RNA–Protein interactions for RNA: ENST00000511955.5

TRAPPC11-208, Transcript of trafficking protein particle complex 11, humanhuman

TSL 2

Gene TRAPPC11, Length 2,342 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-208ENST00000511955 ALG9Q9H6U8 611 aa4.44□□□□□ -1.7
TRAPPC11-208ENST00000511955 RDH14Q9HBH5 336 aa4.44□□□□□ -1.7
TRAPPC11-208ENST00000511955 ZNF224Q9NZL3 707 aa4.44□□□□□ -1.7
TRAPPC11-208ENST00000511955 LGALS13Q9UHV8 139 aa4.44□□□□□ -1.7
TRAPPC11-208ENST00000511955 HHLA2Q9UM44 414 aa4.44□□□□□ -1.7
TRAPPC11-208ENST00000511955 ZBTB32Q9Y2Y4 487 aaPredicted RBP4.44□□□□□ -1.7
TRAPPC11-208ENST00000511955 YARS2Q9Y2Z4 477 aaKnown RBP4.44□□□□□ -1.7
TRAPPC11-208ENST00000511955 RAP2CQ9Y3L5 183 aa4.44□□□□□ -1.7
TRAPPC11-208ENST00000511955 RAI2Q9Y5P3 530 aa4.44□□□□□ -1.7
TRAPPC11-208ENST00000511955 HSPE1-MOB4S4R3N1 261 aa4.44□□□□□ -1.7
TRAPPC11-208ENST00000511955 A0A1B0GTW7 788 aa4.43□□□□□ -1.7
TRAPPC11-208ENST00000511955 LRRC3CA6NJW4 275 aa4.43□□□□□ -1.7
TRAPPC11-208ENST00000511955 RNF212BA8MTL3 300 aa4.43□□□□□ -1.7
TRAPPC11-208ENST00000511955 F8VVB4 439 aa4.43□□□□□ -1.7
TRAPPC11-208ENST00000511955 F8VWA3 439 aa4.43□□□□□ -1.7
TRAPPC11-208ENST00000511955 MPZL2O60487 215 aa4.43□□□□□ -1.7
TRAPPC11-208ENST00000511955 ENTPD6O75354 484 aa4.43□□□□□ -1.7
TRAPPC11-208ENST00000511955 CLDN9O95484 217 aa4.43□□□□□ -1.7
TRAPPC11-208ENST00000511955 MT-CO2P00403 227 aa4.43□□□□□ -1.7
TRAPPC11-208ENST00000511955 HPRP00739 348 aa4.43□□□□□ -1.7
TRAPPC11-208ENST00000511955 HPXP02790 462 aa4.43□□□□□ -1.7
TRAPPC11-208ENST00000511955 MT-ND4P03905 459 aa4.43□□□□□ -1.7
TRAPPC11-208ENST00000511955 WNT2P09544 360 aa4.43□□□□□ -1.7
TRAPPC11-208ENST00000511955 NPSP0C0P6 89 aa4.43□□□□□ -1.7
TRAPPC11-208ENST00000511955 OR10J4P0C629 311 aa4.43□□□□□ -1.7
TRAPPC11-208ENST00000511955 ETFAP13804 333 aa4.43□□□□□ -1.7
TRAPPC11-208ENST00000511955 ZNF43P17038 809 aa4.43□□□□□ -1.7
TRAPPC11-208ENST00000511955 FPR3P25089 353 aa4.43□□□□□ -1.7
TRAPPC11-208ENST00000511955 PAX6P26367 422 aa4.43□□□□□ -1.7
TRAPPC11-208ENST00000511955 ITPKBP27987 946 aa4.43□□□□□ -1.7
TRAPPC11-208ENST00000511955 GABRA4P48169 554 aa4.43□□□□□ -1.7
TRAPPC11-208ENST00000511955 DNASE1L1P49184 302 aa4.43□□□□□ -1.7
TRAPPC11-208ENST00000511955 CRISP1P54107 249 aa4.43□□□□□ -1.7
TRAPPC11-208ENST00000511955 SLC18A1P54219 525 aa4.43□□□□□ -1.7
TRAPPC11-208ENST00000511955 CDH12P55289 794 aa4.43□□□□□ -1.7
TRAPPC11-208ENST00000511955 TAS2R38P59533 333 aa4.43□□□□□ -1.7
TRAPPC11-208ENST00000511955 BTN1A1Q13410 526 aa4.43□□□□□ -1.7
TRAPPC11-208ENST00000511955 ZNF181Q2M3W8 571 aa4.43□□□□□ -1.7
TRAPPC11-208ENST00000511955 RPEL1Q2QD12 228 aa4.43□□□□□ -1.7
TRAPPC11-208ENST00000511955 RFTN2Q52LD8 501 aaPredicted RBP4.43□□□□□ -1.7
TRAPPC11-208ENST00000511955 Q5BKY6 102 aa4.43□□□□□ -1.7
TRAPPC11-208ENST00000511955 DMRTC1Q5HYR2 192 aa4.43□□□□□ -1.7
TRAPPC11-208ENST00000511955 C6orf52Q5T4I8 152 aa4.43□□□□□ -1.7
TRAPPC11-208ENST00000511955 STUMQ69YW2 141 aa4.43□□□□□ -1.7
TRAPPC11-208ENST00000511955 TMEM200BQ69YZ2 307 aa4.43□□□□□ -1.7
TRAPPC11-208ENST00000511955 ZNF774Q6NX45 483 aa4.43□□□□□ -1.7
TRAPPC11-208ENST00000511955 TFAP2EQ6VUC0 442 aa4.43□□□□□ -1.7
TRAPPC11-208ENST00000511955 CARM1Q86X55 608 aa4.43□□□□□ -1.7
TRAPPC11-208ENST00000511955 UEVLDQ8IX04 471 aa4.43□□□□□ -1.7
TRAPPC11-208ENST00000511955 RIMKLAQ8IXN7 391 aa4.43□□□□□ -1.7
TRAPPC11-208ENST00000511955 RNF113BQ8IZP6 322 aaKnown RBP4.43□□□□□ -1.7
TRAPPC11-208ENST00000511955 SVOPLQ8N434 492 aa4.43□□□□□ -1.7
TRAPPC11-208ENST00000511955 MFSD4AQ8N468 514 aa4.43□□□□□ -1.7
TRAPPC11-208ENST00000511955 NLGN4YQ8NFZ3 816 aaPredicted RBP4.43□□□□□ -1.7
TRAPPC11-208ENST00000511955 OR4M2Q8NGB6 313 aa4.43□□□□□ -1.7
TRAPPC11-208ENST00000511955 OR5AU1Q8NGC0 362 aa4.43□□□□□ -1.7
TRAPPC11-208ENST00000511955 RAB2BQ8WUD1 216 aa4.43□□□□□ -1.7
TRAPPC11-208ENST00000511955 TBRG4Q969Z0 631 aaKnown RBP eCLIP4.43□□□□□ -1.7
TRAPPC11-208ENST00000511955 VOPP1Q96AW1 172 aa4.43□□□□□ -1.7
TRAPPC11-208ENST00000511955 BPIFA2Q96DR5 249 aa4.43□□□□□ -1.7
TRAPPC11-208ENST00000511955 ST6GAL2Q96JF0 529 aa4.43□□□□□ -1.7
TRAPPC11-208ENST00000511955 ZNF599Q96NL3 588 aa4.43□□□□□ -1.7
TRAPPC11-208ENST00000511955 DPCDQ9BVM2 203 aaPredicted RBP4.43□□□□□ -1.7
TRAPPC11-208ENST00000511955 OSBPL11Q9BXB4 747 aa4.43□□□□□ -1.7
TRAPPC11-208ENST00000511955 TLNRD1Q9H1K6 362 aa4.43□□□□□ -1.7
TRAPPC11-208ENST00000511955 ANKRD19PQ9H560 264 aa4.43□□□□□ -1.7
TRAPPC11-208ENST00000511955 EFCAB1Q9HAE3 211 aa4.43□□□□□ -1.7
TRAPPC11-208ENST00000511955 AGPAT4Q9NRZ5 378 aa4.43□□□□□ -1.7
TRAPPC11-208ENST00000511955 CD84Q9UIB8 345 aa4.43□□□□□ -1.7
TRAPPC11-208ENST00000511955 RNF11Q9Y3C5 154 aa4.43□□□□□ -1.7
TRAPPC11-208ENST00000511955 FREM2Q5SZK8 3169 aa4.43□□□□□ -1.7
TRAPPC11-208ENST00000511955 CEP295Q9C0D2 2601 aa4.43□□□□□ -1.7
TRAPPC11-208ENST00000511955 A0A1W2PR80 420 aa4.43□□□□□ -1.7
TRAPPC11-208ENST00000511955 SMIM9A6NGZ8 99 aa4.43□□□□□ -1.7
TRAPPC11-208ENST00000511955 CXorf49A8MYA2 514 aaPredicted RBP4.43□□□□□ -1.7
TRAPPC11-208ENST00000511955 DCTN6O00399 190 aa4.43□□□□□ -1.7
TRAPPC11-208ENST00000511955 ACOT8O14734 319 aa4.43□□□□□ -1.7
TRAPPC11-208ENST00000511955 KRT33AO76009 404 aa4.43□□□□□ -1.7
TRAPPC11-208ENST00000511955 VENTXO95231 258 aa4.43□□□□□ -1.7
TRAPPC11-208ENST00000511955 GASTP01350 101 aa4.43□□□□□ -1.7
TRAPPC11-208ENST00000511955 ISG15P05161 165 aa4.43□□□□□ -1.7
TRAPPC11-208ENST00000511955 IGHV4-34P06331 123 aa4.43□□□□□ -1.7
TRAPPC11-208ENST00000511955 H2AFB1P0C5Y9 115 aa4.43□□□□□ -1.7
TRAPPC11-208ENST00000511955 LIPCP11150 499 aa4.43□□□□□ -1.7
TRAPPC11-208ENST00000511955 ZNF250P15622 560 aa4.43□□□□□ -1.7
TRAPPC11-208ENST00000511955 CREB1P16220 341 aa4.43□□□□□ -1.7
TRAPPC11-208ENST00000511955 OMGP23515 440 aa4.43□□□□□ -1.7
TRAPPC11-208ENST00000511955 ITGB7P26010 798 aa4.43□□□□□ -1.7
TRAPPC11-208ENST00000511955 GRPRP30550 384 aa4.43□□□□□ -1.7
TRAPPC11-208ENST00000511955 HTR1FP30939 366 aa4.43□□□□□ -1.7
TRAPPC11-208ENST00000511955 EFNB2P52799 333 aa4.43□□□□□ -1.7
TRAPPC11-208ENST00000511955 TCL1AP56279 114 aa4.43□□□□□ -1.7
TRAPPC11-208ENST00000511955 TMEM50BP56557 158 aa4.43□□□□□ -1.7
TRAPPC11-208ENST00000511955 TMPRSS3P57727 454 aa4.43□□□□□ -1.7
TRAPPC11-208ENST00000511955 OR2B8PP59922 312 aa4.43□□□□□ -1.7
TRAPPC11-208ENST00000511955 CDKL1Q00532 357 aa4.43□□□□□ -1.7
TRAPPC11-208ENST00000511955 MS4A2Q01362 244 aa4.43□□□□□ -1.7
TRAPPC11-208ENST00000511955 PRKCDQ05655 676 aa4.43□□□□□ -1.7
TRAPPC11-208ENST00000511955 DUSP2Q05923 314 aa4.43□□□□□ -1.7
TRAPPC11-208ENST00000511955 ZNF616Q08AN1 781 aa4.43□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 84.5 ms