RNA–Protein interactions for RNA: ENST00000513495.5

SH3TC1-223, Transcript of SH3 domain and tetratricopeptide repeats 1, human

TSL 4

Gene SH3TC1, Length 600 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SH3TC1-223	ENST00000513495	TAS2R43	P59537	309 aa		13.54	□□□□□ -0.24
SH3TC1-223	ENST00000513495	SNRPD2	P62316	118 aa	Known RBP	13.54	□□□□□ -0.24
SH3TC1-223	ENST00000513495	ADIPOQ	Q15848	244 aa		13.54	□□□□□ -0.24
SH3TC1-223	ENST00000513495	GFOD2	Q3B7J2	385 aa		13.54	□□□□□ -0.24
SH3TC1-223	ENST00000513495	MBNL2	Q5VZF2	373 aa	Known RBP	13.54	□□□□□ -0.24
SH3TC1-223	ENST00000513495	PGAP1	Q75T13	922 aa		13.54	□□□□□ -0.24
SH3TC1-223	ENST00000513495	LILRB1	Q8NHL6	650 aa	Predicted RBP	13.54	□□□□□ -0.24
SH3TC1-223	ENST00000513495	KLF14	Q8TD94	323 aa	Predicted RBP	13.54	□□□□□ -0.24
SH3TC1-223	ENST00000513495	SPRYD4	Q8WW59	207 aa	Predicted RBP	13.54	□□□□□ -0.24
SH3TC1-223	ENST00000513495	PELI1	Q96FA3	418 aa		13.54	□□□□□ -0.24
SH3TC1-223	ENST00000513495	MARS2	Q96GW9	593 aa	Known RBP	13.54	□□□□□ -0.24
SH3TC1-223	ENST00000513495	NUFIP1	Q9UHK0	495 aa	Known RBP	13.54	□□□□□ -0.24
SH3TC1-223	ENST00000513495		A0A0U1RQV5	110 aa		13.53	□□□□□ -0.24
SH3TC1-223	ENST00000513495	PLSCR5	A0PG75	271 aa		13.53	□□□□□ -0.24
SH3TC1-223	ENST00000513495	GGT3P	A6NGU5	568 aa		13.53	□□□□□ -0.24
SH3TC1-223	ENST00000513495	TIMM8A	O60220	97 aa	Predicted RBP	13.53	□□□□□ -0.24
SH3TC1-223	ENST00000513495	MTRF1	O75570	445 aa	Known RBP	13.53	□□□□□ -0.24
SH3TC1-223	ENST00000513495	ZNF250	P15622	560 aa		13.53	□□□□□ -0.24
SH3TC1-223	ENST00000513495	PSMB10	P40306	273 aa		13.53	□□□□□ -0.24
SH3TC1-223	ENST00000513495	EVX1	P49640	407 aa		13.53	□□□□□ -0.24
SH3TC1-223	ENST00000513495	ERVS71-1	P61550	626 aa		13.53	□□□□□ -0.24
SH3TC1-223	ENST00000513495	MVK	Q03426	396 aa		13.53	□□□□□ -0.24
SH3TC1-223	ENST00000513495	SNAI3	Q3KNW1	292 aa		13.53	□□□□□ -0.24
SH3TC1-223	ENST00000513495	KCTD21	Q4G0X4	260 aa		13.53	□□□□□ -0.24
SH3TC1-223	ENST00000513495	CCDC58	Q4VC31	144 aa		13.53	□□□□□ -0.24
SH3TC1-223	ENST00000513495	ZMAT1	Q5H9K5	638 aa		13.53	□□□□□ -0.24
SH3TC1-223	ENST00000513495	FBXW12	Q6X9E4	464 aa		13.53	□□□□□ -0.24
SH3TC1-223	ENST00000513495	FTMT	Q8N4E7	242 aa		13.53	□□□□□ -0.24
SH3TC1-223	ENST00000513495	OR8B12	Q8NGG6	310 aa		13.53	□□□□□ -0.24
SH3TC1-223	ENST00000513495	RORB	Q92753	470 aa		13.53	□□□□□ -0.24
SH3TC1-223	ENST00000513495	ITFG2	Q969R8	447 aa		13.53	□□□□□ -0.24
SH3TC1-223	ENST00000513495	REEP6	Q96HR9	211 aa		13.53	□□□□□ -0.24
SH3TC1-223	ENST00000513495	SIGLEC11	Q96RL6	698 aa		13.53	□□□□□ -0.24
SH3TC1-223	ENST00000513495	PLEKHF2	Q9H8W4	249 aa		13.53	□□□□□ -0.24
SH3TC1-223	ENST00000513495	ISG20L2	Q9H9L3	353 aa	Known RBP	13.53	□□□□□ -0.24
SH3TC1-223	ENST00000513495	PAK1IP1	Q9NWT1	392 aa	Predicted RBP	13.53	□□□□□ -0.24
SH3TC1-223	ENST00000513495	BABAM2	Q9NXR7	383 aa		13.53	□□□□□ -0.24
SH3TC1-223	ENST00000513495	CGGBP1	Q9UFW8	167 aa	Predicted RBP	13.53	□□□□□ -0.24
SH3TC1-223	ENST00000513495	CLEC2D	Q9UHP7	191 aa		13.53	□□□□□ -0.24
SH3TC1-223	ENST00000513495	PLCE1	Q9P212	2302 aa		13.53	□□□□□ -0.24
SH3TC1-223	ENST00000513495	MT-ND2	P03891	347 aa		13.52	□□□□□ -0.25
SH3TC1-223	ENST00000513495	ERCC1	P07992	297 aa	Predicted RBP	13.52	□□□□□ -0.25
SH3TC1-223	ENST00000513495	UBC	P0CG48	685 aa	Known RBP	13.52	□□□□□ -0.25
SH3TC1-223	ENST00000513495	LIPA	P38571	399 aa		13.52	□□□□□ -0.25
SH3TC1-223	ENST00000513495	TGM4	P49221	684 aa		13.52	□□□□□ -0.25
SH3TC1-223	ENST00000513495	CCR9	P51686	369 aa		13.52	□□□□□ -0.25
SH3TC1-223	ENST00000513495	MFGE8	Q08431	387 aa	Predicted RBP	13.52	□□□□□ -0.25
SH3TC1-223	ENST00000513495	GK2	Q14410	553 aa	Predicted RBP	13.52	□□□□□ -0.25
SH3TC1-223	ENST00000513495	MED22	Q15528	200 aa		13.52	□□□□□ -0.25
SH3TC1-223	ENST00000513495	EFNB3	Q15768	340 aa		13.52	□□□□□ -0.25
SH3TC1-223	ENST00000513495	NKPD1	Q17RQ9	610 aa		13.52	□□□□□ -0.25
SH3TC1-223	ENST00000513495	GLYATL3	Q5SZD4	288 aa		13.52	□□□□□ -0.25
SH3TC1-223	ENST00000513495	OR2G6	Q5TZ20	316 aa		13.52	□□□□□ -0.25
SH3TC1-223	ENST00000513495	FDX2	Q6P4F2	183 aa		13.52	□□□□□ -0.25
SH3TC1-223	ENST00000513495	RPL22L1	Q6P5R6	122 aa	Known RBP	13.52	□□□□□ -0.25
SH3TC1-223	ENST00000513495	PRSS45	Q7RTY3	260 aa		13.52	□□□□□ -0.25
SH3TC1-223	ENST00000513495	CATSPERD	Q86XM0	798 aa		13.52	□□□□□ -0.25
SH3TC1-223	ENST00000513495	KLB	Q86Z14	1044 aa		13.52	□□□□□ -0.25
SH3TC1-223	ENST00000513495	ELMOD2	Q8IZ81	293 aa		13.52	□□□□□ -0.25
SH3TC1-223	ENST00000513495	NANOGP1	Q8N7R0	232 aa		13.52	□□□□□ -0.25
SH3TC1-223	ENST00000513495	OR2G2	Q8NGZ5	317 aa		13.52	□□□□□ -0.25
SH3TC1-223	ENST00000513495	GATAD2B	Q8WXI9	593 aa		13.52	□□□□□ -0.25
SH3TC1-223	ENST00000513495	CMBL	Q96DG6	245 aa		13.52	□□□□□ -0.25
SH3TC1-223	ENST00000513495	SYT3	Q9BQG1	590 aa		13.52	□□□□□ -0.25
SH3TC1-223	ENST00000513495	ZNF649	Q9BS31	505 aa		13.52	□□□□□ -0.25
SH3TC1-223	ENST00000513495	COMMD4	Q9H0A8	199 aa		13.52	□□□□□ -0.25
SH3TC1-223	ENST00000513495	DYNLRB1	Q9NP97	96 aa		13.52	□□□□□ -0.25
SH3TC1-223	ENST00000513495	CYSLTR2	Q9NS75	346 aa		13.52	□□□□□ -0.25
SH3TC1-223	ENST00000513495	CBLN4	Q9NTU7	201 aa		13.52	□□□□□ -0.25
SH3TC1-223	ENST00000513495	FZR1	Q9UM11	496 aa		13.52	□□□□□ -0.25
SH3TC1-223	ENST00000513495	PMF1-BGLAP	U3KQ54	211 aa		13.52	□□□□□ -0.25
SH3TC1-223	ENST00000513495	TRBV2	A0A0J9YWF9	115 aa		13.51	□□□□□ -0.25
SH3TC1-223	ENST00000513495		A0A1B0GVI7	797 aa		13.51	□□□□□ -0.25
SH3TC1-223	ENST00000513495		A0A1W2PPR1	153 aa		13.51	□□□□□ -0.25
SH3TC1-223	ENST00000513495		M0R233	179 aa		13.51	□□□□□ -0.25
SH3TC1-223	ENST00000513495	SRSF10	O75494	262 aa	Known RBP	13.51	□□□□□ -0.25
SH3TC1-223	ENST00000513495	PNP	P00491	289 aa		13.51	□□□□□ -0.25
SH3TC1-223	ENST00000513495	IGHV3-13	P01766	116 aa		13.51	□□□□□ -0.25
SH3TC1-223	ENST00000513495	ZNF12	P17014	697 aa		13.51	□□□□□ -0.25
SH3TC1-223	ENST00000513495	ALKBH1	Q13686	389 aa	Known RBP	13.51	□□□□□ -0.25
SH3TC1-223	ENST00000513495	ZNF676	Q8N7Q3	588 aa		13.51	□□□□□ -0.25
SH3TC1-223	ENST00000513495	CCDC54	Q8NEL0	328 aa		13.51	□□□□□ -0.25
SH3TC1-223	ENST00000513495	OR2AE1	Q8NHA4	323 aa		13.51	□□□□□ -0.25
SH3TC1-223	ENST00000513495	SGK3	Q96BR1	496 aa		13.51	□□□□□ -0.25
SH3TC1-223	ENST00000513495	HAVCR1	Q96D42	359 aa		13.51	□□□□□ -0.25
SH3TC1-223	ENST00000513495	NR1H4	Q96RI1	486 aa	Predicted RBP	13.51	□□□□□ -0.25
SH3TC1-223	ENST00000513495	CCL19	Q99731	98 aa		13.51	□□□□□ -0.25
SH3TC1-223	ENST00000513495	MRPL37	Q9BZE1	423 aa	Known RBP	13.51	□□□□□ -0.25
SH3TC1-223	ENST00000513495	VCX3A	Q9NNX9	186 aa		13.51	□□□□□ -0.25
SH3TC1-223	ENST00000513495	G6PC2	Q9NQR9	355 aa		13.51	□□□□□ -0.25
SH3TC1-223	ENST00000513495	LAMP3	Q9UQV4	416 aa		13.51	□□□□□ -0.25
SH3TC1-223	ENST00000513495	ROS1	P08922	2347 aa		13.51	□□□□□ -0.25
SH3TC1-223	ENST00000513495	IGLV3-9	A0A075B6K5	115 aa		13.5	□□□□□ -0.25
SH3TC1-223	ENST00000513495	TMEM212	A6NML5	194 aa		13.5	□□□□□ -0.25
SH3TC1-223	ENST00000513495	ATP6V1B1	P15313	513 aa		13.5	□□□□□ -0.25
SH3TC1-223	ENST00000513495	KITLG	P21583	273 aa		13.5	□□□□□ -0.25
SH3TC1-223	ENST00000513495	MPV17	P39210	176 aa		13.5	□□□□□ -0.25
SH3TC1-223	ENST00000513495	DDOST	P39656	456 aa		13.5	□□□□□ -0.25
SH3TC1-223	ENST00000513495	BDH1	Q02338	343 aa		13.5	□□□□□ -0.25
SH3TC1-223	ENST00000513495	ZNF92	Q03936	586 aa		13.5	□□□□□ -0.25

Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms