RNA–Protein interactions for RNA: ENST00000519848.1

PABPC1-213, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 2

Gene PABPC1, Length 676 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-213ENST00000519848 F5H5K5 113 aa7.17□□□□□ -1.26
PABPC1-213ENST00000519848 SPRY1O43609 319 aaPredicted RBP7.17□□□□□ -1.26
PABPC1-213ENST00000519848 AHCYL1O43865 530 aa7.17□□□□□ -1.26
PABPC1-213ENST00000519848 CCDC22O60826 627 aa7.17□□□□□ -1.26
PABPC1-213ENST00000519848 FOXH1O75593 365 aa7.17□□□□□ -1.26
PABPC1-213ENST00000519848 GADD45GO95257 159 aa7.17□□□□□ -1.26
PABPC1-213ENST00000519848 HKR1P10072 659 aa7.17□□□□□ -1.26
PABPC1-213ENST00000519848 NR2C1P13056 603 aa7.17□□□□□ -1.26
PABPC1-213ENST00000519848 HSD17B1P14061 328 aa7.17□□□□□ -1.26
PABPC1-213ENST00000519848 RPS2P15880 293 aaKnown RBP7.17□□□□□ -1.26
PABPC1-213ENST00000519848 PCMT1P22061 227 aa7.17□□□□□ -1.26
PABPC1-213ENST00000519848 PRDX6P30041 224 aa7.17□□□□□ -1.26
PABPC1-213ENST00000519848 PSMB10P40306 273 aa7.17□□□□□ -1.26
PABPC1-213ENST00000519848 MDH2P40926 338 aaKnown RBP7.17□□□□□ -1.26
PABPC1-213ENST00000519848 MAGEA2P43356 314 aa7.17□□□□□ -1.26
PABPC1-213ENST00000519848 CENPAP49450 140 aa7.17□□□□□ -1.26
PABPC1-213ENST00000519848 ARHGDIAP52565 204 aa7.17□□□□□ -1.26
PABPC1-213ENST00000519848 MS4A2Q01362 244 aa7.17□□□□□ -1.26
PABPC1-213ENST00000519848 CRMP1Q14194 572 aa7.17□□□□□ -1.26
PABPC1-213ENST00000519848 DEFB112Q30KQ8 113 aa7.17□□□□□ -1.26
PABPC1-213ENST00000519848 ARMCX4Q5H9R4 360 aa7.17□□□□□ -1.26
PABPC1-213ENST00000519848 CYP2R1Q6VVX0 501 aa7.17□□□□□ -1.26
PABPC1-213ENST00000519848 PRSS45Q7RTY3 260 aa7.17□□□□□ -1.26
PABPC1-213ENST00000519848 TMEM179BQ7Z7N9 219 aa7.17□□□□□ -1.26
PABPC1-213ENST00000519848 C11orf53Q8IXP5 236 aa7.17□□□□□ -1.26
PABPC1-213ENST00000519848 PGAM4Q8N0Y7 254 aa7.17□□□□□ -1.26
PABPC1-213ENST00000519848 BPIFB2Q8N4F0 458 aa7.17□□□□□ -1.26
PABPC1-213ENST00000519848 FITM2Q8N6M3 262 aa7.17□□□□□ -1.26
PABPC1-213ENST00000519848 IQCF1Q8N6M8 205 aa7.17□□□□□ -1.26
PABPC1-213ENST00000519848 ATG16L2Q8NAA4 619 aa7.17□□□□□ -1.26
PABPC1-213ENST00000519848 SLC37A3Q8NCC5 494 aa7.17□□□□□ -1.26
PABPC1-213ENST00000519848 ST7LQ8TDW4 575 aa7.17□□□□□ -1.26
PABPC1-213ENST00000519848 GCDHQ92947 438 aaPredicted RBP7.17□□□□□ -1.26
PABPC1-213ENST00000519848 PTP4A1Q93096 173 aa7.17□□□□□ -1.26
PABPC1-213ENST00000519848 POP5Q969H6 163 aaKnown RBP7.17□□□□□ -1.26
PABPC1-213ENST00000519848 SLCO4A1Q96BD0 722 aa7.17□□□□□ -1.26
PABPC1-213ENST00000519848 UPRTQ96BW1 309 aa7.17□□□□□ -1.26
PABPC1-213ENST00000519848 PYURFQ96I23 114 aa7.17□□□□□ -1.26
PABPC1-213ENST00000519848 DIRC2Q96SL1 478 aa7.17□□□□□ -1.26
PABPC1-213ENST00000519848 ATF6BQ99941 703 aa7.17□□□□□ -1.26
PABPC1-213ENST00000519848 SSBP3Q9BWW4 388 aaPredicted RBP7.17□□□□□ -1.26
PABPC1-213ENST00000519848 NMNAT2Q9BZQ4 307 aa7.17□□□□□ -1.26
PABPC1-213ENST00000519848 EGLN1Q9GZT9 426 aa7.17□□□□□ -1.26
PABPC1-213ENST00000519848 SEMA6AQ9H2E6 1030 aa7.17□□□□□ -1.26
PABPC1-213ENST00000519848 RASSF4Q9H2L5 321 aa7.17□□□□□ -1.26
PABPC1-213ENST00000519848 GORASP2Q9H8Y8 452 aa7.17□□□□□ -1.26
PABPC1-213ENST00000519848 MED20Q9H944 212 aa7.17□□□□□ -1.26
PABPC1-213ENST00000519848 EFCAB1Q9HAE3 211 aa7.17□□□□□ -1.26
PABPC1-213ENST00000519848 DDX28Q9NUL7 540 aaKnown RBP7.17□□□□□ -1.26
PABPC1-213ENST00000519848 ARMC1Q9NVT9 282 aa7.17□□□□□ -1.26
PABPC1-213ENST00000519848 NUP50Q9UKX7 468 aa7.17□□□□□ -1.26
PABPC1-213ENST00000519848 POLR1DQ9Y2S0 133 aa7.17□□□□□ -1.26
PABPC1-213ENST00000519848 DOCK11Q5JSL3 2073 aa7.16□□□□□ -1.26
PABPC1-213ENST00000519848 IGHV3OR15-7A0A075B7D8 119 aa7.16□□□□□ -1.26
PABPC1-213ENST00000519848 TRIM77I1YAP6 450 aa7.16□□□□□ -1.26
PABPC1-213ENST00000519848 PTBP3O95758 552 aaKnown RBP7.16□□□□□ -1.26
PABPC1-213ENST00000519848 GASTP01350 101 aa7.16□□□□□ -1.26
PABPC1-213ENST00000519848 CA6P23280 308 aa7.16□□□□□ -1.26
PABPC1-213ENST00000519848 PRTN3P24158 256 aa7.16□□□□□ -1.26
PABPC1-213ENST00000519848 CD200P41217 278 aa7.16□□□□□ -1.26
PABPC1-213ENST00000519848 FGF12P61328 243 aa7.16□□□□□ -1.26
PABPC1-213ENST00000519848 CSNK2BP67870 215 aa7.16□□□□□ -1.26
PABPC1-213ENST00000519848 ZMAT1Q5H9K5 638 aa7.16□□□□□ -1.26
PABPC1-213ENST00000519848 WDR25Q64LD2 544 aaPredicted RBP7.16□□□□□ -1.26
PABPC1-213ENST00000519848 SFRP4Q6FHJ7 346 aaPredicted RBP7.16□□□□□ -1.26
PABPC1-213ENST00000519848 C9orf139Q6ZV77 190 aa7.16□□□□□ -1.26
PABPC1-213ENST00000519848 SPATC1Q76KD6 591 aa7.16□□□□□ -1.26
PABPC1-213ENST00000519848 FAM90A1Q86YD7 464 aa7.16□□□□□ -1.26
PABPC1-213ENST00000519848 ZDHHC21Q8IVQ6 265 aa7.16□□□□□ -1.26
PABPC1-213ENST00000519848 GCSAMQ8N6F7 178 aa7.16□□□□□ -1.26
PABPC1-213ENST00000519848 OR56B2PQ8NGI1 322 aa7.16□□□□□ -1.26
PABPC1-213ENST00000519848 APOBEC3DQ96AK3 386 aaPredicted RBP7.16□□□□□ -1.26
PABPC1-213ENST00000519848 CLPTM1LQ96KA5 538 aa7.16□□□□□ -1.26
PABPC1-213ENST00000519848 CDRT15Q96T59 188 aa7.16□□□□□ -1.26
PABPC1-213ENST00000519848 IFT27Q9BW83 186 aa7.16□□□□□ -1.26
PABPC1-213ENST00000519848 RBM4Q9BWF3 364 aaKnown RBP7.16□□□□□ -1.26
PABPC1-213ENST00000519848 SUCNR1Q9BXA5 334 aa7.16□□□□□ -1.26
PABPC1-213ENST00000519848 MARCH7Q9H992 704 aa7.16□□□□□ -1.26
PABPC1-213ENST00000519848 IL1RAPQ9NPH3 570 aa7.16□□□□□ -1.26
PABPC1-213ENST00000519848 CDH10Q9Y6N8 788 aa7.16□□□□□ -1.26
PABPC1-213ENST00000519848 FAM183AA6NL82 134 aa7.15□□□□□ -1.26
PABPC1-213ENST00000519848 CD300LBA8K4G0 201 aa7.15□□□□□ -1.26
PABPC1-213ENST00000519848 M0R135 149 aa7.15□□□□□ -1.26
PABPC1-213ENST00000519848 HOXA3O43365 443 aaPredicted RBP7.15□□□□□ -1.26
PABPC1-213ENST00000519848 OR10H3O60404 316 aa7.15□□□□□ -1.26
PABPC1-213ENST00000519848 FABP3P05413 133 aa7.15□□□□□ -1.26
PABPC1-213ENST00000519848 RNASE1P07998 156 aaKnown RBP7.15□□□□□ -1.26
PABPC1-213ENST00000519848 T-ENOLP0DO92 83 aa7.15□□□□□ -1.26
PABPC1-213ENST00000519848 ANPEPP15144 967 aa7.15□□□□□ -1.26
PABPC1-213ENST00000519848 GATA3P23771 443 aa7.15□□□□□ -1.26
PABPC1-213ENST00000519848 SLC6A6P31641 620 aa7.15□□□□□ -1.26
PABPC1-213ENST00000519848 CFHR2P36980 270 aa7.15□□□□□ -1.26
PABPC1-213ENST00000519848 LIPAP38571 399 aa7.15□□□□□ -1.26
PABPC1-213ENST00000519848 PITPNBP48739 271 aa7.15□□□□□ -1.26
PABPC1-213ENST00000519848 RPS6KA3P51812 740 aa7.15□□□□□ -1.26
PABPC1-213ENST00000519848 PRKXP51817 358 aa7.15□□□□□ -1.26
PABPC1-213ENST00000519848 SLC3A1Q07837 685 aa7.15□□□□□ -1.26
PABPC1-213ENST00000519848 TSPAN31Q12999 210 aa7.15□□□□□ -1.26
PABPC1-213ENST00000519848 MOGQ16653 247 aa7.15□□□□□ -1.26
PABPC1-213ENST00000519848 PCK2Q16822 640 aa7.15□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms