RNA–Protein interactions for RNA: ENST00000509268.1

XRCC4-204, Transcript of X-ray repair cross complementing 4, humanhuman

TSL 2

Gene XRCC4, Length 1,567 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC4-204ENST00000509268 JPT2Q9H910 190 aa1.48□□□□□ -2.17
XRCC4-204ENST00000509268 GNB4Q9HAV0 340 aa1.48□□□□□ -2.17
XRCC4-204ENST00000509268 TMBIM4Q9HC24 238 aa1.48□□□□□ -2.17
XRCC4-204ENST00000509268 KCNJ16Q9NPI9 418 aa1.48□□□□□ -2.17
XRCC4-204ENST00000509268 ACOT13Q9NPJ3 140 aa1.48□□□□□ -2.17
XRCC4-204ENST00000509268 TMEM9BQ9NQ34 198 aa1.48□□□□□ -2.17
XRCC4-204ENST00000509268 FBXO8Q9NRD0 319 aa1.48□□□□□ -2.17
XRCC4-204ENST00000509268 EXD2Q9NVH0 621 aa1.48□□□□□ -2.17
XRCC4-204ENST00000509268 PLEKHJ1Q9NW61 149 aa1.48□□□□□ -2.17
XRCC4-204ENST00000509268 SDHAF2Q9NX18 166 aa1.48□□□□□ -2.17
XRCC4-204ENST00000509268 TREM2Q9NZC2 230 aa1.48□□□□□ -2.17
XRCC4-204ENST00000509268 DHRS4-AS1Q9P1J3 65 aa1.48□□□□□ -2.17
XRCC4-204ENST00000509268 XCL2Q9UBD3 114 aa1.48□□□□□ -2.17
XRCC4-204ENST00000509268 BTNL2Q9UIR0 455 aa1.48□□□□□ -2.17
XRCC4-204ENST00000509268 VSIG4Q9Y279 399 aa1.48□□□□□ -2.17
XRCC4-204ENST00000509268 TBL2Q9Y4P3 447 aaKnown RBP1.48□□□□□ -2.17
XRCC4-204ENST00000509268 UGT2A1Q9Y4X1 527 aa1.48□□□□□ -2.17
XRCC4-204ENST00000509268 LRRC42Q9Y546 428 aa1.48□□□□□ -2.17
XRCC4-204ENST00000509268 OR51B2Q9Y5P1 312 aa1.48□□□□□ -2.17
XRCC4-204ENST00000509268 USP42Q9H9J4 1324 aaKnown RBP1.48□□□□□ -2.17
XRCC4-204ENST00000509268 FANCIQ9NVI1 1328 aa1.48□□□□□ -2.17
XRCC4-204ENST00000509268 TRAV9-2A0A087WT02 112 aa1.47□□□□□ -2.17
XRCC4-204ENST00000509268 KIR2DS1A0A191URI9 304 aa1.47□□□□□ -2.17
XRCC4-204ENST00000509268 A6NDN8 102 aa1.47□□□□□ -2.17
XRCC4-204ENST00000509268 E9PAM4 449 aa1.47□□□□□ -2.17
XRCC4-204ENST00000509268 AGPAT2O15120 278 aa1.47□□□□□ -2.17
XRCC4-204ENST00000509268 FGF16O43320 207 aa1.47□□□□□ -2.17
XRCC4-204ENST00000509268 ATP8B1O43520 1251 aa1.47□□□□□ -2.17
XRCC4-204ENST00000509268 CYTH3O43739 400 aa1.47□□□□□ -2.17
XRCC4-204ENST00000509268 MPZL2O60487 215 aa1.47□□□□□ -2.17
XRCC4-204ENST00000509268 OR5F1O95221 314 aa1.47□□□□□ -2.17
XRCC4-204ENST00000509268 MPZL1O95297 269 aa1.47□□□□□ -2.17
XRCC4-204ENST00000509268 DEXIO95424 95 aa1.47□□□□□ -2.17
XRCC4-204ENST00000509268 HPRT1P00492 218 aa1.47□□□□□ -2.17
XRCC4-204ENST00000509268 CD8AP01732 235 aa1.47□□□□□ -2.17
XRCC4-204ENST00000509268 PET100P0DJ07 73 aa1.47□□□□□ -2.17
XRCC4-204ENST00000509268 CALM1P0DP23 149 aa1.47□□□□□ -2.17
XRCC4-204ENST00000509268 CALM2P0DP24 149 aa1.47□□□□□ -2.17
XRCC4-204ENST00000509268 CALM3P0DP25 149 aa1.47□□□□□ -2.17
XRCC4-204ENST00000509268 COX5BP10606 129 aa1.47□□□□□ -2.17
XRCC4-204ENST00000509268 HSPD1P10809 573 aaKnown RBP1.47□□□□□ -2.17
XRCC4-204ENST00000509268 GGT1P19440 569 aa1.47□□□□□ -2.17
XRCC4-204ENST00000509268 KLK2P20151 261 aa1.47□□□□□ -2.17
XRCC4-204ENST00000509268 RAB5AP20339 215 aa1.47□□□□□ -2.17
XRCC4-204ENST00000509268 SERPINB5P36952 375 aa1.47□□□□□ -2.17
XRCC4-204ENST00000509268 ACTR1BP42025 376 aa1.47□□□□□ -2.17
XRCC4-204ENST00000509268 CDKN2CP42773 168 aa1.47□□□□□ -2.17
XRCC4-204ENST00000509268 GLP1RP43220 463 aa1.47□□□□□ -2.17
XRCC4-204ENST00000509268 MAGEA2P43356 314 aa1.47□□□□□ -2.17
XRCC4-204ENST00000509268 GALR1P47211 349 aa1.47□□□□□ -2.17
XRCC4-204ENST00000509268 TGM4P49221 684 aa1.47□□□□□ -2.17
XRCC4-204ENST00000509268 B2MP61769 119 aa1.47□□□□□ -2.17
XRCC4-204ENST00000509268 SELENOTP62341 195 aa1.47□□□□□ -2.17
XRCC4-204ENST00000509268 PRKCDQ05655 676 aa1.47□□□□□ -2.17
XRCC4-204ENST00000509268 TWF1Q12792 350 aa1.47□□□□□ -2.17
XRCC4-204ENST00000509268 RAB31Q13636 194 aa1.47□□□□□ -2.17
XRCC4-204ENST00000509268 TFDP2Q14188 446 aa1.47□□□□□ -2.17
XRCC4-204ENST00000509268 KIR2DS1Q14954 304 aa1.47□□□□□ -2.17
XRCC4-204ENST00000509268 ATP6AP1Q15904 470 aa1.47□□□□□ -2.17
XRCC4-204ENST00000509268 LRRC36Q1X8D7 754 aa1.47□□□□□ -2.17
XRCC4-204ENST00000509268 GOLGA7BQ2TAP0 167 aa1.47□□□□□ -2.17
XRCC4-204ENST00000509268 BSXQ3C1V8 233 aa1.47□□□□□ -2.17
XRCC4-204ENST00000509268 PIGGQ5H8A4 983 aa1.47□□□□□ -2.17
XRCC4-204ENST00000509268 TMEM31Q5JXX7 168 aa1.47□□□□□ -2.17
XRCC4-204ENST00000509268 IDNKQ5T6J7 187 aa1.47□□□□□ -2.17
XRCC4-204ENST00000509268 FAM27D1Q5T7N8 215 aa1.47□□□□□ -2.17
XRCC4-204ENST00000509268 RESP18Q5W5W9 173 aa1.47□□□□□ -2.17
XRCC4-204ENST00000509268 RWDD4Q6NW29 188 aaKnown RBP1.47□□□□□ -2.17
XRCC4-204ENST00000509268 WDR74Q6RFH5 385 aaPredicted RBP1.47□□□□□ -2.17
XRCC4-204ENST00000509268 NPSR1Q6W5P4 371 aa1.47□□□□□ -2.17
XRCC4-204ENST00000509268 FAM220AQ7Z4H9 259 aa1.47□□□□□ -2.17
XRCC4-204ENST00000509268 THOC6Q86W42 341 aaKnown RBP1.47□□□□□ -2.17
XRCC4-204ENST00000509268 HIPK1Q86Z02 1210 aa1.47□□□□□ -2.17
XRCC4-204ENST00000509268 NAXDQ8IW45 347 aa1.47□□□□□ -2.17
XRCC4-204ENST00000509268 ENTHD1Q8IYW4 607 aa1.47□□□□□ -2.17
XRCC4-204ENST00000509268 CA13Q8N1Q1 262 aa1.47□□□□□ -2.17
XRCC4-204ENST00000509268 PNKDQ8N490 385 aa1.47□□□□□ -2.17
XRCC4-204ENST00000509268 CSNK1G2-AS1Q8NCQ2 148 aa1.47□□□□□ -2.17
XRCC4-204ENST00000509268 KLHL30-AS1Q8NEE0 82 aa1.47□□□□□ -2.17
XRCC4-204ENST00000509268 LFNGQ8NES3 379 aa1.47□□□□□ -2.17
XRCC4-204ENST00000509268 OR10W1Q8NGF6 305 aa1.47□□□□□ -2.17
XRCC4-204ENST00000509268 OR52E2Q8NGJ4 325 aa1.47□□□□□ -2.17
XRCC4-204ENST00000509268 OR51G1Q8NGK1 321 aa1.47□□□□□ -2.17
XRCC4-204ENST00000509268 OR9G1Q8NH87 305 aa1.47□□□□□ -2.17
XRCC4-204ENST00000509268 SFXN5Q8TD22 340 aa1.47□□□□□ -2.17
XRCC4-204ENST00000509268 VN1R17PQ8TDU5 208 aa1.47□□□□□ -2.17
XRCC4-204ENST00000509268 ITLN1Q8WWA0 313 aa1.47□□□□□ -2.17
XRCC4-204ENST00000509268 TMEM234Q8WY98 164 aa1.47□□□□□ -2.17
XRCC4-204ENST00000509268 FGGYQ96C11 551 aa1.47□□□□□ -2.17
XRCC4-204ENST00000509268 YIPF6Q96EC8 236 aa1.47□□□□□ -2.17
XRCC4-204ENST00000509268 DNAJC1Q96KC8 554 aaKnown RBP1.47□□□□□ -2.17
XRCC4-204ENST00000509268 RNF145Q96MT1 663 aa1.47□□□□□ -2.17
XRCC4-204ENST00000509268 HIST1H4GQ99525 98 aa1.47□□□□□ -2.17
XRCC4-204ENST00000509268 TSNAXQ99598 290 aaKnown RBP1.47□□□□□ -2.17
XRCC4-204ENST00000509268 TSG101Q99816 390 aa1.47□□□□□ -2.17
XRCC4-204ENST00000509268 RASL11BQ9BPW5 248 aa1.47□□□□□ -2.17
XRCC4-204ENST00000509268 NICN1Q9BSH3 213 aa1.47□□□□□ -2.17
XRCC4-204ENST00000509268 DCUN1D5Q9BTE7 237 aa1.47□□□□□ -2.17
XRCC4-204ENST00000509268 DERL2Q9GZP9 239 aa1.47□□□□□ -2.17
XRCC4-204ENST00000509268 PORCNQ9H237 461 aa1.47□□□□□ -2.17
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms