RNA–Protein interactions for RNA: ENST00000508500.1

LMNA-222, Transcript of lamin A/C, humanhuman

TSL 1 (best)

Gene LMNA, Length 848 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-222ENST00000508500 IL20Q9NYY1 176 aa13.6□□□□□ -0.23
LMNA-222ENST00000508500 CDH10Q9Y6N8 788 aa13.6□□□□□ -0.23
LMNA-222ENST00000508500 MEGF8Q7Z7M0 2845 aa13.59□□□□□ -0.23
LMNA-222ENST00000508500 TVP23AA6NH52 213 aa13.59□□□□□ -0.23
LMNA-222ENST00000508500 CEACAM18A8MTB9 384 aa13.59□□□□□ -0.23
LMNA-222ENST00000508500 H0YJX3 145 aa13.59□□□□□ -0.23
LMNA-222ENST00000508500 TNFRSF11BO00300 401 aa13.59□□□□□ -0.23
LMNA-222ENST00000508500 ZNF12P17014 697 aa13.59□□□□□ -0.23
LMNA-222ENST00000508500 CFPP27918 469 aa13.59□□□□□ -0.23
LMNA-222ENST00000508500 IFNGR2P38484 337 aa13.59□□□□□ -0.23
LMNA-222ENST00000508500 MDH2P40926 338 aaKnown RBP13.59□□□□□ -0.23
LMNA-222ENST00000508500 HOXA4Q00056 320 aaPredicted RBP13.59□□□□□ -0.23
LMNA-222ENST00000508500 PAX2Q02962 417 aa13.59□□□□□ -0.23
LMNA-222ENST00000508500 ZNF154Q13106 437 aa13.59□□□□□ -0.23
LMNA-222ENST00000508500 SLC36A3Q495N2 470 aa13.59□□□□□ -0.23
LMNA-222ENST00000508500 KLHL36Q8N4N3 616 aa13.59□□□□□ -0.23
LMNA-222ENST00000508500 TEX29Q8N6K0 151 aa13.59□□□□□ -0.23
LMNA-222ENST00000508500 OR4Q3Q8NH05 313 aa13.59□□□□□ -0.23
LMNA-222ENST00000508500 PKP2Q99959 881 aa13.59□□□□□ -0.23
LMNA-222ENST00000508500 OSBPL10Q9BXB5 764 aa13.59□□□□□ -0.23
LMNA-222ENST00000508500 VCXQ9H320 206 aa13.59□□□□□ -0.23
LMNA-222ENST00000508500 DNAJB9Q9UBS3 223 aa13.59□□□□□ -0.23
LMNA-222ENST00000508500 INSIG2Q9Y5U4 225 aa13.59□□□□□ -0.23
LMNA-222ENST00000508500 TMEM89A2RUT3 159 aa13.58□□□□□ -0.24
LMNA-222ENST00000508500 HLA-DQA2P01906 255 aa13.58□□□□□ -0.24
LMNA-222ENST00000508500 OTX1P32242 354 aaPredicted RBP13.58□□□□□ -0.24
LMNA-222ENST00000508500 SCGB2A2Q13296 93 aa13.58□□□□□ -0.24
LMNA-222ENST00000508500 SNAI3Q3KNW1 292 aa13.58□□□□□ -0.24
LMNA-222ENST00000508500 SLC27A4Q6P1M0 643 aa13.58□□□□□ -0.24
LMNA-222ENST00000508500 RASSF6Q6ZTQ3 369 aa13.58□□□□□ -0.24
LMNA-222ENST00000508500 MOGAT3Q86VF5 341 aa13.58□□□□□ -0.24
LMNA-222ENST00000508500 PACRGLQ8N7B6 248 aa13.58□□□□□ -0.24
LMNA-222ENST00000508500 SLC37A3Q8NCC5 494 aa13.58□□□□□ -0.24
LMNA-222ENST00000508500 OR51L1Q8NGJ5 315 aa13.58□□□□□ -0.24
LMNA-222ENST00000508500 OR9Q1Q8NGQ5 310 aa13.58□□□□□ -0.24
LMNA-222ENST00000508500 OR2AJ1Q8NGZ0 328 aa13.58□□□□□ -0.24
LMNA-222ENST00000508500 FAM216AQ8WUB2 273 aa13.58□□□□□ -0.24
LMNA-222ENST00000508500 LRTOMTQ8WZ04 291 aa13.58□□□□□ -0.24
LMNA-222ENST00000508500 CDADC1Q9BWV3 514 aa13.58□□□□□ -0.24
LMNA-222ENST00000508500 WIPF1O43516 503 aa13.57□□□□□ -0.24
LMNA-222ENST00000508500 TIPRLO75663 272 aa13.57□□□□□ -0.24
LMNA-222ENST00000508500 LCATP04180 440 aa13.57□□□□□ -0.24
LMNA-222ENST00000508500 CLUP10909 449 aa13.57□□□□□ -0.24
LMNA-222ENST00000508500 CD80P33681 288 aa13.57□□□□□ -0.24
LMNA-222ENST00000508500 SRP9P49458 86 aaKnown RBP13.57□□□□□ -0.24
LMNA-222ENST00000508500 COMPP49747 757 aaPredicted RBP13.57□□□□□ -0.24
LMNA-222ENST00000508500 RAD23AP54725 363 aa13.57□□□□□ -0.24
LMNA-222ENST00000508500 ECH1Q13011 328 aa13.57□□□□□ -0.24
LMNA-222ENST00000508500 ZNF181Q2M3W8 571 aa13.57□□□□□ -0.24
LMNA-222ENST00000508500 C12orf54Q6X4T0 127 aa13.57□□□□□ -0.24
LMNA-222ENST00000508500 BCL6BQ8N143 479 aaPredicted RBP13.57□□□□□ -0.24
LMNA-222ENST00000508500 DACT3Q96B18 629 aaPredicted RBP13.57□□□□□ -0.24
LMNA-222ENST00000508500 TMEM246Q9BRR3 403 aa13.57□□□□□ -0.24
LMNA-222ENST00000508500 C9orf16Q9BUW7 83 aa13.57□□□□□ -0.24
LMNA-222ENST00000508500 RBM4Q9BWF3 364 aaKnown RBP13.57□□□□□ -0.24
LMNA-222ENST00000508500 NMNAT2Q9BZQ4 307 aa13.57□□□□□ -0.24
LMNA-222ENST00000508500 DDX28Q9NUL7 540 aaKnown RBP13.57□□□□□ -0.24
LMNA-222ENST00000508500 TMEM100Q9NV29 134 aa13.57□□□□□ -0.24
LMNA-222ENST00000508500 PKD1L1Q8TDX9 2849 aa13.56□□□□□ -0.24
LMNA-222ENST00000508500 TRIM77I1YAP6 450 aa13.56□□□□□ -0.24
LMNA-222ENST00000508500 M0R135 149 aa13.56□□□□□ -0.24
LMNA-222ENST00000508500 CCNB2O95067 398 aa13.56□□□□□ -0.24
LMNA-222ENST00000508500 GYPBP06028 91 aa13.56□□□□□ -0.24
LMNA-222ENST00000508500 GATA4P43694 442 aa13.56□□□□□ -0.24
LMNA-222ENST00000508500 TPTEP56180 551 aa13.56□□□□□ -0.24
LMNA-222ENST00000508500 ZNF92Q03936 586 aa13.56□□□□□ -0.24
LMNA-222ENST00000508500 PAX8Q06710 450 aa13.56□□□□□ -0.24
LMNA-222ENST00000508500 CRMP1Q14194 572 aa13.56□□□□□ -0.24
LMNA-222ENST00000508500 MPPED2Q15777 294 aa13.56□□□□□ -0.24
LMNA-222ENST00000508500 PRAMEF6Q5VXH4 476 aa13.56□□□□□ -0.24
LMNA-222ENST00000508500 RPL13AP3Q6NVV1 102 aa13.56□□□□□ -0.24
LMNA-222ENST00000508500 LYPD2Q6UXB3 125 aa13.56□□□□□ -0.24
LMNA-222ENST00000508500 KLBQ86Z14 1044 aa13.56□□□□□ -0.24
LMNA-222ENST00000508500 MUC20Q8N307 709 aaPredicted RBP13.56□□□□□ -0.24
LMNA-222ENST00000508500 LNX2Q8N448 690 aa13.56□□□□□ -0.24
LMNA-222ENST00000508500 AQP11Q8NBQ7 271 aa13.56□□□□□ -0.24
LMNA-222ENST00000508500 C19orf18Q8NEA5 215 aa13.56□□□□□ -0.24
LMNA-222ENST00000508500 OR52L1Q8NGH7 329 aa13.56□□□□□ -0.24
LMNA-222ENST00000508500 OR2AE1Q8NHA4 323 aa13.56□□□□□ -0.24
LMNA-222ENST00000508500 NRG4Q8WWG1 115 aa13.56□□□□□ -0.24
LMNA-222ENST00000508500 NRBF2Q96F24 287 aa13.56□□□□□ -0.24
LMNA-222ENST00000508500 ZNF799Q96GE5 643 aa13.56□□□□□ -0.24
LMNA-222ENST00000508500 ZNF48Q96MX3 618 aaPredicted RBP13.56□□□□□ -0.24
LMNA-222ENST00000508500 SUCNR1Q9BXA5 334 aa13.56□□□□□ -0.24
LMNA-222ENST00000508500 TSSK6Q9BXA6 273 aa13.56□□□□□ -0.24
LMNA-222ENST00000508500 HCAR1Q9BXC0 346 aa13.56□□□□□ -0.24
LMNA-222ENST00000508500 ZNF69Q9UC07 566 aa13.56□□□□□ -0.24
LMNA-222ENST00000508500 KCNG2Q9UJ96 466 aa13.56□□□□□ -0.24
LMNA-222ENST00000508500 SOX21Q9Y651 276 aaPredicted RBP13.56□□□□□ -0.24
LMNA-222ENST00000508500 AUP1Q9Y679 476 aa13.56□□□□□ -0.24
LMNA-222ENST00000508500 COMMD3-BMI1R4GMX3 469 aa13.56□□□□□ -0.24
LMNA-222ENST00000508500 U3KQV3 271 aa13.56□□□□□ -0.24
LMNA-222ENST00000508500 IFNL4K9M1U5 179 aa13.55□□□□□ -0.24
LMNA-222ENST00000508500 SOX14O95416 240 aa13.55□□□□□ -0.24
LMNA-222ENST00000508500 CST1P01037 141 aa13.55□□□□□ -0.24
LMNA-222ENST00000508500 ZNF823P16415 610 aa13.55□□□□□ -0.24
LMNA-222ENST00000508500 CD200P41217 278 aa13.55□□□□□ -0.24
LMNA-222ENST00000508500 HSPA13P48723 471 aa13.55□□□□□ -0.24
LMNA-222ENST00000508500 PCK2Q16822 640 aa13.55□□□□□ -0.24
LMNA-222ENST00000508500 ZNF404Q494X3 552 aa13.55□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 108.7 ms