RNA–Protein interactions for RNA: ENST00000512452.1

DEPDC1B-206, Transcript of DEP domain containing 1B, humanhuman

TSL 2

Gene DEPDC1B, Length 661 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC1B-206ENST00000512452 ZNF57Q68EA5 555 aaPredicted RBP11.54□□□□□ -0.56
DEPDC1B-206ENST00000512452 SERPINA12Q8IW75 414 aa11.54□□□□□ -0.56
DEPDC1B-206ENST00000512452 SYNPRQ8TBG9 265 aa11.54□□□□□ -0.56
DEPDC1B-206ENST00000512452 DEDD2Q8WXF8 326 aa11.54□□□□□ -0.56
DEPDC1B-206ENST00000512452 PTX4Q96A99 478 aa11.54□□□□□ -0.56
DEPDC1B-206ENST00000512452 PARPBPQ9NWS1 579 aa11.54□□□□□ -0.56
DEPDC1B-206ENST00000512452 PLA2G3Q9NZ20 509 aa11.54□□□□□ -0.56
DEPDC1B-206ENST00000512452 TUBD1Q9UJT1 453 aa11.54□□□□□ -0.56
DEPDC1B-206ENST00000512452 MCTS1Q9ULC4 181 aaKnown RBP11.54□□□□□ -0.56
DEPDC1B-206ENST00000512452 A0A0A6YYH2 397 aa11.53□□□□□ -0.56
DEPDC1B-206ENST00000512452 FAM240BA0A1B0GVZ2 78 aa11.53□□□□□ -0.56
DEPDC1B-206ENST00000512452 A6NJ64 397 aa11.53□□□□□ -0.56
DEPDC1B-206ENST00000512452 ZNF724A8MTY0 619 aa11.53□□□□□ -0.56
DEPDC1B-206ENST00000512452 H0YC42 278 aa11.53□□□□□ -0.56
DEPDC1B-206ENST00000512452 GABARAPH6UMI1 98 aa11.53□□□□□ -0.56
DEPDC1B-206ENST00000512452 P2RY10O00398 339 aa11.53□□□□□ -0.56
DEPDC1B-206ENST00000512452 RER1O15258 196 aa11.53□□□□□ -0.56
DEPDC1B-206ENST00000512452 FAM157BP0CG42 384 aa11.53□□□□□ -0.56
DEPDC1B-206ENST00000512452 OTX1P32242 354 aaPredicted RBP11.53□□□□□ -0.56
DEPDC1B-206ENST00000512452 DDOSTP39656 456 aa11.53□□□□□ -0.56
DEPDC1B-206ENST00000512452 CX3CR1P49238 355 aa11.53□□□□□ -0.56
DEPDC1B-206ENST00000512452 STARP49675 285 aa11.53□□□□□ -0.56
DEPDC1B-206ENST00000512452 AP3S2P59780 193 aa11.53□□□□□ -0.56
DEPDC1B-206ENST00000512452 PCBD1P61457 104 aa11.53□□□□□ -0.56
DEPDC1B-206ENST00000512452 PPIAP62937 165 aaKnown RBP11.53□□□□□ -0.56
DEPDC1B-206ENST00000512452 SCRN3Q0VDG4 424 aa11.53□□□□□ -0.56
DEPDC1B-206ENST00000512452 SLC10A1Q14973 349 aa11.53□□□□□ -0.56
DEPDC1B-206ENST00000512452 TGIF1Q15583 401 aa11.53□□□□□ -0.56
DEPDC1B-206ENST00000512452 ELFN2Q5R3F8 820 aa11.53□□□□□ -0.56
DEPDC1B-206ENST00000512452 ASPHD2Q6ICH7 369 aa11.53□□□□□ -0.56
DEPDC1B-206ENST00000512452 ZNF529Q6P280 563 aa11.53□□□□□ -0.56
DEPDC1B-206ENST00000512452 PLET1Q6UQ28 207 aa11.53□□□□□ -0.56
DEPDC1B-206ENST00000512452 IGFL2Q6UWQ7 119 aa11.53□□□□□ -0.56
DEPDC1B-206ENST00000512452 Q6ZSR3 168 aa11.53□□□□□ -0.56
DEPDC1B-206ENST00000512452 PGAP1Q75T13 922 aa11.53□□□□□ -0.56
DEPDC1B-206ENST00000512452 DOK3Q7L591 496 aa11.53□□□□□ -0.56
DEPDC1B-206ENST00000512452 GALNTL5Q7Z4T8 443 aa11.53□□□□□ -0.56
DEPDC1B-206ENST00000512452 LUZP2Q86TE4 346 aa11.53□□□□□ -0.56
DEPDC1B-206ENST00000512452 UBQLNLQ8IYU4 475 aa11.53□□□□□ -0.56
DEPDC1B-206ENST00000512452 FAM109AQ8N4B1 249 aa11.53□□□□□ -0.56
DEPDC1B-206ENST00000512452 YIPF5Q969M3 257 aa11.53□□□□□ -0.56
DEPDC1B-206ENST00000512452 PPP1R14AQ96A00 147 aa11.53□□□□□ -0.56
DEPDC1B-206ENST00000512452 SMAD5Q99717 465 aaKnown RBP11.53□□□□□ -0.56
DEPDC1B-206ENST00000512452 UQCC2Q9BRT2 126 aa11.53□□□□□ -0.56
DEPDC1B-206ENST00000512452 RBM24Q9BX46 236 aaKnown RBP11.53□□□□□ -0.56
DEPDC1B-206ENST00000512452 RNF121Q9H920 327 aa11.53□□□□□ -0.56
DEPDC1B-206ENST00000512452 ZNF71Q9NQZ8 489 aaPredicted RBP11.53□□□□□ -0.56
DEPDC1B-206ENST00000512452 TMEM38BQ9NVV0 291 aa11.53□□□□□ -0.56
DEPDC1B-206ENST00000512452 TAS2R4Q9NYW5 299 aa11.53□□□□□ -0.56
DEPDC1B-206ENST00000512452 A0A0U1RQV5 110 aa11.52□□□□□ -0.57
DEPDC1B-206ENST00000512452 A0A1B0GTI1 187 aa11.52□□□□□ -0.57
DEPDC1B-206ENST00000512452 EEF1E1O43324 174 aaKnown RBP11.52□□□□□ -0.57
DEPDC1B-206ENST00000512452 XRCC3O43542 346 aa11.52□□□□□ -0.57
DEPDC1B-206ENST00000512452 SSX4O60224 188 aa11.52□□□□□ -0.57
DEPDC1B-206ENST00000512452 ECDO95905 644 aaPredicted RBP11.52□□□□□ -0.57
DEPDC1B-206ENST00000512452 F10P00742 488 aa11.52□□□□□ -0.57
DEPDC1B-206ENST00000512452 IGLV3-1P01715 115 aa11.52□□□□□ -0.57
DEPDC1B-206ENST00000512452 MAGEA5P43359 124 aa11.52□□□□□ -0.57
DEPDC1B-206ENST00000512452 KIR2DL3P43628 341 aa11.52□□□□□ -0.57
DEPDC1B-206ENST00000512452 ZNF121P58317 390 aaPredicted RBP11.52□□□□□ -0.57
DEPDC1B-206ENST00000512452 ARG2P78540 354 aa11.52□□□□□ -0.57
DEPDC1B-206ENST00000512452 RAB35Q15286 201 aa11.52□□□□□ -0.57
DEPDC1B-206ENST00000512452 RNPS1Q15287 305 aaKnown RBP11.52□□□□□ -0.57
DEPDC1B-206ENST00000512452 ZNF766Q5HY98 468 aa11.52□□□□□ -0.57
DEPDC1B-206ENST00000512452 TMEM69Q5SWH9 247 aa11.52□□□□□ -0.57
DEPDC1B-206ENST00000512452 ANKRD16Q6P6B7 361 aa11.52□□□□□ -0.57
DEPDC1B-206ENST00000512452 DNM1P46Q6ZS02 220 aa11.52□□□□□ -0.57
DEPDC1B-206ENST00000512452 CDH24Q86UP0 819 aa11.52□□□□□ -0.57
DEPDC1B-206ENST00000512452 LYPD6Q86Y78 171 aa11.52□□□□□ -0.57
DEPDC1B-206ENST00000512452 ZNF283Q8N7M2 679 aa11.52□□□□□ -0.57
DEPDC1B-206ENST00000512452 CELF2-AS1Q8N7Q2 184 aa11.52□□□□□ -0.57
DEPDC1B-206ENST00000512452 DNAAF1Q8NEP3 725 aa11.52□□□□□ -0.57
DEPDC1B-206ENST00000512452 OR5D14Q8NGL3 314 aa11.52□□□□□ -0.57
DEPDC1B-206ENST00000512452 ROBO4Q8WZ75 1007 aa11.52□□□□□ -0.57
DEPDC1B-206ENST00000512452 SPTSSAQ969W0 71 aa11.52□□□□□ -0.57
DEPDC1B-206ENST00000512452 MARVELD3Q96A59 401 aa11.52□□□□□ -0.57
DEPDC1B-206ENST00000512452 CREB3L1Q96BA8 519 aa11.52□□□□□ -0.57
DEPDC1B-206ENST00000512452 FAM3DQ96BQ1 224 aa11.52□□□□□ -0.57
DEPDC1B-206ENST00000512452 C10orf35Q96D05 121 aa11.52□□□□□ -0.57
DEPDC1B-206ENST00000512452 NEDD4LQ96PU5 975 aa11.52□□□□□ -0.57
DEPDC1B-206ENST00000512452 HES7Q9BYE0 225 aa11.52□□□□□ -0.57
DEPDC1B-206ENST00000512452 ZNF552Q9H707 407 aaPredicted RBP11.52□□□□□ -0.57
DEPDC1B-206ENST00000512452 GP6Q9HCN6 339 aa11.52□□□□□ -0.57
DEPDC1B-206ENST00000512452 TMEM138Q9NPI0 162 aa11.52□□□□□ -0.57
DEPDC1B-206ENST00000512452 DIABLOQ9NR28 239 aa11.52□□□□□ -0.57
DEPDC1B-206ENST00000512452 COPZ2Q9P299 210 aa11.52□□□□□ -0.57
DEPDC1B-206ENST00000512452 CACNG2Q9Y698 323 aa11.52□□□□□ -0.57
DEPDC1B-206ENST00000512452 NCKAP5O14513 1909 aa11.51□□□□□ -0.57
DEPDC1B-206ENST00000512452 LINC00854A0A1B0GVQ3 168 aa11.51□□□□□ -0.57
DEPDC1B-206ENST00000512452 NAP1L6A6NFF2 107 aa11.51□□□□□ -0.57
DEPDC1B-206ENST00000512452 ZNF891A8MT65 544 aaPredicted RBP11.51□□□□□ -0.57
DEPDC1B-206ENST00000512452 FAM166BA8MTA8 275 aa11.51□□□□□ -0.57
DEPDC1B-206ENST00000512452 ITGA5P08648 1049 aa11.51□□□□□ -0.57
DEPDC1B-206ENST00000512452 GSTT2BP0CG30 244 aa11.51□□□□□ -0.57
DEPDC1B-206ENST00000512452 ZNF20P17024 532 aa11.51□□□□□ -0.57
DEPDC1B-206ENST00000512452 RAB6AP20340 208 aa11.51□□□□□ -0.57
DEPDC1B-206ENST00000512452 HTR2CP28335 458 aa11.51□□□□□ -0.57
DEPDC1B-206ENST00000512452 BDKRB2P30411 391 aa11.51□□□□□ -0.57
DEPDC1B-206ENST00000512452 SLC6A1P30531 599 aa11.51□□□□□ -0.57
DEPDC1B-206ENST00000512452 PTH2RP49190 550 aa11.51□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms