RNA–Protein interactions for RNA: ENST00000510171.3

DDX41-211, Transcript of DEAD-box helicase 41, humanhuman

TSL 3

Gene DDX41, Length 569 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-211ENST00000510171 SOCS2O14508 198 aa8.63□□□□□ -1.03
DDX41-211ENST00000510171 IMPA2O14732 288 aa8.63□□□□□ -1.03
DDX41-211ENST00000510171 FAM20BO75063 409 aa8.63□□□□□ -1.03
DDX41-211ENST00000510171 GADD45GO95257 159 aa8.63□□□□□ -1.03
DDX41-211ENST00000510171 TXNDC12O95881 172 aa8.63□□□□□ -1.03
DDX41-211ENST00000510171 CRABP1P29762 137 aa8.63□□□□□ -1.03
DDX41-211ENST00000510171 IFNGR2P38484 337 aa8.63□□□□□ -1.03
DDX41-211ENST00000510171 CD200P41217 278 aa8.63□□□□□ -1.03
DDX41-211ENST00000510171 CENPAP49450 140 aa8.63□□□□□ -1.03
DDX41-211ENST00000510171 SEC23BQ15437 767 aa8.63□□□□□ -1.03
DDX41-211ENST00000510171 MPPED2Q15777 294 aa8.63□□□□□ -1.03
DDX41-211ENST00000510171 CLEC12AQ5QGZ9 265 aa8.63□□□□□ -1.03
DDX41-211ENST00000510171 CORO6Q6QEF8 472 aa8.63□□□□□ -1.03
DDX41-211ENST00000510171 SMARCD3Q6STE5 483 aa8.63□□□□□ -1.03
DDX41-211ENST00000510171 COLCA1Q6ZS62 124 aa8.63□□□□□ -1.03
DDX41-211ENST00000510171 ZSCAN2Q7Z7L9 614 aaPredicted RBP8.63□□□□□ -1.03
DDX41-211ENST00000510171 PGAM4Q8N0Y7 254 aa8.63□□□□□ -1.03
DDX41-211ENST00000510171 RNF148Q8N7C7 305 aa8.63□□□□□ -1.03
DDX41-211ENST00000510171 FAM86B1Q8N7N1 296 aa8.63□□□□□ -1.03
DDX41-211ENST00000510171 PNLDC1Q8NA58 520 aaKnown RBP8.63□□□□□ -1.03
DDX41-211ENST00000510171 FAM110DQ8TAY7 271 aaPredicted RBP8.63□□□□□ -1.03
DDX41-211ENST00000510171 LHX4Q969G2 390 aa8.63□□□□□ -1.03
DDX41-211ENST00000510171 TBX15Q96SF7 602 aa8.63□□□□□ -1.03
DDX41-211ENST00000510171 FUZQ9BT04 418 aa8.63□□□□□ -1.03
DDX41-211ENST00000510171 NUAK2Q9H093 628 aa8.63□□□□□ -1.03
DDX41-211ENST00000510171 HDHD2Q9H0R4 259 aa8.63□□□□□ -1.03
DDX41-211ENST00000510171 DPAGT1Q9H3H5 408 aa8.63□□□□□ -1.03
DDX41-211ENST00000510171 FN3KRPQ9HA64 309 aa8.63□□□□□ -1.03
DDX41-211ENST00000510171 UFSP2Q9NUQ7 469 aa8.63□□□□□ -1.03
DDX41-211ENST00000510171 F5H5K5 113 aa8.62□□□□□ -1.03
DDX41-211ENST00000510171 LGALS8O00214 317 aa8.62□□□□□ -1.03
DDX41-211ENST00000510171 ADAM20O43506 726 aa8.62□□□□□ -1.03
DDX41-211ENST00000510171 NDUFA2O43678 99 aa8.62□□□□□ -1.03
DDX41-211ENST00000510171 DCTN3O75935 186 aa8.62□□□□□ -1.03
DDX41-211ENST00000510171 DIRAS1O95057 198 aa8.62□□□□□ -1.03
DDX41-211ENST00000510171 TSPAN15O95858 294 aa8.62□□□□□ -1.03
DDX41-211ENST00000510171 IGHV4-59P01825 116 aa8.62□□□□□ -1.03
DDX41-211ENST00000510171 SEMG1P04279 462 aa8.62□□□□□ -1.03
DDX41-211ENST00000510171 SLC6A6P31641 620 aa8.62□□□□□ -1.03
DDX41-211ENST00000510171 IER3P46695 156 aa8.62□□□□□ -1.03
DDX41-211ENST00000510171 MNAT1P51948 309 aa8.62□□□□□ -1.03
DDX41-211ENST00000510171 RAD23AP54725 363 aa8.62□□□□□ -1.03
DDX41-211ENST00000510171 HIST1H3AP68431 136 aa8.62□□□□□ -1.03
DDX41-211ENST00000510171 SPIBQ01892 262 aa8.62□□□□□ -1.03
DDX41-211ENST00000510171 MALLQ13021 153 aa8.62□□□□□ -1.03
DDX41-211ENST00000510171 GK2Q14410 553 aaPredicted RBP8.62□□□□□ -1.03
DDX41-211ENST00000510171 RSPO1Q2MKA7 263 aaPredicted RBP8.62□□□□□ -1.03
DDX41-211ENST00000510171 FBLN7Q53RD9 439 aa8.62□□□□□ -1.03
DDX41-211ENST00000510171 HIST2H3PS2Q5TEC6 136 aa8.62□□□□□ -1.03
DDX41-211ENST00000510171 PRAMEF6Q5VXH4 476 aa8.62□□□□□ -1.03
DDX41-211ENST00000510171 SFRP4Q6FHJ7 346 aaPredicted RBP8.62□□□□□ -1.03
DDX41-211ENST00000510171 C16orf89Q6UX73 402 aa8.62□□□□□ -1.03
DDX41-211ENST00000510171 GDPGP1Q6ZNW5 385 aa8.62□□□□□ -1.03
DDX41-211ENST00000510171 HIST2H3AQ71DI3 136 aa8.62□□□□□ -1.03
DDX41-211ENST00000510171 BOLLQ8N9W6 283 aaKnown RBP8.62□□□□□ -1.03
DDX41-211ENST00000510171 ZSCAN4Q8NAM6 433 aaPredicted RBP8.62□□□□□ -1.03
DDX41-211ENST00000510171 SCCPDHQ8NBX0 429 aa8.62□□□□□ -1.03
DDX41-211ENST00000510171 OR52J3Q8NH60 311 aa8.62□□□□□ -1.03
DDX41-211ENST00000510171 FANK1Q8TC84 345 aa8.62□□□□□ -1.03
DDX41-211ENST00000510171 SPRYD4Q8WW59 207 aaPredicted RBP8.62□□□□□ -1.03
DDX41-211ENST00000510171 NSMCE2Q96MF7 247 aa8.62□□□□□ -1.03
DDX41-211ENST00000510171 SLC22A4Q9H015 551 aa8.62□□□□□ -1.03
DDX41-211ENST00000510171 RASSF4Q9H2L5 321 aa8.62□□□□□ -1.03
DDX41-211ENST00000510171 TRIM36Q9NQ86 728 aa8.62□□□□□ -1.03
DDX41-211ENST00000510171 RNF7Q9UBF6 113 aa8.62□□□□□ -1.03
DDX41-211ENST00000510171 CTSZQ9UBR2 303 aa8.62□□□□□ -1.03
DDX41-211ENST00000510171 TAGLN3Q9UI15 199 aa8.62□□□□□ -1.03
DDX41-211ENST00000510171 ARL2BPQ9Y2Y0 163 aa8.62□□□□□ -1.03
DDX41-211ENST00000510171 NOP16Q9Y3C1 178 aaKnown RBP8.62□□□□□ -1.03
DDX41-211ENST00000510171 IER3IP1Q9Y5U9 82 aa8.62□□□□□ -1.03
DDX41-211ENST00000510171 TRAV38-1A0A0B4J264 116 aa8.61□□□□□ -1.03
DDX41-211ENST00000510171 A0A0U1RQK1 487 aa8.61□□□□□ -1.03
DDX41-211ENST00000510171 C3orf80F5H4A9 247 aa8.61□□□□□ -1.03
DDX41-211ENST00000510171 ARPC2O15144 300 aa8.61□□□□□ -1.03
DDX41-211ENST00000510171 ARPC3O15145 178 aa8.61□□□□□ -1.03
DDX41-211ENST00000510171 IDH3BO43837 385 aa8.61□□□□□ -1.03
DDX41-211ENST00000510171 OR10H3O60404 316 aa8.61□□□□□ -1.03
DDX41-211ENST00000510171 ECDO95905 644 aaPredicted RBP8.61□□□□□ -1.03
DDX41-211ENST00000510171 RENP00797 406 aa8.61□□□□□ -1.03
DDX41-211ENST00000510171 LCATP04180 440 aa8.61□□□□□ -1.03
DDX41-211ENST00000510171 FABP3P05413 133 aa8.61□□□□□ -1.03
DDX41-211ENST00000510171 ACSM4P0C7M7 580 aa8.61□□□□□ -1.03
DDX41-211ENST00000510171 CDKN2AP42771 156 aaKnown RBP8.61□□□□□ -1.03
DDX41-211ENST00000510171 PRSS12P56730 875 aa8.61□□□□□ -1.03
DDX41-211ENST00000510171 FXYD6P3P58550 94 aa8.61□□□□□ -1.03
DDX41-211ENST00000510171 ARF6P62330 175 aa8.61□□□□□ -1.03
DDX41-211ENST00000510171 HOXA4Q00056 320 aaPredicted RBP8.61□□□□□ -1.03
DDX41-211ENST00000510171 ECH1Q13011 328 aa8.61□□□□□ -1.03
DDX41-211ENST00000510171 OR8G1Q15617 311 aa8.61□□□□□ -1.03
DDX41-211ENST00000510171 OR8B8Q15620 311 aa8.61□□□□□ -1.03
DDX41-211ENST00000510171 MEP1BQ16820 701 aa8.61□□□□□ -1.03
DDX41-211ENST00000510171 RFX4Q33E94 735 aa8.61□□□□□ -1.03
DDX41-211ENST00000510171 KRTAP27-1Q3LI81 207 aa8.61□□□□□ -1.03
DDX41-211ENST00000510171 Q6ZSV7 163 aa8.61□□□□□ -1.03
DDX41-211ENST00000510171 PTCHD4Q6ZW05 846 aa8.61□□□□□ -1.03
DDX41-211ENST00000510171 PGAP1Q75T13 922 aa8.61□□□□□ -1.03
DDX41-211ENST00000510171 NAA40Q86UY6 237 aa8.61□□□□□ -1.03
DDX41-211ENST00000510171 LDLRAD3Q86YD5 345 aa8.61□□□□□ -1.03
DDX41-211ENST00000510171 LRTOMTQ8WZ04 291 aa8.61□□□□□ -1.03
DDX41-211ENST00000510171 SLCO4A1Q96BD0 722 aa8.61□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms