RNA–Protein interactions for RNA: ENST00000516060.1

SCARNA23-201, small Cajal body-specific RNA 23, humanhuman

BASIC

Gene SCARNA23, Length 130 nt, Biotype scaRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA23-201ENST00000516060 NOXRED1Q6NXP6 359 aa-1.38□□□□□ -2.63
SCARNA23-201ENST00000516060 CYHR1Q6ZMK1 362 aa-1.38□□□□□ -2.63
SCARNA23-201ENST00000516060 TMEM144Q7Z5S9 345 aa-1.38□□□□□ -2.63
SCARNA23-201ENST00000516060 ECHDC2Q86YB7 292 aa-1.38□□□□□ -2.63
SCARNA23-201ENST00000516060 C11orf72Q8NBR9 251 aa-1.38□□□□□ -2.63
SCARNA23-201ENST00000516060 STXBP6Q8NFX7 210 aa-1.38□□□□□ -2.63
SCARNA23-201ENST00000516060 CENPOQ9BU64 300 aa-1.38□□□□□ -2.63
SCARNA23-201ENST00000516060 TMEM243Q9BU79 118 aa-1.38□□□□□ -2.63
SCARNA23-201ENST00000516060 TMEM27Q9HBJ8 222 aa-1.38□□□□□ -2.63
SCARNA23-201ENST00000516060 KCNJ16Q9NPI9 418 aa-1.38□□□□□ -2.63
SCARNA23-201ENST00000516060 ASH1LQ9NR48 2969 aaKnown RBP-1.38□□□□□ -2.63
SCARNA23-201ENST00000516060 MED9Q9NWA0 146 aa-1.38□□□□□ -2.63
SCARNA23-201ENST00000516060 CFDP1Q9UEE9 299 aaPredicted RBP-1.38□□□□□ -2.63
SCARNA23-201ENST00000516060 SLC23A2Q9UGH3 650 aa-1.38□□□□□ -2.63
SCARNA23-201ENST00000516060 CES1P1Q9UKY3 287 aa-1.38□□□□□ -2.63
SCARNA23-201ENST00000516060 B9D1Q9UPM9 204 aa-1.38□□□□□ -2.63
SCARNA23-201ENST00000516060 ASB3Q9Y575 518 aa-1.38□□□□□ -2.63
SCARNA23-201ENST00000516060 DENND4AQ7Z401 1863 aa-1.39□□□□□ -2.63
SCARNA23-201ENST00000516060 DISP1Q96F81 1524 aa-1.39□□□□□ -2.63
SCARNA23-201ENST00000516060 PCDH15Q96QU1 1955 aa-1.39□□□□□ -2.63
SCARNA23-201ENST00000516060 IGKV1-27A0A075B6S5 117 aa-1.39□□□□□ -2.63
SCARNA23-201ENST00000516060 GLYATL1P3A0A0U1RQE8 302 aa-1.39□□□□□ -2.63
SCARNA23-201ENST00000516060 ISPDA4D126 451 aa-1.39□□□□□ -2.63
SCARNA23-201ENST00000516060 BTBD17A6NE02 478 aa-1.39□□□□□ -2.63
SCARNA23-201ENST00000516060 ZNF729A6NN14 1252 aaPredicted RBP-1.39□□□□□ -2.63
SCARNA23-201ENST00000516060 TAAR5O14804 337 aa-1.39□□□□□ -2.63
SCARNA23-201ENST00000516060 DPM1O60762 260 aa-1.39□□□□□ -2.63
SCARNA23-201ENST00000516060 NPPAP01160 153 aa-1.39□□□□□ -2.63
SCARNA23-201ENST00000516060 IGKV5-2P06315 115 aa-1.39□□□□□ -2.63
SCARNA23-201ENST00000516060 APOA4P06727 396 aa-1.39□□□□□ -2.63
SCARNA23-201ENST00000516060 KRT20P35900 424 aa-1.39□□□□□ -2.63
SCARNA23-201ENST00000516060 HTR2BP41595 481 aa-1.39□□□□□ -2.63
SCARNA23-201ENST00000516060 RBM34P42696 430 aaKnown RBP-1.39□□□□□ -2.63
SCARNA23-201ENST00000516060 RND2P52198 227 aa-1.39□□□□□ -2.63
SCARNA23-201ENST00000516060 PRR3P79522 188 aaKnown RBP-1.39□□□□□ -2.63
SCARNA23-201ENST00000516060 RBP5P82980 135 aa-1.39□□□□□ -2.63
SCARNA23-201ENST00000516060 GABPB1Q06547 395 aaPredicted RBP-1.39□□□□□ -2.63
SCARNA23-201ENST00000516060 CHIT1Q13231 466 aa-1.39□□□□□ -2.63
SCARNA23-201ENST00000516060 RCN2Q14257 317 aa-1.39□□□□□ -2.63
SCARNA23-201ENST00000516060 NCF4Q15080 339 aa-1.39□□□□□ -2.63
SCARNA23-201ENST00000516060 SURF2Q15527 256 aaPredicted RBP-1.39□□□□□ -2.63
SCARNA23-201ENST00000516060 DGUOKQ16854 277 aa-1.39□□□□□ -2.63
SCARNA23-201ENST00000516060 NIPAL3Q6P499 406 aa-1.39□□□□□ -2.63
SCARNA23-201ENST00000516060 CNSTQ6PJW8 725 aa-1.39□□□□□ -2.63
SCARNA23-201ENST00000516060 MDP1Q86V88 176 aa-1.39□□□□□ -2.63
SCARNA23-201ENST00000516060 LRRC8AQ8IWT6 810 aa-1.39□□□□□ -2.63
SCARNA23-201ENST00000516060 ZNF439Q8NDP4 499 aa-1.39□□□□□ -2.63
SCARNA23-201ENST00000516060 FAM3CQ92520 227 aa-1.39□□□□□ -2.63
SCARNA23-201ENST00000516060 ACAT2Q9BWD1 397 aa-1.39□□□□□ -2.63
SCARNA23-201ENST00000516060 SLC5A7Q9GZV3 580 aa-1.39□□□□□ -2.63
SCARNA23-201ENST00000516060 NEUROG2Q9H2A3 272 aa-1.39□□□□□ -2.63
SCARNA23-201ENST00000516060 STX18Q9P2W9 335 aaKnown RBP-1.39□□□□□ -2.63
SCARNA23-201ENST00000516060 KCNE3Q9Y6H6 103 aa-1.39□□□□□ -2.63
SCARNA23-201ENST00000516060 ALPK3Q96L96 1907 aa-1.39□□□□□ -2.63
SCARNA23-201ENST00000516060 SMIM26A0A096LP01 95 aa-1.4□□□□□ -2.63
SCARNA23-201ENST00000516060 IGHV1-69DA0A0B4J2H0 117 aa-1.4□□□□□ -2.63
SCARNA23-201ENST00000516060 A0A0D9SG42 100 aa-1.4□□□□□ -2.63
SCARNA23-201ENST00000516060 TRBV2A0A0J9YWF9 115 aa-1.4□□□□□ -2.63
SCARNA23-201ENST00000516060 ARRDC5A6NEK1 342 aa-1.4□□□□□ -2.63
SCARNA23-201ENST00000516060 CCL21O00585 134 aa-1.4□□□□□ -2.63
SCARNA23-201ENST00000516060 TP53I11O14683 189 aa-1.4□□□□□ -2.63
SCARNA23-201ENST00000516060 TPD52L2O43399 206 aaKnown RBP-1.4□□□□□ -2.63
SCARNA23-201ENST00000516060 TRAPPC3O43617 180 aa-1.4□□□□□ -2.63
SCARNA23-201ENST00000516060 SMPD2O60906 423 aa-1.4□□□□□ -2.63
SCARNA23-201ENST00000516060 PABPC4LP0CB38 370 aaKnown RBP-1.4□□□□□ -2.63
SCARNA23-201ENST00000516060 ERGP11308 486 aa-1.4□□□□□ -2.63
SCARNA23-201ENST00000516060 ATP5C1P36542 298 aaKnown RBP-1.4□□□□□ -2.63
SCARNA23-201ENST00000516060 TALDO1P37837 337 aa-1.4□□□□□ -2.63
SCARNA23-201ENST00000516060 YAP1P46937 504 aaKnown RBP-1.4□□□□□ -2.63
SCARNA23-201ENST00000516060 BFSP1Q12934 665 aa-1.4□□□□□ -2.63
SCARNA23-201ENST00000516060 GK3PQ14409 553 aa-1.4□□□□□ -2.63
SCARNA23-201ENST00000516060 QPRTQ15274 297 aa-1.4□□□□□ -2.63
SCARNA23-201ENST00000516060 NNATQ16517 81 aa-1.4□□□□□ -2.63
SCARNA23-201ENST00000516060 MLIPQ5VWP3 458 aa-1.4□□□□□ -2.63
SCARNA23-201ENST00000516060 TAF8Q7Z7C8 310 aa-1.4□□□□□ -2.63
SCARNA23-201ENST00000516060 NUDCD3Q8IVD9 361 aa-1.4□□□□□ -2.63
SCARNA23-201ENST00000516060 OR10T2Q8NGX3 314 aa-1.4□□□□□ -2.63
SCARNA23-201ENST00000516060 LRRC29Q8WV35 223 aa-1.4□□□□□ -2.63
SCARNA23-201ENST00000516060 FXYD5Q96DB9 178 aa-1.4□□□□□ -2.63
SCARNA23-201ENST00000516060 HSFY1Q96LI6 401 aa-1.4□□□□□ -2.63
SCARNA23-201ENST00000516060 SERPINB12Q96P63 405 aa-1.4□□□□□ -2.63
SCARNA23-201ENST00000516060 CLCC1Q96S66 551 aa-1.4□□□□□ -2.63
SCARNA23-201ENST00000516060 RIT2Q99578 217 aa-1.4□□□□□ -2.63
SCARNA23-201ENST00000516060 BAG1Q99933 345 aaPredicted RBP-1.4□□□□□ -2.63
SCARNA23-201ENST00000516060 TMEM117Q9H0C3 514 aa-1.4□□□□□ -2.63
SCARNA23-201ENST00000516060 PRMT8Q9NR22 394 aaPredicted RBP-1.4□□□□□ -2.63
SCARNA23-201ENST00000516060 COMMD8Q9NX08 183 aa-1.4□□□□□ -2.63
SCARNA23-201ENST00000516060 RAB22AQ9UL26 194 aa-1.4□□□□□ -2.63
SCARNA23-201ENST00000516060 MROH5Q6ZUA9 1318 aa-1.4□□□□□ -2.63
SCARNA23-201ENST00000516060 A0A087WZY1 265 aa-1.41□□□□□ -2.64
SCARNA23-201ENST00000516060 DKC1O60832 514 aaKnown RBP eCLIP-1.41□□□□□ -2.641e-323■■■■■ 54.2
SCARNA23-201ENST00000516060 TBCAO75347 108 aaKnown RBP-1.41□□□□□ -2.64
SCARNA23-201ENST00000516060 RDH16O75452 317 aa-1.41□□□□□ -2.64
SCARNA23-201ENST00000516060 LDHCP07864 332 aa-1.41□□□□□ -2.64
SCARNA23-201ENST00000516060 ABHD2P08910 425 aa-1.41□□□□□ -2.64
SCARNA23-201ENST00000516060 NT5EP21589 574 aa-1.41□□□□□ -2.64
SCARNA23-201ENST00000516060 PAX6P26367 422 aa-1.41□□□□□ -2.64
SCARNA23-201ENST00000516060 HMGB2P26583 209 aaKnown RBP-1.41□□□□□ -2.64
SCARNA23-201ENST00000516060 IL12BP29460 328 aa-1.41□□□□□ -2.64
SCARNA23-201ENST00000516060 RPS15P62841 145 aaKnown RBP-1.41□□□□□ -2.64
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms