RNA–Protein interactions for RNA: ENST00000508546.5

NEDD9-211, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

TSL 5

Gene NEDD9, Length 581 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-211ENST00000508546 VMACQ2NL98 169 aa7.71□□□□□ -1.18
NEDD9-211ENST00000508546 DNAL1Q4LDG9 190 aa7.71□□□□□ -1.18
NEDD9-211ENST00000508546 OXLD1Q5BKU9 147 aa7.71□□□□□ -1.18
NEDD9-211ENST00000508546 HIST2H3PS2Q5TEC6 136 aa7.71□□□□□ -1.18
NEDD9-211ENST00000508546 PRAMEF6Q5VXH4 476 aa7.71□□□□□ -1.18
NEDD9-211ENST00000508546 SFRP4Q6FHJ7 346 aaPredicted RBP7.71□□□□□ -1.18
NEDD9-211ENST00000508546 HIST2H3AQ71DI3 136 aa7.71□□□□□ -1.18
NEDD9-211ENST00000508546 BTN2A1Q7KYR7 527 aa7.71□□□□□ -1.18
NEDD9-211ENST00000508546 VMO1Q7Z5L0 202 aa7.71□□□□□ -1.18
NEDD9-211ENST00000508546 DHDDSQ86SQ9 333 aa7.71□□□□□ -1.18
NEDD9-211ENST00000508546 PLPP7Q8NBV4 271 aa7.71□□□□□ -1.18
NEDD9-211ENST00000508546 OR51A7Q8NH64 312 aa7.71□□□□□ -1.18
NEDD9-211ENST00000508546 RP9Q8TA86 221 aaKnown RBP7.71□□□□□ -1.18
NEDD9-211ENST00000508546 SGCDQ92629 289 aa7.71□□□□□ -1.18
NEDD9-211ENST00000508546 COQ7Q99807 217 aa7.71□□□□□ -1.18
NEDD9-211ENST00000508546 BTBD10Q9BSF8 475 aa7.71□□□□□ -1.18
NEDD9-211ENST00000508546 HDHD2Q9H0R4 259 aa7.71□□□□□ -1.18
NEDD9-211ENST00000508546 FN3KRPQ9HA64 309 aa7.71□□□□□ -1.18
NEDD9-211ENST00000508546 UFSP2Q9NUQ7 469 aa7.71□□□□□ -1.18
NEDD9-211ENST00000508546 KAAG1Q9UBP8 84 aa7.71□□□□□ -1.18
NEDD9-211ENST00000508546 GRHPRQ9UBQ7 328 aa7.71□□□□□ -1.18
NEDD9-211ENST00000508546 RPUSD1Q9UJJ7 312 aaKnown RBP7.71□□□□□ -1.18
NEDD9-211ENST00000508546 BAG5Q9UL15 447 aa7.71□□□□□ -1.18
NEDD9-211ENST00000508546 NOP16Q9Y3C1 178 aaKnown RBP7.71□□□□□ -1.18
NEDD9-211ENST00000508546 TRAV27A0A087WT01 109 aa7.7□□□□□ -1.18
NEDD9-211ENST00000508546 OOEPA6NGQ2 149 aa7.7□□□□□ -1.18
NEDD9-211ENST00000508546 B2RBV5 119 aa7.7□□□□□ -1.18
NEDD9-211ENST00000508546 XKRYO14609 159 aa7.7□□□□□ -1.18
NEDD9-211ENST00000508546 DVL1O14640 695 aa7.7□□□□□ -1.18
NEDD9-211ENST00000508546 CD14P08571 375 aa7.7□□□□□ -1.18
NEDD9-211ENST00000508546 TNFRSF1BP20333 461 aa7.7□□□□□ -1.18
NEDD9-211ENST00000508546 EEF1B2P24534 225 aaKnown RBP7.7□□□□□ -1.18
NEDD9-211ENST00000508546 SLC9A3P48764 834 aa7.7□□□□□ -1.18
NEDD9-211ENST00000508546 GZMMP51124 257 aa7.7□□□□□ -1.18
NEDD9-211ENST00000508546 HOXA4Q00056 320 aaPredicted RBP7.7□□□□□ -1.18
NEDD9-211ENST00000508546 DBPQ10586 325 aaPredicted RBP7.7□□□□□ -1.18
NEDD9-211ENST00000508546 ST3GAL3Q11203 375 aa7.7□□□□□ -1.18
NEDD9-211ENST00000508546 GK2Q14410 553 aaPredicted RBP7.7□□□□□ -1.18
NEDD9-211ENST00000508546 OR8B8Q15620 311 aa7.7□□□□□ -1.18
NEDD9-211ENST00000508546 KCNMB1Q16558 191 aa7.7□□□□□ -1.18
NEDD9-211ENST00000508546 RSPO1Q2MKA7 263 aaPredicted RBP7.7□□□□□ -1.18
NEDD9-211ENST00000508546 MESTQ5EB52 335 aa7.7□□□□□ -1.18
NEDD9-211ENST00000508546 FAM122BQ7Z309 247 aa7.7□□□□□ -1.18
NEDD9-211ENST00000508546 OAFQ86UD1 273 aa7.7□□□□□ -1.18
NEDD9-211ENST00000508546 GLB1L2Q8IW92 636 aa7.7□□□□□ -1.18
NEDD9-211ENST00000508546 PDZD9Q8IXQ8 264 aa7.7□□□□□ -1.18
NEDD9-211ENST00000508546 ARHGAP24Q8N264 748 aa7.7□□□□□ -1.18
NEDD9-211ENST00000508546 LY6G5BQ8NDX9 201 aa7.7□□□□□ -1.18
NEDD9-211ENST00000508546 GJC3Q8NFK1 279 aa7.7□□□□□ -1.18
NEDD9-211ENST00000508546 OR4S1Q8NGB4 309 aa7.7□□□□□ -1.18
NEDD9-211ENST00000508546 OR10A6Q8NH74 314 aa7.7□□□□□ -1.18
NEDD9-211ENST00000508546 MCUR1Q96AQ8 359 aa7.7□□□□□ -1.18
NEDD9-211ENST00000508546 PHF21AQ96BD5 680 aa7.7□□□□□ -1.18
NEDD9-211ENST00000508546 Q96M85 177 aa7.7□□□□□ -1.18
NEDD9-211ENST00000508546 SLC22A4Q9H015 551 aa7.7□□□□□ -1.18
NEDD9-211ENST00000508546 C1orf21Q9H246 121 aa7.7□□□□□ -1.18
NEDD9-211ENST00000508546 SEMA6AQ9H2E6 1030 aa7.7□□□□□ -1.18
NEDD9-211ENST00000508546 PPA2Q9H2U2 334 aa7.7□□□□□ -1.18
NEDD9-211ENST00000508546 WDR76Q9H967 626 aa7.7□□□□□ -1.18
NEDD9-211ENST00000508546 TAS2R1Q9NYW7 299 aa7.7□□□□□ -1.18
NEDD9-211ENST00000508546 FOXJ3Q9UPW0 622 aa7.7□□□□□ -1.18
NEDD9-211ENST00000508546 ADAM18Q9Y3Q7 739 aa7.7□□□□□ -1.18
NEDD9-211ENST00000508546 BBIP1A8MTZ0 92 aa7.69□□□□□ -1.18
NEDD9-211ENST00000508546 NPFFO15130 113 aa7.69□□□□□ -1.18
NEDD9-211ENST00000508546 KHDRBS3O75525 346 aaKnown RBP7.69□□□□□ -1.18
NEDD9-211ENST00000508546 GYPAP02724 150 aa7.69□□□□□ -1.18
NEDD9-211ENST00000508546 OR1E2P47887 323 aa7.69□□□□□ -1.18
NEDD9-211ENST00000508546 NUDT2P50583 147 aa7.69□□□□□ -1.18
NEDD9-211ENST00000508546 EMX1Q04741 257 aaPredicted RBP7.69□□□□□ -1.18
NEDD9-211ENST00000508546 PRKCDQ05655 676 aa7.69□□□□□ -1.18
NEDD9-211ENST00000508546 OR8G1Q15617 311 aa7.69□□□□□ -1.18
NEDD9-211ENST00000508546 KRTAP27-1Q3LI81 207 aa7.69□□□□□ -1.18
NEDD9-211ENST00000508546 PGM2L1Q6PCE3 622 aa7.69□□□□□ -1.18
NEDD9-211ENST00000508546 C1orf122Q6ZSJ8 110 aa7.69□□□□□ -1.18
NEDD9-211ENST00000508546 CALHM3Q86XJ0 350 aa7.69□□□□□ -1.18
NEDD9-211ENST00000508546 FAM90A1Q86YD7 464 aa7.69□□□□□ -1.18
NEDD9-211ENST00000508546 NRMQ8IXM6 262 aa7.69□□□□□ -1.18
NEDD9-211ENST00000508546 MICU2Q8IYU8 434 aa7.69□□□□□ -1.18
NEDD9-211ENST00000508546 CMTM4Q8IZR5 234 aa7.69□□□□□ -1.18
NEDD9-211ENST00000508546 KLHDC1Q8N7A1 406 aa7.69□□□□□ -1.18
NEDD9-211ENST00000508546 DTX3Q8N9I9 347 aa7.69□□□□□ -1.18
NEDD9-211ENST00000508546 UTP4Q969X6 686 aaKnown RBP7.69□□□□□ -1.18
NEDD9-211ENST00000508546 RCN3Q96D15 328 aa7.69□□□□□ -1.18
NEDD9-211ENST00000508546 PRRC1Q96M27 445 aa7.69□□□□□ -1.18
NEDD9-211ENST00000508546 ZNF570Q96NI8 536 aa7.69□□□□□ -1.18
NEDD9-211ENST00000508546 CADM1Q9BY67 442 aaKnown RBP7.69□□□□□ -1.18
NEDD9-211ENST00000508546 RANBP3Q9H6Z4 567 aaPredicted RBP7.69□□□□□ -1.18
NEDD9-211ENST00000508546 NDE1Q9NXR1 346 aa7.69□□□□□ -1.18
NEDD9-211ENST00000508546 GAR1Q9NY12 217 aaKnown RBP7.69□□□□□ -1.18
NEDD9-211ENST00000508546 A4GNTQ9UNA3 340 aa7.69□□□□□ -1.18
NEDD9-211ENST00000508546 COA3Q9Y2R0 106 aaPredicted RBP7.69□□□□□ -1.18
NEDD9-211ENST00000508546 NDUFAF1Q9Y375 327 aa7.69□□□□□ -1.18
NEDD9-211ENST00000508546 HERC2O95714 4834 aa7.69□□□□□ -1.18
NEDD9-211ENST00000508546 EFCAB9A8MZ26 197 aa7.68□□□□□ -1.18
NEDD9-211ENST00000508546 MRASO14807 208 aa7.68□□□□□ -1.18
NEDD9-211ENST00000508546 ANGPT2O15123 496 aa7.68□□□□□ -1.18
NEDD9-211ENST00000508546 GSC2O15499 205 aa7.68□□□□□ -1.18
NEDD9-211ENST00000508546 GMDSO60547 372 aa7.68□□□□□ -1.18
NEDD9-211ENST00000508546 SLC16A7O60669 478 aa7.68□□□□□ -1.18
NEDD9-211ENST00000508546 PAHP00439 452 aa7.68□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms