.87
HMGB1P46-201ENST00000520062 SNX20Q7Z614 316 aa3.39□□□□□ -1.87
HMGB1P46-201ENST00000520062 RAB43Q86YS6 212 aa3.39□□□□□ -1.87
HMGB1P46-201ENST00000520062 PGAM4Q8N0Y7 254 aa3.39□□□□□ -1.87
HMGB1P46-201ENST00000520062 DAW1Q8N136 415 aa3.39□□□□□ -1.87
HMGB1P46-201ENST00000520062 TRIML2Q8N7C3 387 aa3.39□□□□□ -1.87
HMGB1P46-201ENST00000520062 LINC00469Q8N7U9 141 aa3.39□□□□□ -1.87
HMGB1P46-201ENST00000520062 Q8N9L7 120 aa3.39□□□□□ -1.87
HMGB1P46-201ENST00000520062 WDR31Q8NA23 367 aa3.39□□□□□ -1.87
HMGB1P46-201ENST00000520062 C19orf18Q8NEA5 215 aa3.39□□□□□ -1.87
HMGB1P46-201ENST00000520062 OR10Z1Q8NGY1 313 aa3.39□□□□□ -1.87
HMGB1P46-201ENST00000520062 OR5W2Q8NH69 310 aa3.39□□□□□ -1.87
HMGB1P46-201ENST00000520062 CHID1Q9BWS9 393 aa3.39□□□□□ -1.87
HMGB1P46-201ENST00000520062 SAMD10Q9BYL1 202 aa3.39□□□□□ -1.87
HMGB1P46-201ENST00000520062 GGA2Q9UJY4 613 aa3.39□□□□□ -1.87
HMGB1P46-201ENST00000520062 IGHV1OR15-9A0A0B4J2B8 117 aa3.38□□□□□ -1.87
HMGB1P46-201ENST00000520062 A0A1W2PP18 115 aa3.38□□□□□ -1.87
HMGB1P46-201ENST00000520062 GOLGA8JA6NMD2 632 aa3.38□□□□□ -1.87
HMGB1P46-201ENST00000520062 TAAR5O14804 337 aa3.38□□□□□ -1.87
HMGB1P46-201ENST00000520062 NEMFO60524 1076 aa3.38□□□□□ -1.87
HMGB1P46-201ENST00000520062 GCM2O75603 506 aaPredicted RBP3.38□□□□□ -1.87
HMGB1P46-201ENST00000520062 SLC22A5O76082 557 aa3.38□□□□□ -1.87
HMGB1P46-201ENST00000520062 VAPBO95292 243 aa3.38□□□□□ -1.87
HMGB1P46-201ENST00000520062 GCGP01275 180 aa3.38□□□□□ -1.87
HMGB1P46-201ENST00000520062 GOLGA8HP0CJ92 632 aa3.38□□□□□ -1.87
HMGB1P46-201ENST00000520062 ARL2P36404 184 aa3.38□□□□□ -1.87
HMGB1P46-201ENST00000520062 TALDO1P37837 337 aa3.38□□□□□ -1.87
HMGB1P46-201ENST00000520062 UBE2E1P51965 193 aa3.38□□□□□ -1.87
HMGB1P46-201ENST00000520062 HADHBP55084 474 aaKnown RBP3.38□□□□□ -1.87
HMGB1P46-201ENST00000520062 GFERP55789 205 aa3.38□□□□□ -1.87
HMGB1P46-201ENST00000520062 TAS2R60P59551 318 aa3.38□□□□□ -1.87
HMGB1P46-201ENST00000520062 KRTAP10-3P60369 221 aa3.38□□□□□ -1.87
HMGB1P46-201ENST00000520062 LOXL1Q08397 574 aaPredicted RBP3.38□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms