RNA–Protein interactions for RNA: ENST00000517533.5

CTNNA1-202, Transcript of catenin alpha 1, humanhuman

TSL 3

Gene CTNNA1, Length 579 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-202ENST00000517533 OTUB2Q96DC9 234 aa4.36□□□□□ -1.71
CTNNA1-202ENST00000517533 ZNF597Q96LX8 424 aa4.36□□□□□ -1.71
CTNNA1-202ENST00000517533 RNF145Q96MT1 663 aa4.36□□□□□ -1.71
CTNNA1-202ENST00000517533 NXF2Q9GZY0 626 aaKnown RBP4.36□□□□□ -1.71
CTNNA1-202ENST00000517533 OR51V1Q9H2C8 321 aa4.36□□□□□ -1.71
CTNNA1-202ENST00000517533 ABCB10Q9NRK6 738 aa4.36□□□□□ -1.71
CTNNA1-202ENST00000517533 IL37Q9NZH6 218 aa4.36□□□□□ -1.71
CTNNA1-202ENST00000517533 DHRS4-AS1Q9P1J3 65 aa4.36□□□□□ -1.71
CTNNA1-202ENST00000517533 XCL2Q9UBD3 114 aa4.36□□□□□ -1.71
CTNNA1-202ENST00000517533 APOBEC3BQ9UH17 382 aaKnown RBP4.36□□□□□ -1.71
CTNNA1-202ENST00000517533 UGT2A1Q9Y4X1 527 aa4.36□□□□□ -1.71
CTNNA1-202ENST00000517533 WIF1Q9Y5W5 379 aa4.36□□□□□ -1.71
CTNNA1-202ENST00000517533 STYXL1Q9Y6J8 313 aa4.36□□□□□ -1.71
CTNNA1-202ENST00000517533 PHF3Q92576 2039 aaKnown RBP4.36□□□□□ -1.71
CTNNA1-202ENST00000517533 C9J4A7 227 aa4.35□□□□□ -1.71
CTNNA1-202ENST00000517533 FTCDNL1E5RQL4 147 aa4.35□□□□□ -1.71
CTNNA1-202ENST00000517533 H0Y980 276 aa4.35□□□□□ -1.71
CTNNA1-202ENST00000517533 HAT1O14929 419 aa4.35□□□□□ -1.71
CTNNA1-202ENST00000517533 AGPAT2O15120 278 aa4.35□□□□□ -1.71
CTNNA1-202ENST00000517533 CRLF1O75462 422 aa4.35□□□□□ -1.71
CTNNA1-202ENST00000517533 SNAP29O95721 258 aa4.35□□□□□ -1.71
CTNNA1-202ENST00000517533 RAB36O95755 333 aa4.35□□□□□ -1.71
CTNNA1-202ENST00000517533 IFNA5P01569 189 aa4.35□□□□□ -1.71
CTNNA1-202ENST00000517533 RETP07949 1114 aa4.35□□□□□ -1.71
CTNNA1-202ENST00000517533 ZNF35P13682 527 aa4.35□□□□□ -1.71
CTNNA1-202ENST00000517533 NUP107P57740 925 aa4.35□□□□□ -1.71
CTNNA1-202ENST00000517533 ELAVL2Q12926 359 aaKnown RBP4.35□□□□□ -1.71
CTNNA1-202ENST00000517533 LY6DQ14210 128 aa4.35□□□□□ -1.71
CTNNA1-202ENST00000517533 ZSCAN26Q16670 478 aa4.35□□□□□ -1.71
CTNNA1-202ENST00000517533 C1orf100Q5SVJ3 147 aa4.35□□□□□ -1.71
CTNNA1-202ENST00000517533 OR2T5Q6IEZ7 315 aa4.35□□□□□ -1.71
CTNNA1-202ENST00000517533 WDR74Q6RFH5 385 aaPredicted RBP4.35□□□□□ -1.71
CTNNA1-202ENST00000517533 STX12Q86Y82 276 aa4.35□□□□□ -1.71
CTNNA1-202ENST00000517533 BBS7Q8IWZ6 715 aa4.35□□□□□ -1.71
CTNNA1-202ENST00000517533 HS3ST5Q8IZT8 346 aa4.35□□□□□ -1.71
CTNNA1-202ENST00000517533 PNKDQ8N490 385 aa4.35□□□□□ -1.71
CTNNA1-202ENST00000517533 OR10W1Q8NGF6 305 aa4.35□□□□□ -1.71
CTNNA1-202ENST00000517533 OR2T29Q8NH02 315 aa4.35□□□□□ -1.71
CTNNA1-202ENST00000517533 DOK4Q8TEW6 326 aa4.35□□□□□ -1.71
CTNNA1-202ENST00000517533 TMEM230Q96A57 120 aa4.35□□□□□ -1.71
CTNNA1-202ENST00000517533 P2RX4Q99571 388 aa4.35□□□□□ -1.71
CTNNA1-202ENST00000517533 CHCHD5Q9BSY4 110 aa4.35□□□□□ -1.71
CTNNA1-202ENST00000517533 TOLLIPQ9H0E2 274 aa4.35□□□□□ -1.71
CTNNA1-202ENST00000517533 JPT2Q9H910 190 aa4.35□□□□□ -1.71
CTNNA1-202ENST00000517533 HRASLSQ9HDD0 168 aa4.35□□□□□ -1.71
CTNNA1-202ENST00000517533 ZDHHC4Q9NPG8 344 aa4.35□□□□□ -1.71
CTNNA1-202ENST00000517533 CD274Q9NZQ7 290 aa4.35□□□□□ -1.71
CTNNA1-202ENST00000517533 VSIG4Q9Y279 399 aa4.35□□□□□ -1.71
CTNNA1-202ENST00000517533 ASF1AQ9Y294 204 aa4.35□□□□□ -1.71
CTNNA1-202ENST00000517533 KIAA0232Q92628 1395 aa4.35□□□□□ -1.71
CTNNA1-202ENST00000517533 TRAV9-2A0A087WT02 112 aa4.34□□□□□ -1.71
CTNNA1-202ENST00000517533 SLC5A10A0PJK1 596 aa4.34□□□□□ -1.71
CTNNA1-202ENST00000517533 F5H768 121 aa4.34□□□□□ -1.71
CTNNA1-202ENST00000517533 M0R1B8 84 aa4.34□□□□□ -1.71
CTNNA1-202ENST00000517533 SLC31A1O15431 190 aa4.34□□□□□ -1.71
CTNNA1-202ENST00000517533 ATP6V1G2O95670 118 aa4.34□□□□□ -1.71
CTNNA1-202ENST00000517533 IGKV3-20P01619 116 aa4.34□□□□□ -1.71
CTNNA1-202ENST00000517533 THRAP10827 490 aa4.34□□□□□ -1.71
CTNNA1-202ENST00000517533 ATF6P18850 670 aa4.34□□□□□ -1.71
CTNNA1-202ENST00000517533 ZP3P21754 424 aa4.34□□□□□ -1.71
CTNNA1-202ENST00000517533 TUFMP49411 452 aaKnown RBP4.34□□□□□ -1.71
CTNNA1-202ENST00000517533 IRX1P78414 480 aaPredicted RBP4.34□□□□□ -1.71
CTNNA1-202ENST00000517533 CD164Q04900 197 aa4.34□□□□□ -1.71
CTNNA1-202ENST00000517533 SMARCB1Q12824 385 aa4.34□□□□□ -1.71
CTNNA1-202ENST00000517533 AQP6Q13520 282 aa4.34□□□□□ -1.71
CTNNA1-202ENST00000517533 LRRC36Q1X8D7 754 aa4.34□□□□□ -1.71
CTNNA1-202ENST00000517533 CCNJQ5T5M9 372 aa4.34□□□□□ -1.71
CTNNA1-202ENST00000517533 MED27Q6P2C8 311 aa4.34□□□□□ -1.71
CTNNA1-202ENST00000517533 BLIDQ8IZY5 108 aa4.34□□□□□ -1.71
CTNNA1-202ENST00000517533 Q8N402 240 aa4.34□□□□□ -1.71
CTNNA1-202ENST00000517533 CCDC71LQ8N9Z2 235 aa4.34□□□□□ -1.71
CTNNA1-202ENST00000517533 OR8G5Q8NG78 346 aa4.34□□□□□ -1.71
CTNNA1-202ENST00000517533 DUX3Q96PT4 197 aa4.34□□□□□ -1.71
CTNNA1-202ENST00000517533 PDCD1LG2Q9BQ51 273 aa4.34□□□□□ -1.71
CTNNA1-202ENST00000517533 UPF3AQ9H1J1 476 aaKnown RBP4.34□□□□□ -1.71
CTNNA1-202ENST00000517533 OR51B5Q9H339 312 aa4.34□□□□□ -1.71
CTNNA1-202ENST00000517533 DSN1Q9H410 356 aa4.34□□□□□ -1.71
CTNNA1-202ENST00000517533 CLMPQ9H6B4 373 aa4.34□□□□□ -1.71
CTNNA1-202ENST00000517533 DDIT4Q9NX09 232 aa4.34□□□□□ -1.71
CTNNA1-202ENST00000517533 CLCF1Q9UBD9 225 aa4.34□□□□□ -1.71
CTNNA1-202ENST00000517533 KLHL21Q9UJP4 597 aa4.34□□□□□ -1.71
CTNNA1-202ENST00000517533 CFL2Q9Y281 166 aa4.34□□□□□ -1.71
CTNNA1-202ENST00000517533 MYO15BQ96JP2 1530 aa4.33□□□□□ -1.72
CTNNA1-202ENST00000517533 MAPK8IP3Q9UPT6 1336 aa4.33□□□□□ -1.72
CTNNA1-202ENST00000517533 IGHV2OR16-5A0A0B4J2B6 119 aa4.33□□□□□ -1.72
CTNNA1-202ENST00000517533 FAM240AA0A1B0GVK7 77 aa4.33□□□□□ -1.72
CTNNA1-202ENST00000517533 ISPDA4D126 451 aa4.33□□□□□ -1.72
CTNNA1-202ENST00000517533 SMIM23A6NLE4 172 aa4.33□□□□□ -1.72
CTNNA1-202ENST00000517533 A8MXK9 166 aa4.33□□□□□ -1.72
CTNNA1-202ENST00000517533 EPM2AB3EWF7 344 aa4.33□□□□□ -1.72
CTNNA1-202ENST00000517533 TMEM114B3SHH9 223 aa4.33□□□□□ -1.72
CTNNA1-202ENST00000517533 M0QZ92 97 aa4.33□□□□□ -1.72
CTNNA1-202ENST00000517533 SOCS3O14543 225 aa4.33□□□□□ -1.72
CTNNA1-202ENST00000517533 PHF1O43189 567 aaPredicted RBP4.33□□□□□ -1.72
CTNNA1-202ENST00000517533 HPGDSO60760 199 aa4.33□□□□□ -1.72
CTNNA1-202ENST00000517533 C6orf47O95873 294 aa4.33□□□□□ -1.72
CTNNA1-202ENST00000517533 OR5AL1P0C617 328 aa4.33□□□□□ -1.72
CTNNA1-202ENST00000517533 OR5H8P0DN80 308 aa4.33□□□□□ -1.72
CTNNA1-202ENST00000517533 CMA1P23946 247 aa4.33□□□□□ -1.72
CTNNA1-202ENST00000517533 AK4P27144 223 aaPredicted RBP4.33□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 56.2 ms