RNA–Protein interactions for RNA: ENST00000509409.5

TPM3-219, Transcript of tropomyosin 3, humanhuman

TSL 2

Gene TPM3, Length 1,248 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-219ENST00000509409 OR2T4Q8NH00 348 aa12.85□□□□□ -0.35
TPM3-219ENST00000509409 ZDHHC16Q969W1 377 aa12.85□□□□□ -0.35
TPM3-219ENST00000509409 MAP6Q96JE9 813 aa12.85□□□□□ -0.35
TPM3-219ENST00000509409 SLC22A4Q9H015 551 aa12.85□□□□□ -0.35
TPM3-219ENST00000509409 MMADHCQ9H3L0 296 aaPredicted RBP12.85□□□□□ -0.35
TPM3-219ENST00000509409 FN3KRPQ9HA64 309 aa12.85□□□□□ -0.35
TPM3-219ENST00000509409 CENPMQ9NSP4 180 aa12.85□□□□□ -0.35
TPM3-219ENST00000509409 ARL8BQ9NVJ2 186 aa12.85□□□□□ -0.35
TPM3-219ENST00000509409 RNF7Q9UBF6 113 aa12.85□□□□□ -0.35
TPM3-219ENST00000509409 SOX21Q9Y651 276 aaPredicted RBP12.85□□□□□ -0.35
TPM3-219ENST00000509409 CDH10Q9Y6N8 788 aa12.85□□□□□ -0.35
TPM3-219ENST00000509409 A0A1B0GWJ7 208 aa12.84□□□□□ -0.35
TPM3-219ENST00000509409 ATP8B1O43520 1251 aa12.84□□□□□ -0.35
TPM3-219ENST00000509409 CCNB2O95067 398 aa12.84□□□□□ -0.35
TPM3-219ENST00000509409 FSTL3O95633 263 aa12.84□□□□□ -0.35
TPM3-219ENST00000509409 GASTP01350 101 aa12.84□□□□□ -0.35
TPM3-219ENST00000509409 PRKXP51817 358 aa12.84□□□□□ -0.35
TPM3-219ENST00000509409 ZNF92Q03936 586 aa12.84□□□□□ -0.35
TPM3-219ENST00000509409 SLC9A3R2Q15599 337 aa12.84□□□□□ -0.35
TPM3-219ENST00000509409 MPPED2Q15777 294 aa12.84□□□□□ -0.35
TPM3-219ENST00000509409 KCNJ8Q15842 424 aa12.84□□□□□ -0.35
TPM3-219ENST00000509409 WDR25Q64LD2 544 aaPredicted RBP12.84□□□□□ -0.35
TPM3-219ENST00000509409 SFRP4Q6FHJ7 346 aaPredicted RBP12.84□□□□□ -0.35
TPM3-219ENST00000509409 SHISA2Q6UWI4 295 aa12.84□□□□□ -0.35
TPM3-219ENST00000509409 CYP2R1Q6VVX0 501 aa12.84□□□□□ -0.35
TPM3-219ENST00000509409 DCXRQ7Z4W1 244 aa12.84□□□□□ -0.35
TPM3-219ENST00000509409 OR4C15Q8NGM1 316 aa12.84□□□□□ -0.35
TPM3-219ENST00000509409 Q8TCH9 128 aa12.84□□□□□ -0.35
TPM3-219ENST00000509409 UPRTQ96BW1 309 aa12.84□□□□□ -0.35
TPM3-219ENST00000509409 C1orf147Q96MC9 270 aaPredicted RBP12.84□□□□□ -0.35
TPM3-219ENST00000509409 TECTBQ96PL2 329 aa12.84□□□□□ -0.35
TPM3-219ENST00000509409 COPS4Q9BT78 406 aa12.84□□□□□ -0.35
TPM3-219ENST00000509409 ADAT1Q9BUB4 502 aaKnown RBP12.84□□□□□ -0.35
TPM3-219ENST00000509409 NDE1Q9NXR1 346 aa12.84□□□□□ -0.35
TPM3-219ENST00000509409 ERVK-18Q9QC07 812 aa12.84□□□□□ -0.35
TPM3-219ENST00000509409 TRAV40A0A0B4J280 105 aa12.83□□□□□ -0.36
TPM3-219ENST00000509409 C3orf80F5H4A9 247 aa12.83□□□□□ -0.36
TPM3-219ENST00000509409 BHLHE40O14503 412 aa12.83□□□□□ -0.36
TPM3-219ENST00000509409 GMDSO60547 372 aa12.83□□□□□ -0.36
TPM3-219ENST00000509409 GRPP07492 148 aa12.83□□□□□ -0.36
TPM3-219ENST00000509409 RNASE1P07998 156 aaKnown RBP12.83□□□□□ -0.36
TPM3-219ENST00000509409 SPARCP09486 303 aa12.83□□□□□ -0.36
TPM3-219ENST00000509409 FMO3P31513 532 aa12.83□□□□□ -0.36
TPM3-219ENST00000509409 HMGA2P52926 109 aa12.83□□□□□ -0.36
TPM3-219ENST00000509409 FGF12P61328 243 aa12.83□□□□□ -0.36
TPM3-219ENST00000509409 OR8B8Q15620 311 aa12.83□□□□□ -0.36
TPM3-219ENST00000509409 TUSC1Q2TAM9 212 aa12.83□□□□□ -0.36
TPM3-219ENST00000509409 SNAI3Q3KNW1 292 aa12.83□□□□□ -0.36
TPM3-219ENST00000509409 DRAM2Q6UX65 266 aa12.83□□□□□ -0.36
TPM3-219ENST00000509409 LNX2Q8N448 690 aa12.83□□□□□ -0.36
TPM3-219ENST00000509409 FITM2Q8N6M3 262 aa12.83□□□□□ -0.36
TPM3-219ENST00000509409 SLC37A3Q8NCC5 494 aa12.83□□□□□ -0.36
TPM3-219ENST00000509409 OR10S1Q8NGN2 331 aa12.83□□□□□ -0.36
TPM3-219ENST00000509409 OR9Q1Q8NGQ5 310 aa12.83□□□□□ -0.36
TPM3-219ENST00000509409 OR2AE1Q8NHA4 323 aa12.83□□□□□ -0.36
TPM3-219ENST00000509409 ZNRF4Q8WWF5 429 aa12.83□□□□□ -0.36
TPM3-219ENST00000509409 TSSK6Q9BXA6 273 aa12.83□□□□□ -0.36
TPM3-219ENST00000509409 UNKLQ9H9P5 680 aaKnown RBP12.83□□□□□ -0.36
TPM3-219ENST00000509409 TBC1D23Q9NUY8 699 aa12.83□□□□□ -0.36
TPM3-219ENST00000509409 ARL2BPQ9Y2Y0 163 aa12.83□□□□□ -0.36
TPM3-219ENST00000509409 LYVE1Q9Y5Y7 322 aa12.83□□□□□ -0.36
TPM3-219ENST00000509409 ZNF593O00488 134 aaPredicted RBP12.82□□□□□ -0.36
TPM3-219ENST00000509409 PHYHO14832 338 aa12.82□□□□□ -0.36
TPM3-219ENST00000509409 ENSAO43768 121 aaKnown RBP12.82□□□□□ -0.36
TPM3-219ENST00000509409 DCTN3O75935 186 aa12.82□□□□□ -0.36
TPM3-219ENST00000509409 NPY4RP50391 375 aa12.82□□□□□ -0.36
TPM3-219ENST00000509409 IL13RA1P78552 427 aa12.82□□□□□ -0.36
TPM3-219ENST00000509409 MZT1Q08AG7 82 aa12.82□□□□□ -0.36
TPM3-219ENST00000509409 PPP1R8Q12972 351 aaKnown RBP12.82□□□□□ -0.36
TPM3-219ENST00000509409 SPATS1Q496A3 300 aa12.82□□□□□ -0.36
TPM3-219ENST00000509409 GLYATL3Q5SZD4 288 aa12.82□□□□□ -0.36
TPM3-219ENST00000509409 GPR157Q5UAW9 335 aa12.82□□□□□ -0.36
TPM3-219ENST00000509409 CD276Q5ZPR3 534 aa12.82□□□□□ -0.36
TPM3-219ENST00000509409 C16orf87Q6PH81 154 aa12.82□□□□□ -0.36
TPM3-219ENST00000509409 LYPD4Q6UWN0 246 aa12.82□□□□□ -0.36
TPM3-219ENST00000509409 ZNF841Q6ZN19 808 aa12.82□□□□□ -0.36
TPM3-219ENST00000509409 RASSF6Q6ZTQ3 369 aa12.82□□□□□ -0.36
TPM3-219ENST00000509409 C9orf139Q6ZV77 190 aa12.82□□□□□ -0.36
TPM3-219ENST00000509409 SPATC1Q76KD6 591 aa12.82□□□□□ -0.36
TPM3-219ENST00000509409 SPERTQ8NA61 448 aa12.82□□□□□ -0.36
TPM3-219ENST00000509409 DDOQ99489 341 aa12.82□□□□□ -0.36
TPM3-219ENST00000509409 BTBD10Q9BSF8 475 aa12.82□□□□□ -0.36
TPM3-219ENST00000509409 PCGF1Q9BSM1 259 aa12.82□□□□□ -0.36
TPM3-219ENST00000509409 TRIM15Q9C019 465 aa12.82□□□□□ -0.36
TPM3-219ENST00000509409 TNFRSF19Q9NS68 423 aa12.82□□□□□ -0.36
TPM3-219ENST00000509409 C1orf123Q9NWV4 160 aa12.82□□□□□ -0.36
TPM3-219ENST00000509409 IL20Q9NYY1 176 aa12.82□□□□□ -0.36
TPM3-219ENST00000509409 KIF17Q9P2E2 1029 aa12.82□□□□□ -0.36
TPM3-219ENST00000509409 TRAV38-1A0A0B4J264 116 aa12.81□□□□□ -0.36
TPM3-219ENST00000509409 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP12.81□□□□□ -0.36
TPM3-219ENST00000509409 MDFIC2A0A1B0GVS7 189 aa12.81□□□□□ -0.36
TPM3-219ENST00000509409 hCG_1807616A0A1W2PRN6 198 aa12.81□□□□□ -0.36
TPM3-219ENST00000509409 A6NLC8 198 aa12.81□□□□□ -0.36
TPM3-219ENST00000509409 CLDN34H7C241 214 aa12.81□□□□□ -0.36
TPM3-219ENST00000509409 LGALS8O00214 317 aa12.81□□□□□ -0.36
TPM3-219ENST00000509409 TMPRSS2O15393 492 aa12.81□□□□□ -0.36
TPM3-219ENST00000509409 TBX1O43435 398 aa12.81□□□□□ -0.36
TPM3-219ENST00000509409 ADAM20O43506 726 aa12.81□□□□□ -0.36
TPM3-219ENST00000509409 PLATP00750 562 aa12.81□□□□□ -0.36
TPM3-219ENST00000509409 GYPBP06028 91 aa12.81□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms