RNA–Protein interactions for RNA: ENST00000513562.1

DDX41-216, Transcript of DEAD-box helicase 41, humanhuman

TSL 4

Gene DDX41, Length 552 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-216ENST00000513562 LHBP01229 141 aa8.92□□□□□ -0.98
DDX41-216ENST00000513562 CA6P23280 308 aa8.92□□□□□ -0.98
DDX41-216ENST00000513562 UBE2E1P51965 193 aa8.92□□□□□ -0.98
DDX41-216ENST00000513562 CD69Q07108 199 aa8.92□□□□□ -0.98
DDX41-216ENST00000513562 OR8G1Q15617 311 aa8.92□□□□□ -0.98
DDX41-216ENST00000513562 LY6EQ16553 131 aa8.92□□□□□ -0.98
DDX41-216ENST00000513562 KCNMB1Q16558 191 aa8.92□□□□□ -0.98
DDX41-216ENST00000513562 RSPO1Q2MKA7 263 aaPredicted RBP8.92□□□□□ -0.98
DDX41-216ENST00000513562 ANKDD1AQ495B1 522 aa8.92□□□□□ -0.98
DDX41-216ENST00000513562 ZBTB37Q5TC79 503 aa8.92□□□□□ -0.98
DDX41-216ENST00000513562 PGAP1Q75T13 922 aa8.92□□□□□ -0.98
DDX41-216ENST00000513562 CCDC80Q76M96 950 aa8.92□□□□□ -0.98
DDX41-216ENST00000513562 MICU2Q8IYU8 434 aa8.92□□□□□ -0.98
DDX41-216ENST00000513562 DTX3Q8N9I9 347 aa8.92□□□□□ -0.98
DDX41-216ENST00000513562 PAPD5Q8NDF8 572 aaKnown RBP8.92□□□□□ -0.98
DDX41-216ENST00000513562 WIPF2Q8TF74 440 aaPredicted RBP8.92□□□□□ -0.98
DDX41-216ENST00000513562 SPRYD4Q8WW59 207 aaPredicted RBP8.92□□□□□ -0.98
DDX41-216ENST00000513562 SSX3Q99909 188 aa8.92□□□□□ -0.98
DDX41-216ENST00000513562 CITED2Q99967 270 aaPredicted RBP8.92□□□□□ -0.98
DDX41-216ENST00000513562 B9D2Q9BPU9 175 aa8.92□□□□□ -0.98
DDX41-216ENST00000513562 NPFFR1Q9GZQ6 430 aa8.92□□□□□ -0.98
DDX41-216ENST00000513562 FAM234AQ9H0X4 552 aa8.92□□□□□ -0.98
DDX41-216ENST00000513562 C1orf123Q9NWV4 160 aa8.92□□□□□ -0.98
DDX41-216ENST00000513562 GRHPRQ9UBQ7 328 aa8.92□□□□□ -0.98
DDX41-216ENST00000513562 DNAJB11Q9UBS4 358 aa8.92□□□□□ -0.98
DDX41-216ENST00000513562 COA3Q9Y2R0 106 aaPredicted RBP8.92□□□□□ -0.98
DDX41-216ENST00000513562 ADAM18Q9Y3Q7 739 aa8.92□□□□□ -0.98
DDX41-216ENST00000513562 IGHV3OR15-7A0A075B7D8 119 aa8.91□□□□□ -0.98
DDX41-216ENST00000513562 WI2-2373I1.2A0A1W2PRP0 233 aa8.91□□□□□ -0.98
DDX41-216ENST00000513562 GMDSO60547 372 aa8.91□□□□□ -0.98
DDX41-216ENST00000513562 KHDRBS3O75525 346 aaKnown RBP8.91□□□□□ -0.98
DDX41-216ENST00000513562 CD14P08571 375 aa8.91□□□□□ -0.98
DDX41-216ENST00000513562 ACSM4P0C7M7 580 aa8.91□□□□□ -0.98
DDX41-216ENST00000513562 CD33P20138 364 aa8.91□□□□□ -0.98
DDX41-216ENST00000513562 POU4F2Q12837 409 aa8.91□□□□□ -0.98
DDX41-216ENST00000513562 MALLQ13021 153 aa8.91□□□□□ -0.98
DDX41-216ENST00000513562 DEFB121Q5J5C9 76 aa8.91□□□□□ -0.98
DDX41-216ENST00000513562 NCR3LG1Q68D85 454 aa8.91□□□□□ -0.98
DDX41-216ENST00000513562 PGBD2Q6P3X8 592 aa8.91□□□□□ -0.98
DDX41-216ENST00000513562 ZNF826PQ6ZT77 177 aa8.91□□□□□ -0.98
DDX41-216ENST00000513562 FAM122BQ7Z309 247 aa8.91□□□□□ -0.98
DDX41-216ENST00000513562 DHDDSQ86SQ9 333 aa8.91□□□□□ -0.98
DDX41-216ENST00000513562 OAFQ86UD1 273 aa8.91□□□□□ -0.98
DDX41-216ENST00000513562 GJC3Q8NFK1 279 aa8.91□□□□□ -0.98
DDX41-216ENST00000513562 OR13C2Q8NGS9 318 aa8.91□□□□□ -0.98
DDX41-216ENST00000513562 C8orf46Q8TAG6 207 aa8.91□□□□□ -0.98
DDX41-216ENST00000513562 SLC7A13Q8TCU3 470 aa8.91□□□□□ -0.98
DDX41-216ENST00000513562 C17orf50Q8WW18 174 aa8.91□□□□□ -0.98
DDX41-216ENST00000513562 ACOT11Q8WXI4 607 aaPredicted RBP8.91□□□□□ -0.98
DDX41-216ENST00000513562 SLCO4A1Q96BD0 722 aa8.91□□□□□ -0.98
DDX41-216ENST00000513562 Q96M85 177 aa8.91□□□□□ -0.98
DDX41-216ENST00000513562 CGREF1Q99674 301 aa8.91□□□□□ -0.98
DDX41-216ENST00000513562 DCTN5Q9BTE1 182 aa8.91□□□□□ -0.98
DDX41-216ENST00000513562 SYT4Q9H2B2 425 aa8.91□□□□□ -0.98
DDX41-216ENST00000513562 SERTAD4Q9NUC0 356 aa8.91□□□□□ -0.98
DDX41-216ENST00000513562 BAG5Q9UL15 447 aa8.91□□□□□ -0.98
DDX41-216ENST00000513562 PRPF19Q9UMS4 504 aaKnown RBP8.91□□□□□ -0.98
DDX41-216ENST00000513562 AURKCQ9UQB9 309 aa8.91□□□□□ -0.98
DDX41-216ENST00000513562 POLR1DQ9Y2S0 133 aa8.91□□□□□ -0.98
DDX41-216ENST00000513562 LHFPL6Q9Y693 200 aa8.91□□□□□ -0.98
DDX41-216ENST00000513562 CD300LBA8K4G0 201 aa8.9□□□□□ -0.98
DDX41-216ENST00000513562 EFCAB9A8MZ26 197 aa8.9□□□□□ -0.98
DDX41-216ENST00000513562 CHST1O43916 411 aa8.9□□□□□ -0.98
DDX41-216ENST00000513562 SLC16A7O60669 478 aa8.9□□□□□ -0.98
DDX41-216ENST00000513562 ZNF26P17031 533 aaPredicted RBP8.9□□□□□ -0.98
DDX41-216ENST00000513562 RPL4P36578 427 aaKnown RBP8.9□□□□□ -0.98
DDX41-216ENST00000513562 OR1E2P47887 323 aa8.9□□□□□ -0.98
DDX41-216ENST00000513562 SLC9A3P48764 834 aa8.9□□□□□ -0.98
DDX41-216ENST00000513562 GZMMP51124 257 aa8.9□□□□□ -0.98
DDX41-216ENST00000513562 KRTAP10-11P60412 298 aa8.9□□□□□ -0.98
DDX41-216ENST00000513562 ELF3P78545 371 aaPredicted RBP8.9□□□□□ -0.98
DDX41-216ENST00000513562 ST3GAL3Q11203 375 aa8.9□□□□□ -0.98
DDX41-216ENST00000513562 KRR1Q13601 381 aaKnown RBP8.9□□□□□ -0.98
DDX41-216ENST00000513562 AANATQ16613 207 aa8.9□□□□□ -0.98
DDX41-216ENST00000513562 VMACQ2NL98 169 aa8.9□□□□□ -0.98
DDX41-216ENST00000513562 LRRC75BQ2VPJ9 315 aa8.9□□□□□ -0.98
DDX41-216ENST00000513562 AGKQ53H12 422 aa8.9□□□□□ -0.98
DDX41-216ENST00000513562 WDR38Q5JTN6 314 aa8.9□□□□□ -0.98
DDX41-216ENST00000513562 PGM2L1Q6PCE3 622 aa8.9□□□□□ -0.98
DDX41-216ENST00000513562 LIAT1Q6ZQX7 453 aa8.9□□□□□ -0.98
DDX41-216ENST00000513562 MRPL21Q7Z2W9 205 aaKnown RBP8.9□□□□□ -0.98
DDX41-216ENST00000513562 NRMQ8IXM6 262 aa8.9□□□□□ -0.98
DDX41-216ENST00000513562 Q8N2B8 174 aa8.9□□□□□ -0.98
DDX41-216ENST00000513562 MREGQ8N565 214 aa8.9□□□□□ -0.98
DDX41-216ENST00000513562 DPP10Q8N608 796 aa8.9□□□□□ -0.98
DDX41-216ENST00000513562 FAM216BQ8N7L0 139 aa8.9□□□□□ -0.98
DDX41-216ENST00000513562 OR51G2Q8NGK0 314 aa8.9□□□□□ -0.98
DDX41-216ENST00000513562 RORBQ92753 470 aa8.9□□□□□ -0.98
DDX41-216ENST00000513562 AJUBAQ96IF1 538 aa8.9□□□□□ -0.98
DDX41-216ENST00000513562 ZNF570Q96NI8 536 aa8.9□□□□□ -0.98
DDX41-216ENST00000513562 CCL13Q99616 98 aa8.9□□□□□ -0.98
DDX41-216ENST00000513562 CENPHQ9H3R5 247 aa8.9□□□□□ -0.98
DDX41-216ENST00000513562 RERGLQ9H628 205 aa8.9□□□□□ -0.98
DDX41-216ENST00000513562 METTL8Q9H825 291 aaKnown RBP8.9□□□□□ -0.98
DDX41-216ENST00000513562 ZNF702PQ9H963 129 aa8.9□□□□□ -0.98
DDX41-216ENST00000513562 VSX1Q9NZR4 365 aaPredicted RBP8.9□□□□□ -0.98
DDX41-216ENST00000513562 MRPL15Q9P015 296 aaKnown RBP8.9□□□□□ -0.98
DDX41-216ENST00000513562 hCG_1807616A0A1W2PRN6 198 aa8.89□□□□□ -0.99
DDX41-216ENST00000513562 TMEM120BA0PK00 339 aa8.89□□□□□ -0.99
DDX41-216ENST00000513562 A6NLC8 198 aa8.89□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms