RNA–Protein interactions for RNA: ENST00000517417.2

PCDHGA1-202, Transcript of protocadherin gamma subfamily A, 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene PCDHGA1, Length 4,604 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA1-202ENST00000517417 MGMTP16455 207 aa9.76□□□□□ -0.85
PCDHGA1-202ENST00000517417 CTRB1P17538 263 aa9.76□□□□□ -0.85
PCDHGA1-202ENST00000517417 BTCP35070 178 aa9.76□□□□□ -0.85
PCDHGA1-202ENST00000517417 RRADP55042 308 aa9.76□□□□□ -0.85
PCDHGA1-202ENST00000517417 PLGLAQ15195 96 aa9.76□□□□□ -0.85
PCDHGA1-202ENST00000517417 CTRB2Q6GPI1 263 aa9.76□□□□□ -0.85
PCDHGA1-202ENST00000517417 TMEM88Q6PEY1 159 aa9.76□□□□□ -0.85
PCDHGA1-202ENST00000517417 ZC3HAV1Q7Z2W4 902 aaKnown RBP9.76□□□□□ -0.85
PCDHGA1-202ENST00000517417 BVESQ8NE79 360 aa9.76□□□□□ -0.85
PCDHGA1-202ENST00000517417 PIGMQ9H3S5 423 aa9.76□□□□□ -0.85
PCDHGA1-202ENST00000517417 GNG12Q9UBI6 72 aa9.76□□□□□ -0.85
PCDHGA1-202ENST00000517417 RAB22AQ9UL26 194 aa9.76□□□□□ -0.85
PCDHGA1-202ENST00000517417 SHISA8B8ZZ34 492 aa9.76□□□□□ -0.85
PCDHGA1-202ENST00000517417 CXCL13O43927 109 aa9.76□□□□□ -0.85
PCDHGA1-202ENST00000517417 STK17BO94768 372 aa9.76□□□□□ -0.85
PCDHGA1-202ENST00000517417 S100PP25815 95 aa9.76□□□□□ -0.85
PCDHGA1-202ENST00000517417 MESP2Q0VG99 397 aa9.76□□□□□ -0.85
PCDHGA1-202ENST00000517417 LANCL3Q6ZV70 420 aa9.76□□□□□ -0.85
PCDHGA1-202ENST00000517417 NKX3-1Q99801 234 aaPredicted RBP9.76□□□□□ -0.85
PCDHGA1-202ENST00000517417 NUDT9Q9BW91 350 aa9.76□□□□□ -0.85
PCDHGA1-202ENST00000517417 DEFB127Q9H1M4 99 aa9.76□□□□□ -0.85
PCDHGA1-202ENST00000517417 GCM1Q9NP62 436 aa9.76□□□□□ -0.85
PCDHGA1-202ENST00000517417 CES1P1Q9UKY3 287 aa9.76□□□□□ -0.85
PCDHGA1-202ENST00000517417 SCN3AQ9NY46 2000 aa9.76□□□□□ -0.85
PCDHGA1-202ENST00000517417 IGKV1-8A0A0C4DH67 115 aa9.76□□□□□ -0.85
PCDHGA1-202ENST00000517417 A0A1B0GTH9 108 aa9.76□□□□□ -0.85
PCDHGA1-202ENST00000517417 PRSS37A4D1T9 235 aa9.76□□□□□ -0.85
PCDHGA1-202ENST00000517417 OR6C68A6NDL8 312 aa9.76□□□□□ -0.85
PCDHGA1-202ENST00000517417 K7EPK0 472 aa9.76□□□□□ -0.85
PCDHGA1-202ENST00000517417 TIMM8AO60220 97 aaPredicted RBP9.76□□□□□ -0.85
PCDHGA1-202ENST00000517417 UBE2IP63279 158 aaKnown RBP9.76□□□□□ -0.85
PCDHGA1-202ENST00000517417 RNF4P78317 190 aa9.76□□□□□ -0.85
PCDHGA1-202ENST00000517417 SNTB1Q13884 538 aaKnown RBP9.76□□□□□ -0.85
PCDHGA1-202ENST00000517417 USF2Q15853 346 aaPredicted RBP9.76□□□□□ -0.85
PCDHGA1-202ENST00000517417 C2orf76Q3KRA6 126 aa9.76□□□□□ -0.85
PCDHGA1-202ENST00000517417 PHLDA2Q53GA4 152 aa9.76□□□□□ -0.85
PCDHGA1-202ENST00000517417 AADACL3Q5VUY0 350 aa9.76□□□□□ -0.85
PCDHGA1-202ENST00000517417 OGFOD3Q6PK18 319 aa9.76□□□□□ -0.85
PCDHGA1-202ENST00000517417 C6orf15Q6UXA7 325 aaPredicted RBP9.76□□□□□ -0.85
PCDHGA1-202ENST00000517417 C16orf47Q6ZP98 133 aaPredicted RBP9.76□□□□□ -0.85
PCDHGA1-202ENST00000517417 VN1R4Q7Z5H5 301 aa9.76□□□□□ -0.85
PCDHGA1-202ENST00000517417 FAM71E2Q8N5Q1 922 aa9.76□□□□□ -0.85
PCDHGA1-202ENST00000517417 FAM60AQ9NP50 221 aa9.76□□□□□ -0.85
PCDHGA1-202ENST00000517417 ZMIZ1Q9ULJ6 1067 aa9.76□□□□□ -0.85
PCDHGA1-202ENST00000517417 A0A096LPE4 126 aa9.76□□□□□ -0.85
PCDHGA1-202ENST00000517417 A0A1W2PPZ6 126 aa9.76□□□□□ -0.85
PCDHGA1-202ENST00000517417 RFPL4AA6NLU0 287 aa9.76□□□□□ -0.85
PCDHGA1-202ENST00000517417 RFPL4AL1F8VTS6 287 aa9.76□□□□□ -0.85
PCDHGA1-202ENST00000517417 AQP8O94778 261 aa9.76□□□□□ -0.85
PCDHGA1-202ENST00000517417 NXPH2O95156 264 aa9.76□□□□□ -0.85
PCDHGA1-202ENST00000517417 IFNA17P01571 189 aa9.76□□□□□ -0.85
PCDHGA1-202ENST00000517417 ITGB2P05107 769 aa9.76□□□□□ -0.85
PCDHGA1-202ENST00000517417 POU2F2P09086 479 aa9.76□□□□□ -0.85
PCDHGA1-202ENST00000517417 PNLIPRP2P54317 469 aa9.76□□□□□ -0.85
PCDHGA1-202ENST00000517417 FZD2Q14332 565 aa9.76□□□□□ -0.85
PCDHGA1-202ENST00000517417 RTL6Q6ICC9 239 aa9.76□□□□□ -0.85
PCDHGA1-202ENST00000517417 RNF128Q8TEB7 428 aa9.76□□□□□ -0.85
PCDHGA1-202ENST00000517417 APH1AQ96BI3 265 aa9.76□□□□□ -0.85
PCDHGA1-202ENST00000517417 LRRC3BQ96PB8 259 aa9.76□□□□□ -0.85
PCDHGA1-202ENST00000517417 OR5B12Q96R08 314 aa9.76□□□□□ -0.85
PCDHGA1-202ENST00000517417 MENTQ9BUN1 341 aa9.76□□□□□ -0.85
PCDHGA1-202ENST00000517417 DYNLRB1Q9NP97 96 aa9.76□□□□□ -0.85
PCDHGA1-202ENST00000517417 RPS10P5Q9NQ39 176 aa9.76□□□□□ -0.85
PCDHGA1-202ENST00000517417 GPR173Q9NS66 373 aa9.76□□□□□ -0.85
PCDHGA1-202ENST00000517417 MTFP1Q9UDX5 166 aa9.76□□□□□ -0.85
PCDHGA1-202ENST00000517417 OPN4Q9UHM6 478 aa9.76□□□□□ -0.85
PCDHGA1-202ENST00000517417 AKAP6Q13023 2319 aa9.75□□□□□ -0.85
PCDHGA1-202ENST00000517417 ARGFXA6NJG6 315 aa9.75□□□□□ -0.85
PCDHGA1-202ENST00000517417 HMSDA8MTL9 139 aa9.75□□□□□ -0.85
PCDHGA1-202ENST00000517417 CEBPZOSA8MTT3 80 aa9.75□□□□□ -0.85
PCDHGA1-202ENST00000517417 C4orf51C9J302 202 aa9.75□□□□□ -0.85
PCDHGA1-202ENST00000517417 MPPED1O15442 326 aa9.75□□□□□ -0.85
PCDHGA1-202ENST00000517417 OR2F2O95006 317 aa9.75□□□□□ -0.85
PCDHGA1-202ENST00000517417 FAM157BP0CG42 384 aa9.75□□□□□ -0.85
PCDHGA1-202ENST00000517417 OR2F1Q13607 317 aa9.75□□□□□ -0.85
PCDHGA1-202ENST00000517417 HSD17B13Q7Z5P4 300 aaPredicted RBP9.75□□□□□ -0.85
PCDHGA1-202ENST00000517417 NKAIN3Q8N8D7 197 aa9.75□□□□□ -0.85
PCDHGA1-202ENST00000517417 SUMF1Q8NBK3 374 aa9.75□□□□□ -0.85
PCDHGA1-202ENST00000517417 OR2G2Q8NGZ5 317 aa9.75□□□□□ -0.85
PCDHGA1-202ENST00000517417 KTI12Q96EK9 354 aaPredicted RBP9.75□□□□□ -0.85
PCDHGA1-202ENST00000517417 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP9.75□□□□□ -0.85
PCDHGA1-202ENST00000517417 SPTAN1Q13813 2472 aaKnown RBP9.75□□□□□ -0.85
PCDHGA1-202ENST00000517417 A0A0U1RQK1 487 aa9.75□□□□□ -0.85
PCDHGA1-202ENST00000517417 C5orf67F2Z3F1 127 aa9.75□□□□□ -0.85
PCDHGA1-202ENST00000517417 PIAS2O75928 621 aa9.75□□□□□ -0.85
PCDHGA1-202ENST00000517417 TBX6O95947 436 aaPredicted RBP9.75□□□□□ -0.85
PCDHGA1-202ENST00000517417 GRPP07492 148 aa9.75□□□□□ -0.85
PCDHGA1-202ENST00000517417 NMBP08949 121 aa9.75□□□□□ -0.85
PCDHGA1-202ENST00000517417 TNFSF4P23510 183 aa9.75□□□□□ -0.85
PCDHGA1-202ENST00000517417 ZP1P60852 638 aa9.75□□□□□ -0.85
PCDHGA1-202ENST00000517417 RPL23AP62750 156 aaKnown RBP9.75□□□□□ -0.85
PCDHGA1-202ENST00000517417 IAH1Q2TAA2 248 aaPredicted RBP9.75□□□□□ -0.85
PCDHGA1-202ENST00000517417 HLA-BQ31612 363 aa9.75□□□□□ -0.85
PCDHGA1-202ENST00000517417 TMEM71Q6P5X7 295 aa9.75□□□□□ -0.85
PCDHGA1-202ENST00000517417 TMEM178AQ8NBL3 297 aa9.75□□□□□ -0.85
PCDHGA1-202ENST00000517417 NT5CQ8TCD5 201 aa9.75□□□□□ -0.85
PCDHGA1-202ENST00000517417 SGK3Q96BR1 496 aa9.75□□□□□ -0.85
PCDHGA1-202ENST00000517417 CCDC74BQ96LY2 380 aa9.75□□□□□ -0.85
PCDHGA1-202ENST00000517417 GPR84Q9NQS5 396 aa9.75□□□□□ -0.85
PCDHGA1-202ENST00000517417 IGF2P01344 180 aa9.75□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms