RNA–Protein interactions for RNA: ENST00000516675.1

RN7SKP49-201, Transcript of RNA, 7SK small nuclear pseudogene 49, humanhuman

BASIC

Gene RN7SKP49, Length 260 nt, Biotype misc RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RN7SKP49-201ENST00000516675 SGK1O00141 431 aa0.94□□□□□ -2.26
RN7SKP49-201ENST00000516675 TRDMT1O14717 391 aaKnown RBP0.94□□□□□ -2.26
RN7SKP49-201ENST00000516675 LSM1O15116 133 aaKnown RBP0.94□□□□□ -2.26
RN7SKP49-201ENST00000516675 MAGEB3O15480 346 aa0.94□□□□□ -2.26
RN7SKP49-201ENST00000516675 TAPBPO15533 448 aa0.94□□□□□ -2.26
RN7SKP49-201ENST00000516675 RRP8O43159 456 aaKnown RBP0.94□□□□□ -2.26
RN7SKP49-201ENST00000516675 RBFOX2O43251 390 aaKnown RBP eCLIP0.94□□□□□ -2.26
RN7SKP49-201ENST00000516675 ZNF208O43345 1280 aa0.94□□□□□ -2.26
RN7SKP49-201ENST00000516675 SCGNO76038 276 aa0.94□□□□□ -2.26
RN7SKP49-201ENST00000516675 IGHG4P01861 327 aa0.94□□□□□ -2.26
RN7SKP49-201ENST00000516675 BGLAPP02818 100 aa0.94□□□□□ -2.26
RN7SKP49-201ENST00000516675 ZDHHC11BP0C7U3 371 aa0.94□□□□□ -2.26
RN7SKP49-201ENST00000516675 LINC00869P0C866 280 aa0.94□□□□□ -2.26
RN7SKP49-201ENST00000516675 GKN3PP0CG01 181 aa0.94□□□□□ -2.26
RN7SKP49-201ENST00000516675 NPIPA8P0DM63 369 aa0.94□□□□□ -2.26
RN7SKP49-201ENST00000516675 IGHV3-43DP0DP04 118 aa0.94□□□□□ -2.26
RN7SKP49-201ENST00000516675 PRPS2P11908 318 aa0.94□□□□□ -2.26
RN7SKP49-201ENST00000516675 GABRG2P18507 467 aa0.94□□□□□ -2.26
RN7SKP49-201ENST00000516675 SLC2A5P22732 501 aa0.94□□□□□ -2.26
RN7SKP49-201ENST00000516675 DDOSTP39656 456 aa0.94□□□□□ -2.26
RN7SKP49-201ENST00000516675 MDH1P40925 334 aaKnown RBP0.94□□□□□ -2.26
RN7SKP49-201ENST00000516675 TDO2P48775 406 aa0.94□□□□□ -2.26
RN7SKP49-201ENST00000516675 NCBP2P52298 156 aaKnown RBP eCLIP0.94□□□□□ -2.26
RN7SKP49-201ENST00000516675 SNAP25P60880 206 aa0.94□□□□□ -2.26
RN7SKP49-201ENST00000516675 CBX1P83916 185 aa0.94□□□□□ -2.26
RN7SKP49-201ENST00000516675 TFF3Q07654 80 aa0.94□□□□□ -2.26
RN7SKP49-201ENST00000516675 ELP6Q0PNE2 266 aa0.94□□□□□ -2.26
RN7SKP49-201ENST00000516675 WDR43Q15061 677 aaKnown RBP eCLIP0.94□□□□□ -2.26
RN7SKP49-201ENST00000516675 IMMTQ16891 758 aaKnown RBP0.94□□□□□ -2.26
RN7SKP49-201ENST00000516675 NADK2Q4G0N4 442 aa0.94□□□□□ -2.26
RN7SKP49-201ENST00000516675 RAET1LQ5VY80 246 aa0.94□□□□□ -2.26
RN7SKP49-201ENST00000516675 NCR3LG1Q68D85 454 aa0.94□□□□□ -2.26
RN7SKP49-201ENST00000516675 TMEM225Q6GV28 225 aa0.94□□□□□ -2.26
RN7SKP49-201ENST00000516675 GALNT17Q6IS24 598 aa0.94□□□□□ -2.26
RN7SKP49-201ENST00000516675 SLC25A24Q6NUK1 477 aa0.94□□□□□ -2.26
RN7SKP49-201ENST00000516675 PLBD1Q6P4A8 553 aa0.94□□□□□ -2.26
RN7SKP49-201ENST00000516675 KDELC1Q6UW63 502 aa0.94□□□□□ -2.26
RN7SKP49-201ENST00000516675 CES3Q6UWW8 571 aa0.94□□□□□ -2.26
RN7SKP49-201ENST00000516675 HSDL2Q6YN16 418 aa0.94□□□□□ -2.26
RN7SKP49-201ENST00000516675 LINC00173Q6ZV60 143 aa0.94□□□□□ -2.26
RN7SKP49-201ENST00000516675 PGAP1Q75T13 922 aa0.94□□□□□ -2.26
RN7SKP49-201ENST00000516675 CCDC80Q76M96 950 aa0.94□□□□□ -2.26
RN7SKP49-201ENST00000516675 NANOGNBQ7Z5D8 188 aa0.94□□□□□ -2.26
RN7SKP49-201ENST00000516675 MOB3BQ86TA1 216 aa0.94□□□□□ -2.26
RN7SKP49-201ENST00000516675 TMEM150AQ86TG1 271 aa0.94□□□□□ -2.26
RN7SKP49-201ENST00000516675 TRIM69Q86WT6 500 aa0.94□□□□□ -2.26
RN7SKP49-201ENST00000516675 RIMKLAQ8IXN7 391 aa0.94□□□□□ -2.26
RN7SKP49-201ENST00000516675 SLC38A6Q8IZM9 456 aa0.94□□□□□ -2.26
RN7SKP49-201ENST00000516675 CNPY4Q8N129 248 aa0.94□□□□□ -2.26
RN7SKP49-201ENST00000516675 CLEC4FQ8N1N0 589 aa0.94□□□□□ -2.26
RN7SKP49-201ENST00000516675 OR1N2Q8NGR9 330 aa0.94□□□□□ -2.26
RN7SKP49-201ENST00000516675 N4BP2L2Q92802 583 aaPredicted RBP0.94□□□□□ -2.26
RN7SKP49-201ENST00000516675 C19orf60Q96EN9 201 aa0.94□□□□□ -2.26
RN7SKP49-201ENST00000516675 DYNLL2Q96FJ2 89 aa0.94□□□□□ -2.26
RN7SKP49-201ENST00000516675 AURKBQ96GD4 344 aaPredicted RBP0.94□□□□□ -2.26
RN7SKP49-201ENST00000516675 C4orf36Q96KX1 117 aa0.94□□□□□ -2.26
RN7SKP49-201ENST00000516675 AMDHD1Q96NU7 426 aa0.94□□□□□ -2.26
RN7SKP49-201ENST00000516675 ZNF607Q96SK3 696 aa0.94□□□□□ -2.26
RN7SKP49-201ENST00000516675 SLC39A3Q9BRY0 314 aa0.94□□□□□ -2.26
RN7SKP49-201ENST00000516675 CHAC1Q9BUX1 264 aa0.94□□□□□ -2.26
RN7SKP49-201ENST00000516675 RIOK2Q9BVS4 552 aaKnown RBP0.94□□□□□ -2.26
RN7SKP49-201ENST00000516675 TM9SF3Q9HD45 589 aa0.94□□□□□ -2.26
RN7SKP49-201ENST00000516675 IL26Q9NPH9 171 aa0.94□□□□□ -2.26
RN7SKP49-201ENST00000516675 POLE4Q9NR33 117 aa0.94□□□□□ -2.26
RN7SKP49-201ENST00000516675 SAMSN1Q9NSI8 373 aaKnown RBP0.94□□□□□ -2.26
RN7SKP49-201ENST00000516675 THUMPD1Q9NXG2 353 aaKnown RBP0.94□□□□□ -2.26
RN7SKP49-201ENST00000516675 BFARQ9NZS9 450 aa0.94□□□□□ -2.26
RN7SKP49-201ENST00000516675 CLEC4AQ9UMR7 237 aa0.94□□□□□ -2.26
RN7SKP49-201ENST00000516675 NPIPA1Q9UND3 350 aa0.94□□□□□ -2.26
RN7SKP49-201ENST00000516675 RPH3ALQ9UNE2 315 aa0.94□□□□□ -2.26
RN7SKP49-201ENST00000516675 COPS3Q9UNS2 423 aa0.94□□□□□ -2.26
RN7SKP49-201ENST00000516675 MRPS7Q9Y2R9 242 aaKnown RBP0.94□□□□□ -2.26
RN7SKP49-201ENST00000516675 IKBKGQ9Y6K9 419 aa0.94□□□□□ -2.26
RN7SKP49-201ENST00000516675 ZNF407Q9C0G0 2248 aa0.94□□□□□ -2.26
RN7SKP49-201ENST00000516675 CCDC88CQ9P219 2028 aa0.94□□□□□ -2.26
RN7SKP49-201ENST00000516675 KIAA1549Q9HCM3 1950 aa0.94□□□□□ -2.26
RN7SKP49-201ENST00000516675 MDN1Q9NU22 5596 aa0.94□□□□□ -2.26
RN7SKP49-201ENST00000516675 SF3B1O75533 1304 aaKnown RBP eCLIP0.93□□□□□ -2.26
RN7SKP49-201ENST00000516675 WDR19Q8NEZ3 1342 aa0.93□□□□□ -2.26
RN7SKP49-201ENST00000516675 PRR14LQ5THK1 2151 aa0.93□□□□□ -2.26
RN7SKP49-201ENST00000516675 IGLV3-12A0A075B6K2 115 aa0.93□□□□□ -2.26
RN7SKP49-201ENST00000516675 A0A096LNT2 108 aa0.93□□□□□ -2.26
RN7SKP49-201ENST00000516675 A0A1B0GTQ1 180 aa0.93□□□□□ -2.26
RN7SKP49-201ENST00000516675 A0A1W2PNV4 684 aa0.93□□□□□ -2.26
RN7SKP49-201ENST00000516675 METTL21EPA6NDL7 271 aa0.93□□□□□ -2.26
RN7SKP49-201ENST00000516675 INS-IGF2F8WCM5 200 aa0.93□□□□□ -2.26
RN7SKP49-201ENST00000516675 F8WDY8 70 aa0.93□□□□□ -2.26
RN7SKP49-201ENST00000516675 DYNC1I1O14576 645 aa0.93□□□□□ -2.26
RN7SKP49-201ENST00000516675 XPO1O14980 1071 aaKnown RBP0.93□□□□□ -2.26
RN7SKP49-201ENST00000516675 CCL16O15467 120 aa0.93□□□□□ -2.26
RN7SKP49-201ENST00000516675 RGS16O15492 202 aaPredicted RBP0.93□□□□□ -2.26
RN7SKP49-201ENST00000516675 MED7O43513 233 aa0.93□□□□□ -2.26
RN7SKP49-201ENST00000516675 TBX19O60806 448 aa0.93□□□□□ -2.26
RN7SKP49-201ENST00000516675 HMMRO75330 724 aa0.93□□□□□ -2.26
RN7SKP49-201ENST00000516675 BCAS1O75363 584 aaPredicted RBP0.93□□□□□ -2.26
RN7SKP49-201ENST00000516675 WBP4O75554 376 aaKnown RBP0.93□□□□□ -2.26
RN7SKP49-201ENST00000516675 ERLIN2O94905 339 aa0.93□□□□□ -2.26
RN7SKP49-201ENST00000516675 CSF3P09919 207 aa0.93□□□□□ -2.26
RN7SKP49-201ENST00000516675 DBTP11182 482 aaKnown RBP0.93□□□□□ -2.26
RN7SKP49-201ENST00000516675 TNNI1P19237 187 aa0.93□□□□□ -2.26
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms