RNA–Protein interactions for RNA: ENST00000507401.2

SCN1A-207, Transcript of sodium voltage-gated channel alpha subunit 1, humanhuman

TSL 3

Gene SCN1A, Length 711 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1A-207ENST00000507401 MPGP29372 298 aa7.01□□□□□ -1.29
SCN1A-207ENST00000507401 GRK5P34947 590 aa7.01□□□□□ -1.29
SCN1A-207ENST00000507401 TGM4P49221 684 aa7.01□□□□□ -1.29
SCN1A-207ENST00000507401 P2RY4P51582 365 aa7.01□□□□□ -1.29
SCN1A-207ENST00000507401 ATP5J2P56134 94 aa7.01□□□□□ -1.29
SCN1A-207ENST00000507401 PITPNAQ00169 270 aa7.01□□□□□ -1.29
SCN1A-207ENST00000507401 PUDPQ08623 228 aa7.01□□□□□ -1.29
SCN1A-207ENST00000507401 ACSM1Q08AH1 577 aa7.01□□□□□ -1.29
SCN1A-207ENST00000507401 EXOSC2Q13868 293 aaKnown RBP7.01□□□□□ -1.29
SCN1A-207ENST00000507401 OR7A5Q15622 319 aa7.01□□□□□ -1.29
SCN1A-207ENST00000507401 TRAM1Q15629 374 aa7.01□□□□□ -1.29
SCN1A-207ENST00000507401 SSX1Q16384 188 aa7.01□□□□□ -1.29
SCN1A-207ENST00000507401 PGGHGQ32M88 737 aa7.01□□□□□ -1.29
SCN1A-207ENST00000507401 IFI44LQ53G44 452 aa7.01□□□□□ -1.29
SCN1A-207ENST00000507401 RPS26P11Q5JNZ5 115 aaPredicted RBP7.01□□□□□ -1.29
SCN1A-207ENST00000507401 NHLRC3Q5JS37 347 aa7.01□□□□□ -1.29
SCN1A-207ENST00000507401 GCNT6Q5T4J0 391 aa7.01□□□□□ -1.29
SCN1A-207ENST00000507401 TSPO2Q5TGU0 170 aa7.01□□□□□ -1.29
SCN1A-207ENST00000507401 ULK3Q6PHR2 472 aa7.01□□□□□ -1.29
SCN1A-207ENST00000507401 CD200R1LQ6Q8B3 271 aa7.01□□□□□ -1.29
SCN1A-207ENST00000507401 CLEC9AQ6UXN8 241 aa7.01□□□□□ -1.29
SCN1A-207ENST00000507401 CASP12Q6UXS9 341 aa7.01□□□□□ -1.29
SCN1A-207ENST00000507401 ABHD12BQ7Z5M8 362 aaPredicted RBP7.01□□□□□ -1.29
SCN1A-207ENST00000507401 DTX2Q86UW9 622 aa7.01□□□□□ -1.29
SCN1A-207ENST00000507401 LRRC28Q86X40 367 aaPredicted RBP7.01□□□□□ -1.29
SCN1A-207ENST00000507401 CDH26Q8IXH8 852 aa7.01□□□□□ -1.29
SCN1A-207ENST00000507401 WDR31Q8NA23 367 aa7.01□□□□□ -1.29
SCN1A-207ENST00000507401 C11orf65Q8NCR3 313 aa7.01□□□□□ -1.29
SCN1A-207ENST00000507401 OR6S1Q8NH40 331 aa7.01□□□□□ -1.29
SCN1A-207ENST00000507401 GEMIN6Q8WXD5 167 aaKnown RBP7.01□□□□□ -1.29
SCN1A-207ENST00000507401 YIPF5Q969M3 257 aa7.01□□□□□ -1.29
SCN1A-207ENST00000507401 PHF21AQ96BD5 680 aa7.01□□□□□ -1.29
SCN1A-207ENST00000507401 DNAJA3Q96EY1 480 aa7.01□□□□□ -1.29
SCN1A-207ENST00000507401 RSPO3Q9BXY4 272 aaPredicted RBP7.01□□□□□ -1.29
SCN1A-207ENST00000507401 BARHL1Q9BZE3 327 aa7.01□□□□□ -1.29
SCN1A-207ENST00000507401 MIXL1Q9H2W2 232 aa7.01□□□□□ -1.29
SCN1A-207ENST00000507401 OR51J1Q9H342 316 aa7.01□□□□□ -1.29
SCN1A-207ENST00000507401 GHITMQ9H3K2 345 aa7.01□□□□□ -1.29
SCN1A-207ENST00000507401 OBP2BQ9NPH6 170 aa7.01□□□□□ -1.29
SCN1A-207ENST00000507401 BIN3Q9NQY0 253 aa7.01□□□□□ -1.29
SCN1A-207ENST00000507401 SLC7A10Q9NS82 523 aa7.01□□□□□ -1.29
SCN1A-207ENST00000507401 SNTG1Q9NSN8 517 aa7.01□□□□□ -1.29
SCN1A-207ENST00000507401 SDHAF2Q9NX18 166 aa7.01□□□□□ -1.29
SCN1A-207ENST00000507401 VNN3Q9NY84 501 aa7.01□□□□□ -1.29
SCN1A-207ENST00000507401 AMDHD2Q9Y303 409 aa7.01□□□□□ -1.29
SCN1A-207ENST00000507401 NSD1Q96L73 2696 aaPredicted RBP7.01□□□□□ -1.29
SCN1A-207ENST00000507401 USF3Q68DE3 2245 aa7□□□□□ -1.29
SCN1A-207ENST00000507401 MEGF11A6BM72 1044 aa7□□□□□ -1.29
SCN1A-207ENST00000507401 NAP1L6A6NFF2 107 aa7□□□□□ -1.29
SCN1A-207ENST00000507401 F8W036 122 aa7□□□□□ -1.29
SCN1A-207ENST00000507401 TEX46H3BTG2 121 aa7□□□□□ -1.29
SCN1A-207ENST00000507401 H7C1Q1 480 aa7□□□□□ -1.29
SCN1A-207ENST00000507401 AIPO00170 330 aa7□□□□□ -1.29
SCN1A-207ENST00000507401 FRS3O43559 492 aa7□□□□□ -1.29
SCN1A-207ENST00000507401 CDRT1O95170 752 aa7□□□□□ -1.29
SCN1A-207ENST00000507401 OR5F1O95221 314 aa7□□□□□ -1.29
SCN1A-207ENST00000507401 AHSA1O95433 338 aa7□□□□□ -1.29
SCN1A-207ENST00000507401 RAB36O95755 333 aa7□□□□□ -1.29
SCN1A-207ENST00000507401 WNT11O96014 354 aa7□□□□□ -1.29
SCN1A-207ENST00000507401 CD8AP01732 235 aa7□□□□□ -1.29
SCN1A-207ENST00000507401 SOD3P08294 240 aa7□□□□□ -1.29
SCN1A-207ENST00000507401 ITGA5P08648 1049 aa7□□□□□ -1.29
SCN1A-207ENST00000507401 FGF2P09038 288 aa7□□□□□ -1.29
SCN1A-207ENST00000507401 ACSM4P0C7M7 580 aa7□□□□□ -1.29
SCN1A-207ENST00000507401 SMIM6P0DI80 62 aa7□□□□□ -1.29
SCN1A-207ENST00000507401 SULT1A3P0DMM9 295 aa7□□□□□ -1.29
SCN1A-207ENST00000507401 SULT1A4P0DMN0 295 aa7□□□□□ -1.29
SCN1A-207ENST00000507401 CD40P25942 277 aa7□□□□□ -1.29
SCN1A-207ENST00000507401 TGFBR1P36897 503 aa7□□□□□ -1.29
SCN1A-207ENST00000507401 RAB13P51153 203 aa7□□□□□ -1.29
SCN1A-207ENST00000507401 PRPS1P60891 318 aa7□□□□□ -1.29
SCN1A-207ENST00000507401 RPS7P62081 194 aaKnown RBP7□□□□□ -1.29
SCN1A-207ENST00000507401 SELENOWP63302 87 aa7□□□□□ -1.29
SCN1A-207ENST00000507401 BDH1Q02338 343 aa7□□□□□ -1.29
SCN1A-207ENST00000507401 EGR4Q05215 589 aa7□□□□□ -1.29
SCN1A-207ENST00000507401 LTBQ06643 244 aa7□□□□□ -1.29
SCN1A-207ENST00000507401 FGL1Q08830 312 aa7□□□□□ -1.29
SCN1A-207ENST00000507401 HNRNPA0Q13151 305 aaKnown RBP7□□□□□ -1.29
SCN1A-207ENST00000507401 DYRK1AQ13627 763 aa7□□□□□ -1.29
SCN1A-207ENST00000507401 PLA1AQ53H76 456 aa7□□□□□ -1.29
SCN1A-207ENST00000507401 UQCC3Q6UW78 93 aa7□□□□□ -1.29
SCN1A-207ENST00000507401 RNF113BQ8IZP6 322 aaKnown RBP7□□□□□ -1.29
SCN1A-207ENST00000507401 CIARTQ8N365 385 aaPredicted RBP7□□□□□ -1.29
SCN1A-207ENST00000507401 SPICQ8N5J4 248 aa7□□□□□ -1.29
SCN1A-207ENST00000507401 OR4C15Q8NGM1 316 aa7□□□□□ -1.29
SCN1A-207ENST00000507401 OR2T4Q8NH00 348 aa7□□□□□ -1.29
SCN1A-207ENST00000507401 OR56B4Q8NH76 319 aa7□□□□□ -1.29
SCN1A-207ENST00000507401 NFKBIDQ8NI38 313 aa7□□□□□ -1.29
SCN1A-207ENST00000507401 SCARB1Q8WTV0 552 aa7□□□□□ -1.29
SCN1A-207ENST00000507401 C15orf40Q8WUR7 153 aa7□□□□□ -1.29
SCN1A-207ENST00000507401 CMTM3Q96MX0 182 aa7□□□□□ -1.29
SCN1A-207ENST00000507401 OXGR1Q96P68 337 aa7□□□□□ -1.29
SCN1A-207ENST00000507401 ZNF385AQ96PM9 386 aaKnown RBP7□□□□□ -1.29
SCN1A-207ENST00000507401 SLC38A2Q96QD8 506 aa7□□□□□ -1.29
SCN1A-207ENST00000507401 FEVQ99581 238 aa7□□□□□ -1.29
SCN1A-207ENST00000507401 PDCD10Q9BUL8 212 aa7□□□□□ -1.29
SCN1A-207ENST00000507401 LINC00470Q9BZP3 86 aa7□□□□□ -1.29
SCN1A-207ENST00000507401 POLR2J2Q9GZM3 115 aaKnown RBP7□□□□□ -1.29
SCN1A-207ENST00000507401 SLCO5A1Q9H2Y9 848 aa7□□□□□ -1.29
SCN1A-207ENST00000507401 TMEM27Q9HBJ8 222 aa7□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 85.4 ms