RNA–Protein interactions for RNA: ENST00000510377.5

USP38-202, Transcript of ubiquitin specific peptidase 38, humanhuman

TSL 1 (best) BASIC

Gene USP38, Length 4,135 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP38-202ENST00000510377 RAET1LQ5VY80 246 aa13.35□□□□□ -0.27
USP38-202ENST00000510377 EXD3Q8N9H8 876 aa13.35□□□□□ -0.27
USP38-202ENST00000510377 SUMF1Q8NBK3 374 aa13.35□□□□□ -0.27
USP38-202ENST00000510377 ASB5Q8WWX0 329 aa13.35□□□□□ -0.27
USP38-202ENST00000510377 AKR1E2Q96JD6 320 aa13.35□□□□□ -0.27
USP38-202ENST00000510377 DEFB126Q9BYW3 111 aa13.35□□□□□ -0.27
USP38-202ENST00000510377 PTGES2Q9H7Z7 377 aa13.35□□□□□ -0.27
USP38-202ENST00000510377 FBRSQ9HAH7 460 aa13.35□□□□□ -0.27
USP38-202ENST00000510377 GPR84Q9NQS5 396 aa13.35□□□□□ -0.27
USP38-202ENST00000510377 SLC2A4RGQ9NR83 387 aa13.35□□□□□ -0.27
USP38-202ENST00000510377 FBXO7Q9Y3I1 522 aa13.35□□□□□ -0.27
USP38-202ENST00000510377 FAM221AA4D161 298 aa13.35□□□□□ -0.27
USP38-202ENST00000510377 STMND1H3BQB6 276 aa13.35□□□□□ -0.27
USP38-202ENST00000510377 BET1O15155 118 aa13.35□□□□□ -0.27
USP38-202ENST00000510377 MTRF1O75570 445 aaKnown RBP13.35□□□□□ -0.27
USP38-202ENST00000510377 MT-ATP6P00846 226 aa13.35□□□□□ -0.27
USP38-202ENST00000510377 FZD5Q13467 585 aa13.35□□□□□ -0.27
USP38-202ENST00000510377 PPA1Q15181 289 aa13.35□□□□□ -0.27
USP38-202ENST00000510377 INPP5JQ15735 1006 aaPredicted RBP13.35□□□□□ -0.27
USP38-202ENST00000510377 C14orf28Q4W4Y0 310 aa13.35□□□□□ -0.27
USP38-202ENST00000510377 SDK2Q58EX2 2172 aa13.35□□□□□ -0.27
USP38-202ENST00000510377 CLEC9AQ6UXN8 241 aa13.35□□□□□ -0.27
USP38-202ENST00000510377 PUSL1Q8N0Z8 303 aaKnown RBP13.35□□□□□ -0.27
USP38-202ENST00000510377 SMCO4Q9NRQ5 59 aa13.35□□□□□ -0.27
USP38-202ENST00000510377 VSIG4Q9Y279 399 aa13.35□□□□□ -0.27
USP38-202ENST00000510377 NPIPA2E9PIF3 369 aa13.34□□□□□ -0.27
USP38-202ENST00000510377 NPIPA3F8WFD2 350 aa13.34□□□□□ -0.27
USP38-202ENST00000510377 MYF5P13349 255 aa13.34□□□□□ -0.27
USP38-202ENST00000510377 DRD1P21728 446 aa13.34□□□□□ -0.27
USP38-202ENST00000510377 H1FNTQ75WM6 255 aaPredicted RBP13.34□□□□□ -0.27
USP38-202ENST00000510377 SHARPINQ9H0F6 387 aa13.34□□□□□ -0.27
USP38-202ENST00000510377 OR10A2Q9H208 303 aa13.34□□□□□ -0.27
USP38-202ENST00000510377 ZNF98A6NK75 572 aa13.34□□□□□ -0.27
USP38-202ENST00000510377 G3V3Y1 287 aa13.34□□□□□ -0.27
USP38-202ENST00000510377 DIRAS3O95661 229 aa13.34□□□□□ -0.27
USP38-202ENST00000510377 IL33O95760 270 aa13.34□□□□□ -0.27
USP38-202ENST00000510377 GP1BAP07359 652 aa13.34□□□□□ -0.27
USP38-202ENST00000510377 FGF2P09038 288 aa13.34□□□□□ -0.27
USP38-202ENST00000510377 NFYBP25208 207 aa13.34□□□□□ -0.27
USP38-202ENST00000510377 OPRM1P35372 400 aa13.34□□□□□ -0.27
USP38-202ENST00000510377 SLC16A13Q7RTY0 426 aa13.34□□□□□ -0.27
USP38-202ENST00000510377 PBOV1Q9GZY1 135 aa13.34□□□□□ -0.27
USP38-202ENST00000510377 EXOSC3Q9NQT5 275 aaKnown RBP13.34□□□□□ -0.27
USP38-202ENST00000510377 UBE2J1Q9Y385 318 aaPredicted RBP13.34□□□□□ -0.27
USP38-202ENST00000510377 TRPM7Q96QT4 1865 aa13.34□□□□□ -0.27
USP38-202ENST00000510377 TRIM77I1YAP6 450 aa13.34□□□□□ -0.27
USP38-202ENST00000510377 SULT2B1O00204 365 aa13.34□□□□□ -0.27
USP38-202ENST00000510377 XRCC2O43543 280 aa13.34□□□□□ -0.27
USP38-202ENST00000510377 HLA-DOBP13765 273 aa13.34□□□□□ -0.27
USP38-202ENST00000510377 TUBG1P23258 451 aa13.34□□□□□ -0.27
USP38-202ENST00000510377 RAB32Q13637 225 aa13.34□□□□□ -0.27
USP38-202ENST00000510377 CPEB2Q7Z5Q1 589 aaKnown RBP13.34□□□□□ -0.27
USP38-202ENST00000510377 TMEM156Q8N614 296 aa13.34□□□□□ -0.27
USP38-202ENST00000510377 TERB2Q8NHR7 220 aa13.34□□□□□ -0.27
USP38-202ENST00000510377 TCTEX1D2Q8WW35 142 aa13.34□□□□□ -0.27
USP38-202ENST00000510377 ROBO4Q8WZ75 1007 aa13.34□□□□□ -0.27
USP38-202ENST00000510377 TM4SF19Q96DZ7 209 aa13.34□□□□□ -0.27
USP38-202ENST00000510377 SPACA1Q9HBV2 294 aa13.34□□□□□ -0.27
USP38-202ENST00000510377 KLK13Q9UKR3 277 aa13.34□□□□□ -0.27
USP38-202ENST00000510377 URGCP-MRPS24S4R325 110 aa13.34□□□□□ -0.27
USP38-202ENST00000510377 RBMXL2O75526 392 aaKnown RBP13.33□□□□□ -0.27
USP38-202ENST00000510377 NXPH3O95157 252 aa13.33□□□□□ -0.27
USP38-202ENST00000510377 HPP00738 406 aa13.33□□□□□ -0.27
USP38-202ENST00000510377 IGHG1P01857 330 aa13.33□□□□□ -0.27
USP38-202ENST00000510377 HYAL1Q12794 435 aa13.33□□□□□ -0.27
USP38-202ENST00000510377 CEBPEQ15744 281 aa13.33□□□□□ -0.27
USP38-202ENST00000510377 ZNF674Q2M3X9 581 aa13.33□□□□□ -0.27
USP38-202ENST00000510377 CHRDQ9H2X0 955 aa13.33□□□□□ -0.27
USP38-202ENST00000510377 WIF1Q9Y5W5 379 aa13.33□□□□□ -0.27
USP38-202ENST00000510377 TCF20Q9UGU0 1960 aaKnown RBP13.33□□□□□ -0.28
USP38-202ENST00000510377 TRBV11-1A0A0K0K1C0 115 aa13.33□□□□□ -0.28
USP38-202ENST00000510377 LCATP04180 440 aa13.33□□□□□ -0.28
USP38-202ENST00000510377 JMJD7P0C870 316 aa13.33□□□□□ -0.28
USP38-202ENST00000510377 ZNF16P17020 682 aaPredicted RBP13.33□□□□□ -0.28
USP38-202ENST00000510377 GLRA1P23415 457 aa13.33□□□□□ -0.28
USP38-202ENST00000510377 FCGR2CP31995 323 aa13.33□□□□□ -0.28
USP38-202ENST00000510377 RAB13P51153 203 aa13.33□□□□□ -0.28
USP38-202ENST00000510377 STPG1Q5TH74 334 aa13.33□□□□□ -0.28
USP38-202ENST00000510377 NAA40Q86UY6 237 aa13.33□□□□□ -0.28
USP38-202ENST00000510377 C11orf40Q8WZ69 217 aa13.33□□□□□ -0.28
USP38-202ENST00000510377 NPTNQ9Y639 398 aa13.33□□□□□ -0.28
USP38-202ENST00000510377 CXCL12P48061 93 aa13.33□□□□□ -0.28
USP38-202ENST00000510377 OGFOD3Q6PK18 319 aa13.33□□□□□ -0.28
USP38-202ENST00000510377 FN3KRPQ9HA64 309 aa13.33□□□□□ -0.28
USP38-202ENST00000510377 H0YIG0 161 aa13.32□□□□□ -0.28
USP38-202ENST00000510377 ABCD4O14678 606 aa13.32□□□□□ -0.28
USP38-202ENST00000510377 LYPD3O95274 346 aa13.32□□□□□ -0.28
USP38-202ENST00000510377 MGAT2Q10469 447 aa13.32□□□□□ -0.28
USP38-202ENST00000510377 TSC22D1Q15714 1073 aa13.32□□□□□ -0.28
USP38-202ENST00000510377 SLC36A1Q7Z2H8 476 aa13.32□□□□□ -0.28
USP38-202ENST00000510377 SLC25A28Q96A46 364 aa13.32□□□□□ -0.28
USP38-202ENST00000510377 PBDC1Q9BVG4 233 aa13.32□□□□□ -0.28
USP38-202ENST00000510377 CNTNAP3Q9BZ76 1288 aa13.32□□□□□ -0.28
USP38-202ENST00000510377 TNFSF18Q9UNG2 199 aa13.32□□□□□ -0.28
USP38-202ENST00000510377 MTCL1Q9Y4B5 1905 aaKnown RBP13.32□□□□□ -0.28
USP38-202ENST00000510377 IGKV1D-42A0A075B6H8 117 aa13.32□□□□□ -0.28
USP38-202ENST00000510377 K7EQS6 105 aa13.32□□□□□ -0.28
USP38-202ENST00000510377 DUX1O43812 170 aa13.32□□□□□ -0.28
USP38-202ENST00000510377 ZNF205O95201 554 aa13.32□□□□□ -0.28
USP38-202ENST00000510377 SFTA3P0C7M3 94 aa13.32□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms