RNA–Protein interactions for RNA: ENST00000511124.1

CLOCK-209, Transcript of clock circadian regulator, humanhuman

TSL 1 (best)

Gene CLOCK, Length 3,932 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLOCK-209ENST00000511124 CCDC103Q8IW40 242 aa2.44□□□□□ -2.02
CLOCK-209ENST00000511124 ZIC4Q8N9L1 334 aa2.44□□□□□ -2.02
CLOCK-209ENST00000511124 OR2T33Q8NG76 320 aa2.44□□□□□ -2.02
CLOCK-209ENST00000511124 LRRC29Q8WV35 223 aa2.44□□□□□ -2.02
CLOCK-209ENST00000511124 RHOVQ96L33 236 aa2.44□□□□□ -2.02
CLOCK-209ENST00000511124 MARK4Q96L34 752 aa2.44□□□□□ -2.02
CLOCK-209ENST00000511124 OR2M2Q96R28 347 aa2.44□□□□□ -2.02
CLOCK-209ENST00000511124 INTS14Q96SY0 518 aa2.44□□□□□ -2.02
CLOCK-209ENST00000511124 ZNF649Q9BS31 505 aa2.44□□□□□ -2.02
CLOCK-209ENST00000511124 THTPAQ9BU02 230 aa2.44□□□□□ -2.02
CLOCK-209ENST00000511124 OR2H1Q9GZK4 316 aa2.44□□□□□ -2.02
CLOCK-209ENST00000511124 CST11Q9H112 138 aa2.44□□□□□ -2.02
CLOCK-209ENST00000511124 STEAP1Q9UHE8 339 aa2.44□□□□□ -2.02
CLOCK-209ENST00000511124 RNF24Q9Y225 148 aa2.44□□□□□ -2.02
CLOCK-209ENST00000511124 DNAJC15Q9Y5T4 150 aa2.44□□□□□ -2.02
CLOCK-209ENST00000511124 USP9XQ93008 2570 aaPredicted RBP2.44□□□□□ -2.02
CLOCK-209ENST00000511124 A0A1W2PR80 420 aa2.43□□□□□ -2.02
CLOCK-209ENST00000511124 MEIOCA2RUB1 952 aa2.43□□□□□ -2.02
CLOCK-209ENST00000511124 LOC110117498-PIK3R3F6TDL0 507 aa2.43□□□□□ -2.02
CLOCK-209ENST00000511124 H0Y980 276 aa2.43□□□□□ -2.02
CLOCK-209ENST00000511124 ETV2O00321 342 aaPredicted RBP2.43□□□□□ -2.02
CLOCK-209ENST00000511124 PLPP2O43688 288 aa2.43□□□□□ -2.02
CLOCK-209ENST00000511124 SNX3O60493 162 aa2.43□□□□□ -2.02
CLOCK-209ENST00000511124 TRMUO75648 421 aaKnown RBP2.43□□□□□ -2.02
CLOCK-209ENST00000511124 NGFP01138 241 aa2.43□□□□□ -2.02
CLOCK-209ENST00000511124 MYL12AP19105 171 aa2.43□□□□□ -2.02
CLOCK-209ENST00000511124 EFNA1P20827 205 aaPredicted RBP2.43□□□□□ -2.02
CLOCK-209ENST00000511124 CBLP22681 906 aa2.43□□□□□ -2.02
CLOCK-209ENST00000511124 HTR1DP28221 377 aa2.43□□□□□ -2.02
CLOCK-209ENST00000511124 PCBP3P57721 371 aaKnown RBP2.43□□□□□ -2.02
CLOCK-209ENST00000511124 RAB25P57735 213 aa2.43□□□□□ -2.02
CLOCK-209ENST00000511124 KRTAP10-9P60411 292 aa2.43□□□□□ -2.02
CLOCK-209ENST00000511124 EIF2B1Q14232 305 aaKnown RBP2.43□□□□□ -2.02
CLOCK-209ENST00000511124 FXNQ16595 210 aa2.43□□□□□ -2.02
CLOCK-209ENST00000511124 MOGAT2Q3SYC2 334 aa2.43□□□□□ -2.02
CLOCK-209ENST00000511124 SLC35D3Q5M8T2 416 aa2.43□□□□□ -2.02
CLOCK-209ENST00000511124 C10orf128Q5T292 105 aa2.43□□□□□ -2.02
CLOCK-209ENST00000511124 BCL2L15Q5TBC7 163 aa2.43□□□□□ -2.02
CLOCK-209ENST00000511124 SLC2A7Q6PXP3 512 aa2.43□□□□□ -2.02
CLOCK-209ENST00000511124 SMARCD3Q6STE5 483 aa2.43□□□□□ -2.02
CLOCK-209ENST00000511124 ATG4DQ86TL0 474 aaPredicted RBP2.43□□□□□ -2.02
CLOCK-209ENST00000511124 MOGAT3Q86VF5 341 aa2.43□□□□□ -2.02
CLOCK-209ENST00000511124 LRRC28Q86X40 367 aaPredicted RBP2.43□□□□□ -2.02
CLOCK-209ENST00000511124 RPRMLQ8N4K4 120 aa2.43□□□□□ -2.02
CLOCK-209ENST00000511124 LINC00482Q8N8I6 264 aa2.43□□□□□ -2.02
CLOCK-209ENST00000511124 ZNF555Q8NEP9 628 aa2.43□□□□□ -2.02
CLOCK-209ENST00000511124 OR5D16Q8NGK9 328 aa2.43□□□□□ -2.02
CLOCK-209ENST00000511124 OR6N2Q8NGY6 317 aa2.43□□□□□ -2.02
CLOCK-209ENST00000511124 ITLN1Q8WWA0 313 aa2.43□□□□□ -2.02
CLOCK-209ENST00000511124 C10orf35Q96D05 121 aa2.43□□□□□ -2.02
CLOCK-209ENST00000511124 GPR78Q96P69 363 aa2.43□□□□□ -2.02
CLOCK-209ENST00000511124 S1PR3Q99500 378 aa2.43□□□□□ -2.02
CLOCK-209ENST00000511124 ZNF251Q9BRH9 671 aa2.43□□□□□ -2.02
CLOCK-209ENST00000511124 SRXN1Q9BYN0 137 aa2.43□□□□□ -2.02
CLOCK-209ENST00000511124 GPATCH2Q9NW75 528 aa2.43□□□□□ -2.02
CLOCK-209ENST00000511124 C1orf123Q9NWV4 160 aa2.43□□□□□ -2.02
CLOCK-209ENST00000511124 PTTG3PQ9NZH4 202 aa2.43□□□□□ -2.02
CLOCK-209ENST00000511124 INSIG2Q9Y5U4 225 aa2.43□□□□□ -2.02
CLOCK-209ENST00000511124 ENPP4Q9Y6X5 453 aa2.43□□□□□ -2.02
CLOCK-209ENST00000511124 SHANK1Q9Y566 2161 aa2.43□□□□□ -2.02
CLOCK-209ENST00000511124 CADP27708 2225 aa2.43□□□□□ -2.02
CLOCK-209ENST00000511124 USF3Q68DE3 2245 aa2.43□□□□□ -2.02
CLOCK-209ENST00000511124 TRAV40A0A0B4J280 105 aa2.43□□□□□ -2.02
CLOCK-209ENST00000511124 IGHV1-69DA0A0B4J2H0 117 aa2.43□□□□□ -2.02
CLOCK-209ENST00000511124 IGHV2-70DA0A0C4DH43 119 aa2.43□□□□□ -2.02
CLOCK-209ENST00000511124 A0A0G2JLM5 398 aa2.43□□□□□ -2.02
CLOCK-209ENST00000511124 TNFRSF11BO00300 401 aa2.43□□□□□ -2.02
CLOCK-209ENST00000511124 IGKV3-15P01624 115 aa2.43□□□□□ -2.02
CLOCK-209ENST00000511124 IGLV1-44P01699 117 aa2.43□□□□□ -2.02
CLOCK-209ENST00000511124 IGHV1-69P01742 117 aa2.43□□□□□ -2.02
CLOCK-209ENST00000511124 IGHV2-5P01817 119 aa2.43□□□□□ -2.02
CLOCK-209ENST00000511124 GKN3PP0CG01 181 aa2.43□□□□□ -2.02
CLOCK-209ENST00000511124 VSIG10L2P0DP72 767 aa2.43□□□□□ -2.02
CLOCK-209ENST00000511124 KITLGP21583 273 aa2.43□□□□□ -2.02
CLOCK-209ENST00000511124 GABRR1P24046 479 aa2.43□□□□□ -2.02
CLOCK-209ENST00000511124 MAPK3P27361 379 aaPredicted RBP2.43□□□□□ -2.02
CLOCK-209ENST00000511124 ETV4P43268 484 aa2.43□□□□□ -2.02
CLOCK-209ENST00000511124 CBX5P45973 191 aa2.43□□□□□ -2.02
CLOCK-209ENST00000511124 COMPP49747 757 aaPredicted RBP2.43□□□□□ -2.02
CLOCK-209ENST00000511124 AQP5P55064 265 aa2.43□□□□□ -2.02
CLOCK-209ENST00000511124 WNT3P56703 355 aa2.43□□□□□ -2.02
CLOCK-209ENST00000511124 MAGOHP61326 146 aaKnown RBP2.43□□□□□ -2.02
CLOCK-209ENST00000511124 ST3GAL4Q11206 333 aa2.43□□□□□ -2.02
CLOCK-209ENST00000511124 AKAP6Q13023 2319 aa2.43□□□□□ -2.02
CLOCK-209ENST00000511124 RAB11BQ15907 218 aa2.43□□□□□ -2.02
CLOCK-209ENST00000511124 KCNMB1Q16558 191 aa2.43□□□□□ -2.02
CLOCK-209ENST00000511124 SYPL1Q16563 259 aa2.43□□□□□ -2.02
CLOCK-209ENST00000511124 ZNF74Q16587 644 aa2.43□□□□□ -2.02
CLOCK-209ENST00000511124 KLHL12Q53G59 568 aa2.43□□□□□ -2.02
CLOCK-209ENST00000511124 CYBRD1Q53TN4 286 aa2.43□□□□□ -2.02
CLOCK-209ENST00000511124 ENTPD8Q5MY95 495 aa2.43□□□□□ -2.02
CLOCK-209ENST00000511124 LEG1Q6P5S2 330 aa2.43□□□□□ -2.02
CLOCK-209ENST00000511124 WDR88Q6ZMY6 472 aa2.43□□□□□ -2.02
CLOCK-209ENST00000511124 MOB3CQ70IA8 216 aa2.43□□□□□ -2.02
CLOCK-209ENST00000511124 SATL1Q86VE3 508 aa2.43□□□□□ -2.02
CLOCK-209ENST00000511124 ZNF227Q86WZ6 799 aa2.43□□□□□ -2.02
CLOCK-209ENST00000511124 CHST4Q8NCG5 386 aa2.43□□□□□ -2.02
CLOCK-209ENST00000511124 OR56B2PQ8NGI1 322 aa2.43□□□□□ -2.02
CLOCK-209ENST00000511124 OR10X1Q8NGY0 326 aa2.43□□□□□ -2.02
CLOCK-209ENST00000511124 PIGCQ92535 297 aa2.43□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms