RNA–Protein interactions for RNA: ENST00000519617.1

CCNC-208, Transcript of cyclin C, humanhuman

TSL 3

Gene CCNC, Length 246 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNC-208ENST00000519617 CCL21O00585 134 aa1.6□□□□□ -2.15
CCNC-208ENST00000519617 KPNA4O00629 521 aaPredicted RBP1.6□□□□□ -2.15
CCNC-208ENST00000519617 PLPP3O14495 311 aa1.6□□□□□ -2.15
CCNC-208ENST00000519617 TNFSF11O14788 317 aa1.6□□□□□ -2.15
CCNC-208ENST00000519617 ARPC3O15145 178 aa1.6□□□□□ -2.15
CCNC-208ENST00000519617 CXCL13O43927 109 aa1.6□□□□□ -2.15
CCNC-208ENST00000519617 CYTIPO60759 359 aa1.6□□□□□ -2.15
CCNC-208ENST00000519617 SS18L1O75177 396 aaPredicted RBP1.6□□□□□ -2.15
CCNC-208ENST00000519617 NPIPB7O75200 414 aa1.6□□□□□ -2.15
CCNC-208ENST00000519617 SRSF10O75494 262 aaKnown RBP1.6□□□□□ -2.15
CCNC-208ENST00000519617 KHDRBS3O75525 346 aaKnown RBP1.6□□□□□ -2.15
CCNC-208ENST00000519617 SORBS2O94875 1100 aaKnown RBP1.6□□□□□ -2.15
CCNC-208ENST00000519617 AKR7A3O95154 331 aa1.6□□□□□ -2.15
CCNC-208ENST00000519617 UBL3O95164 117 aa1.6□□□□□ -2.15
CCNC-208ENST00000519617 TNFAIP8O95379 198 aa1.6□□□□□ -2.15
CCNC-208ENST00000519617 RAB36O95755 333 aa1.6□□□□□ -2.15
CCNC-208ENST00000519617 TXNDC12O95881 172 aa1.6□□□□□ -2.15
CCNC-208ENST00000519617 F10P00742 488 aa1.6□□□□□ -2.15
CCNC-208ENST00000519617 IGKV1D-16P01601 117 aa1.6□□□□□ -2.15
CCNC-208ENST00000519617 IGHMP01871 453 aa1.6□□□□□ -2.15
CCNC-208ENST00000519617 SEMG1P04279 462 aa1.6□□□□□ -2.15
CCNC-208ENST00000519617 STSP08842 583 aa1.6□□□□□ -2.15
CCNC-208ENST00000519617 ASAH2BP0C7U1 165 aa1.6□□□□□ -2.15
CCNC-208ENST00000519617 NPIPA8P0DM63 369 aa1.6□□□□□ -2.15
CCNC-208ENST00000519617 OR8G3PP0DMU2 310 aa1.6□□□□□ -2.15
CCNC-208ENST00000519617 POU2F1P14859 743 aa1.6□□□□□ -2.15
CCNC-208ENST00000519617 MYOD1P15172 320 aa1.6□□□□□ -2.15
CCNC-208ENST00000519617 ZNF708P17019 499 aa1.6□□□□□ -2.15
CCNC-208ENST00000519617 CCNA2P20248 432 aa1.6□□□□□ -2.15
CCNC-208ENST00000519617 IL11P20809 199 aa1.6□□□□□ -2.15
CCNC-208ENST00000519617 CFL1P23528 166 aaKnown RBP1.6□□□□□ -2.15
CCNC-208ENST00000519617 IL32P24001 234 aa1.6□□□□□ -2.15
CCNC-208ENST00000519617 HTR2AP28223 471 aa1.6□□□□□ -2.15
CCNC-208ENST00000519617 FMO3P31513 532 aa1.6□□□□□ -2.15
CCNC-208ENST00000519617 ARR3P36575 388 aa1.6□□□□□ -2.15
CCNC-208ENST00000519617 ACVR1BP36896 505 aa1.6□□□□□ -2.15
CCNC-208ENST00000519617 SERPINF1P36955 418 aa1.6□□□□□ -2.15
CCNC-208ENST00000519617 PTGDSP41222 190 aa1.6□□□□□ -2.15
CCNC-208ENST00000519617 YAP1P46937 504 aaKnown RBP1.6□□□□□ -2.15
CCNC-208ENST00000519617 OMPP47874 163 aa1.6□□□□□ -2.15
CCNC-208ENST00000519617 GSSP48637 474 aa1.6□□□□□ -2.15
CCNC-208ENST00000519617 CSNK1A1P48729 337 aa1.6□□□□□ -2.15
CCNC-208ENST00000519617 RGS6P49758 472 aa1.6□□□□□ -2.15
CCNC-208ENST00000519617 LHX2P50458 406 aa1.6□□□□□ -2.15
CCNC-208ENST00000519617 ZNF136P52737 540 aa1.6□□□□□ -2.15
CCNC-208ENST00000519617 CAPZA1P52907 286 aa1.6□□□□□ -2.15
CCNC-208ENST00000519617 SLC25A1P53007 311 aa1.6□□□□□ -2.15
CCNC-208ENST00000519617 CRISP1P54107 249 aa1.6□□□□□ -2.15
CCNC-208ENST00000519617 NR1H2P55055 460 aa1.6□□□□□ -2.15
CCNC-208ENST00000519617 BIDP55957 195 aa1.6□□□□□ -2.15
CCNC-208ENST00000519617 TAS2R43P59537 309 aa1.6□□□□□ -2.15
CCNC-208ENST00000519617 CXCR4P61073 352 aa1.6□□□□□ -2.15
CCNC-208ENST00000519617 UBE2NP61088 152 aaKnown RBP1.6□□□□□ -2.15
CCNC-208ENST00000519617 RPL27P61353 136 aaKnown RBP1.6□□□□□ -2.15
CCNC-208ENST00000519617 RPS23P62266 143 aaKnown RBP1.6□□□□□ -2.15
CCNC-208ENST00000519617 ACTA2P62736 377 aa1.6□□□□□ -2.15
CCNC-208ENST00000519617 GRB2P62993 217 aaKnown RBP1.6□□□□□ -2.15
CCNC-208ENST00000519617 ACTG2P63267 376 aa1.6□□□□□ -2.15
CCNC-208ENST00000519617 HOXC5Q00444 222 aa1.6□□□□□ -2.15
CCNC-208ENST00000519617 IL5RAQ01344 420 aa1.6□□□□□ -2.15
CCNC-208ENST00000519617 MS4A2Q01362 244 aa1.6□□□□□ -2.15
CCNC-208ENST00000519617 GALK2Q01415 458 aa1.6□□□□□ -2.15
CCNC-208ENST00000519617 HSF2Q03933 536 aa1.6□□□□□ -2.15
CCNC-208ENST00000519617 KHDRBS1Q07666 443 aaKnown RBP eCLIP1.6□□□□□ -2.15
CCNC-208ENST00000519617 CD47Q08722 323 aa1.6□□□□□ -2.15
CCNC-208ENST00000519617 MZT1Q08AG7 82 aa1.6□□□□□ -2.15
CCNC-208ENST00000519617 SCRN3Q0VDG4 424 aa1.6□□□□□ -2.15
CCNC-208ENST00000519617 FOXO1Q12778 655 aa1.6□□□□□ -2.15
CCNC-208ENST00000519617 RAB40BQ12829 278 aa1.6□□□□□ -2.15
CCNC-208ENST00000519617 AQP6Q13520 282 aa1.6□□□□□ -2.15
CCNC-208ENST00000519617 KRR1Q13601 381 aaKnown RBP1.6□□□□□ -2.15
CCNC-208ENST00000519617 GINS1Q14691 196 aa1.6□□□□□ -2.15
CCNC-208ENST00000519617 TAF13Q15543 124 aa1.6□□□□□ -2.15
CCNC-208ENST00000519617 CD226Q15762 336 aa1.6□□□□□ -2.15
CCNC-208ENST00000519617 TOMM34Q15785 309 aaPredicted RBP1.6□□□□□ -2.15
CCNC-208ENST00000519617 SNAPC1Q16533 368 aa1.6□□□□□ -2.15
CCNC-208ENST00000519617 MAPK14Q16539 360 aa1.6□□□□□ -2.15
CCNC-208ENST00000519617 CTF1Q16619 201 aa1.6□□□□□ -2.15
CCNC-208ENST00000519617 LINC00303Q3SY05 128 aa1.6□□□□□ -2.15
CCNC-208ENST00000519617 NADK2Q4G0N4 442 aa1.6□□□□□ -2.15
CCNC-208ENST00000519617 IQCCQ4KMZ1 466 aa1.6□□□□□ -2.15
CCNC-208ENST00000519617 RBM48Q5RL73 367 aaKnown RBP1.6□□□□□ -2.15
CCNC-208ENST00000519617 SLC25A30Q5SVS4 291 aa1.6□□□□□ -2.15
CCNC-208ENST00000519617 C1orf185Q5T7R7 199 aa1.6□□□□□ -2.15
CCNC-208ENST00000519617 OGFRL1Q5TC84 451 aaPredicted RBP1.6□□□□□ -2.15
CCNC-208ENST00000519617 NXNL2Q5VZ03 156 aa1.6□□□□□ -2.15
CCNC-208ENST00000519617 FBXW9Q5XUX1 488 aa1.6□□□□□ -2.15
CCNC-208ENST00000519617 LPCAT4Q643R3 524 aa1.6□□□□□ -2.15
CCNC-208ENST00000519617 LIN54Q6MZP7 749 aa1.6□□□□□ -2.15
CCNC-208ENST00000519617 FAM53AQ6NSI3 398 aaPredicted RBP1.6□□□□□ -2.15
CCNC-208ENST00000519617 TMEM53Q6P2H8 277 aa1.6□□□□□ -2.15
CCNC-208ENST00000519617 PGBD2Q6P3X8 592 aa1.6□□□□□ -2.15
CCNC-208ENST00000519617 NIPAL3Q6P499 406 aa1.6□□□□□ -2.15
CCNC-208ENST00000519617 FAHD1Q6P587 224 aa1.6□□□□□ -2.15
CCNC-208ENST00000519617 CBLN3Q6UW01 205 aa1.6□□□□□ -2.15
CCNC-208ENST00000519617 ARSKQ6UWY0 536 aa1.6□□□□□ -2.15
CCNC-208ENST00000519617 APOOLQ6UXV4 268 aa1.6□□□□□ -2.15
CCNC-208ENST00000519617 ZNF620Q6ZNG0 422 aa1.6□□□□□ -2.15
CCNC-208ENST00000519617 C16orf47Q6ZP98 133 aaPredicted RBP1.6□□□□□ -2.15
CCNC-208ENST00000519617 Q6ZPB1 254 aaPredicted RBP1.6□□□□□ -2.15
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms