RNA–Protein interactions for RNA: ENST00000507476.5

LINC01088-203, Transcript of long intergenic non-protein coding RNA 1088, humanhuman

TSL 3 BASIC

Gene LINC01088, Length 785 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01088-203ENST00000507476 RPF2Q9H7B2 306 aaKnown RBP3.5□□□□□ -1.85
LINC01088-203ENST00000507476 TMEM9BQ9NQ34 198 aa3.5□□□□□ -1.85
LINC01088-203ENST00000507476 THAP10Q9P2Z0 257 aaPredicted RBP3.5□□□□□ -1.85
LINC01088-203ENST00000507476 PRO0461Q9UI25 63 aa3.5□□□□□ -1.85
LINC01088-203ENST00000507476 VSIG4Q9Y279 399 aa3.5□□□□□ -1.85
LINC01088-203ENST00000507476 COL22A1Q8NFW1 1626 aaPredicted RBP3.5□□□□□ -1.85
LINC01088-203ENST00000507476 A6NDN8 102 aa3.49□□□□□ -1.85
LINC01088-203ENST00000507476 C12orf77C9JDV5 145 aa3.49□□□□□ -1.85
LINC01088-203ENST00000507476 ANKRD65E5RJM6 399 aa3.49□□□□□ -1.85
LINC01088-203ENST00000507476 M0R036 132 aa3.49□□□□□ -1.85
LINC01088-203ENST00000507476 ZNF593O00488 134 aaPredicted RBP3.49□□□□□ -1.85
LINC01088-203ENST00000507476 SSNA1O43805 119 aa3.49□□□□□ -1.85
LINC01088-203ENST00000507476 SNAP91O60641 907 aa3.49□□□□□ -1.85
LINC01088-203ENST00000507476 ACTL6AO96019 429 aa3.49□□□□□ -1.85
LINC01088-203ENST00000507476 PTHP01270 115 aa3.49□□□□□ -1.85
LINC01088-203ENST00000507476 ORM1P02763 201 aa3.49□□□□□ -1.85
LINC01088-203ENST00000507476 RETP07949 1114 aa3.49□□□□□ -1.85
LINC01088-203ENST00000507476 OR5AL1P0C617 328 aa3.49□□□□□ -1.85
LINC01088-203ENST00000507476 MLNP12872 115 aa3.49□□□□□ -1.85
LINC01088-203ENST00000507476 NQO1P15559 274 aaKnown RBP3.49□□□□□ -1.85
LINC01088-203ENST00000507476 IGFBP3P17936 291 aaPredicted RBP3.49□□□□□ -1.85
LINC01088-203ENST00000507476 GDI2P50395 445 aaKnown RBP3.49□□□□□ -1.85
LINC01088-203ENST00000507476 AP3S2P59780 193 aa3.49□□□□□ -1.85
LINC01088-203ENST00000507476 CKAP4Q07065 602 aaKnown RBP3.49□□□□□ -1.85
LINC01088-203ENST00000507476 QPRTQ15274 297 aa3.49□□□□□ -1.85
LINC01088-203ENST00000507476 TRAM1Q15629 374 aa3.49□□□□□ -1.85
LINC01088-203ENST00000507476 ZBTB6Q15916 424 aa3.49□□□□□ -1.85
LINC01088-203ENST00000507476 CCL14Q16627 93 aa3.49□□□□□ -1.85
LINC01088-203ENST00000507476 TMEM249Q2WGJ8 235 aa3.49□□□□□ -1.85
LINC01088-203ENST00000507476 SLC36A2Q495M3 483 aa3.49□□□□□ -1.85
LINC01088-203ENST00000507476 COX19Q49B96 90 aa3.49□□□□□ -1.85
LINC01088-203ENST00000507476 DNAL1Q4LDG9 190 aa3.49□□□□□ -1.85
LINC01088-203ENST00000507476 VAX1Q5SQQ9 334 aa3.49□□□□□ -1.85
LINC01088-203ENST00000507476 FAM27D1Q5T7N8 215 aa3.49□□□□□ -1.85
LINC01088-203ENST00000507476 TTC33Q6PID6 262 aaPredicted RBP3.49□□□□□ -1.85
LINC01088-203ENST00000507476 C10orf107Q8IVU9 208 aa3.49□□□□□ -1.85
LINC01088-203ENST00000507476 ATPAF2Q8N5M1 289 aa3.49□□□□□ -1.85
LINC01088-203ENST00000507476 C4orf32Q8N8J7 132 aa3.49□□□□□ -1.85
LINC01088-203ENST00000507476 CHST4Q8NCG5 386 aa3.49□□□□□ -1.85
LINC01088-203ENST00000507476 CCDC54Q8NEL0 328 aa3.49□□□□□ -1.85
LINC01088-203ENST00000507476 OR52E2Q8NGJ4 325 aa3.49□□□□□ -1.85
LINC01088-203ENST00000507476 OR51S1Q8NGJ8 323 aa3.49□□□□□ -1.85
LINC01088-203ENST00000507476 OR10Z1Q8NGY1 313 aa3.49□□□□□ -1.85
LINC01088-203ENST00000507476 AGAP11Q8TF27 550 aa3.49□□□□□ -1.85
LINC01088-203ENST00000507476 SSC4DQ8WTU2 575 aa3.49□□□□□ -1.85
LINC01088-203ENST00000507476 LRRC29Q8WV35 223 aa3.49□□□□□ -1.85
LINC01088-203ENST00000507476 RNF133Q8WVZ7 376 aa3.49□□□□□ -1.85
LINC01088-203ENST00000507476 TMEM234Q8WY98 164 aa3.49□□□□□ -1.85
LINC01088-203ENST00000507476 OPTNQ96CV9 577 aa3.49□□□□□ -1.85
LINC01088-203ENST00000507476 SLC25A38Q96DW6 304 aa3.49□□□□□ -1.85
LINC01088-203ENST00000507476 AGMATQ9BSE5 352 aa3.49□□□□□ -1.85
LINC01088-203ENST00000507476 RSG1Q9BU20 258 aa3.49□□□□□ -1.85
LINC01088-203ENST00000507476 C9orf16Q9BUW7 83 aa3.49□□□□□ -1.85
LINC01088-203ENST00000507476 ZBP1Q9H171 429 aa3.49□□□□□ -1.85
LINC01088-203ENST00000507476 DHX35Q9H5Z1 703 aaKnown RBP3.49□□□□□ -1.85
LINC01088-203ENST00000507476 ACOT13Q9NPJ3 140 aa3.49□□□□□ -1.85
LINC01088-203ENST00000507476 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP3.49□□□□□ -1.85
LINC01088-203ENST00000507476 NLE1Q9NVX2 485 aaPredicted RBP3.49□□□□□ -1.85
LINC01088-203ENST00000507476 PLEKHJ1Q9NW61 149 aa3.49□□□□□ -1.85
LINC01088-203ENST00000507476 AP3M1Q9Y2T2 418 aa3.49□□□□□ -1.85
LINC01088-203ENST00000507476 MAPK8IP3Q9UPT6 1336 aa3.48□□□□□ -1.85
LINC01088-203ENST00000507476 IGKV1D-8A0A087WSZ0 117 aa3.48□□□□□ -1.85
LINC01088-203ENST00000507476 TRAV9-2A0A087WT02 112 aa3.48□□□□□ -1.85
LINC01088-203ENST00000507476 A0A0G2JLM5 398 aa3.48□□□□□ -1.85
LINC01088-203ENST00000507476 RPL37AP8A6NKH3 93 aa3.48□□□□□ -1.85
LINC01088-203ENST00000507476 LRRN3E7EW58 273 aa3.48□□□□□ -1.85
LINC01088-203ENST00000507476 K7ENP7 123 aa3.48□□□□□ -1.85
LINC01088-203ENST00000507476 FABP7O15540 132 aa3.48□□□□□ -1.85
LINC01088-203ENST00000507476 CRXO43186 299 aaPredicted RBP3.48□□□□□ -1.85
LINC01088-203ENST00000507476 ATP8B1O43520 1251 aa3.48□□□□□ -1.85
LINC01088-203ENST00000507476 SRP72O76094 671 aaKnown RBP3.48□□□□□ -1.85
LINC01088-203ENST00000507476 SNAPINO95295 136 aa3.48□□□□□ -1.85
LINC01088-203ENST00000507476 TTC4O95801 387 aa3.48□□□□□ -1.85
LINC01088-203ENST00000507476 HOXC4P09017 264 aaPredicted RBP3.48□□□□□ -1.85
LINC01088-203ENST00000507476 HCAR3P49019 387 aa3.48□□□□□ -1.85
LINC01088-203ENST00000507476 TGM4P49221 684 aa3.48□□□□□ -1.85
LINC01088-203ENST00000507476 FABP6P51161 128 aa3.48□□□□□ -1.85
LINC01088-203ENST00000507476 OR12D2P58182 307 aa3.48□□□□□ -1.85
LINC01088-203ENST00000507476 ZNF121P58317 390 aaPredicted RBP3.48□□□□□ -1.85
LINC01088-203ENST00000507476 RAB8AP61006 207 aa3.48□□□□□ -1.85
LINC01088-203ENST00000507476 RPL10AP62906 217 aaKnown RBP3.48□□□□□ -1.85
LINC01088-203ENST00000507476 SARNPP82979 210 aaKnown RBP3.48□□□□□ -1.85
LINC01088-203ENST00000507476 SEMG2Q02383 582 aa3.48□□□□□ -1.85
LINC01088-203ENST00000507476 ZNF266Q14584 549 aa3.48□□□□□ -1.85
LINC01088-203ENST00000507476 CASP8Q14790 479 aa3.48□□□□□ -1.85
LINC01088-203ENST00000507476 PSG5Q15238 335 aa3.48□□□□□ -1.85
LINC01088-203ENST00000507476 TMED2Q15363 201 aa3.48□□□□□ -1.85
LINC01088-203ENST00000507476 ZNF726P1Q15940 193 aa3.48□□□□□ -1.85
LINC01088-203ENST00000507476 SNCBQ16143 134 aa3.48□□□□□ -1.85
LINC01088-203ENST00000507476 ZSCAN26Q16670 478 aa3.48□□□□□ -1.85
LINC01088-203ENST00000507476 LRRC36Q1X8D7 754 aa3.48□□□□□ -1.85
LINC01088-203ENST00000507476 LCE1CQ5T751 118 aa3.48□□□□□ -1.85
LINC01088-203ENST00000507476 LCE1BQ5T7P3 118 aa3.48□□□□□ -1.85
LINC01088-203ENST00000507476 OR2T5Q6IEZ7 315 aa3.48□□□□□ -1.85
LINC01088-203ENST00000507476 FAM45BPQ6NSW5 357 aa3.48□□□□□ -1.85
LINC01088-203ENST00000507476 FAM173BQ6P4H8 233 aa3.48□□□□□ -1.85
LINC01088-203ENST00000507476 REG3GQ6UW15 175 aa3.48□□□□□ -1.85
LINC01088-203ENST00000507476 C2orf66Q6UXQ4 117 aa3.48□□□□□ -1.85
LINC01088-203ENST00000507476 ZNF620Q6ZNG0 422 aa3.48□□□□□ -1.85
LINC01088-203ENST00000507476 SLC34A3Q8N130 599 aa3.48□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms