RNA–Protein interactions for RNA: ENST00000507247.5

RNF4-208, Transcript of ring finger protein 4, humanhuman

TSL 1 (best)

Gene RNF4, Length 616 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-208ENST00000507247 DOPEY1Q5JWR5 2465 aa12.22□□□□□ -0.45
RNF4-208ENST00000507247 USP9XQ93008 2570 aaPredicted RBP12.22□□□□□ -0.45
RNF4-208ENST00000507247 SHISA9B4DS77 424 aa12.22□□□□□ -0.45
RNF4-208ENST00000507247 PLPP2O43688 288 aa12.22□□□□□ -0.45
RNF4-208ENST00000507247 GPRIN2O60269 458 aa12.22□□□□□ -0.45
RNF4-208ENST00000507247 ZFPL1O95159 310 aa12.22□□□□□ -0.45
RNF4-208ENST00000507247 PLAUP00749 431 aa12.22□□□□□ -0.45
RNF4-208ENST00000507247 IGLV3-1P01715 115 aa12.22□□□□□ -0.45
RNF4-208ENST00000507247 CPEP16870 476 aa12.22□□□□□ -0.45
RNF4-208ENST00000507247 NR4A1P22736 598 aa12.22□□□□□ -0.45
RNF4-208ENST00000507247 LIPAP38571 399 aa12.22□□□□□ -0.45
RNF4-208ENST00000507247 PRSS12P56730 875 aa12.22□□□□□ -0.45
RNF4-208ENST00000507247 PPP1CBP62140 327 aa12.22□□□□□ -0.45
RNF4-208ENST00000507247 NKX6-1P78426 367 aaPredicted RBP12.22□□□□□ -0.45
RNF4-208ENST00000507247 SLC3A1Q07837 685 aa12.22□□□□□ -0.45
RNF4-208ENST00000507247 SNTB2Q13425 540 aaKnown RBP12.22□□□□□ -0.45
RNF4-208ENST00000507247 TPBGQ13641 420 aa12.22□□□□□ -0.45
RNF4-208ENST00000507247 SSX1Q16384 188 aa12.22□□□□□ -0.45
RNF4-208ENST00000507247 LIPKQ5VXJ0 399 aa12.22□□□□□ -0.45
RNF4-208ENST00000507247 ADAM5Q6NVV9 412 aa12.22□□□□□ -0.45
RNF4-208ENST00000507247 RDH10Q8IZV5 341 aa12.22□□□□□ -0.45
RNF4-208ENST00000507247 KBTBD8Q8NFY9 601 aa12.22□□□□□ -0.45
RNF4-208ENST00000507247 OR52H1Q8NGJ2 320 aa12.22□□□□□ -0.45
RNF4-208ENST00000507247 RGP1Q92546 391 aaPredicted RBP12.22□□□□□ -0.45
RNF4-208ENST00000507247 SGK3Q96BR1 496 aa12.22□□□□□ -0.45
RNF4-208ENST00000507247 SMIM19Q96E16 107 aa12.22□□□□□ -0.45
RNF4-208ENST00000507247 PIK3IP1Q96FE7 263 aa12.22□□□□□ -0.45
RNF4-208ENST00000507247 LYZL4Q96KX0 146 aa12.22□□□□□ -0.45
RNF4-208ENST00000507247 OR10A2Q9H208 303 aa12.22□□□□□ -0.45
RNF4-208ENST00000507247 VCX3AQ9NNX9 186 aa12.22□□□□□ -0.45
RNF4-208ENST00000507247 PTTG3PQ9NZH4 202 aa12.22□□□□□ -0.45
RNF4-208ENST00000507247 SCOCQ9UIL1 159 aa12.22□□□□□ -0.45
RNF4-208ENST00000507247 A0A1B0GTI1 187 aa12.21□□□□□ -0.45
RNF4-208ENST00000507247 TMEM212A6NML5 194 aa12.21□□□□□ -0.45
RNF4-208ENST00000507247 H3BSH0 61 aa12.21□□□□□ -0.45
RNF4-208ENST00000507247 J3QW42 95 aa12.21□□□□□ -0.45
RNF4-208ENST00000507247 P2RY10O00398 339 aa12.21□□□□□ -0.45
RNF4-208ENST00000507247 CD3EP07766 207 aa12.21□□□□□ -0.45
RNF4-208ENST00000507247 ALDH3B2P48448 385 aa12.21□□□□□ -0.45
RNF4-208ENST00000507247 ZNF92Q03936 586 aa12.21□□□□□ -0.45
RNF4-208ENST00000507247 MSMPQ1L6U9 139 aa12.21□□□□□ -0.45
RNF4-208ENST00000507247 GFOD2Q3B7J2 385 aa12.21□□□□□ -0.45
RNF4-208ENST00000507247 SPATA46Q5T0L3 261 aa12.21□□□□□ -0.45
RNF4-208ENST00000507247 ZNF544Q6NX49 715 aa12.21□□□□□ -0.45
RNF4-208ENST00000507247 SLC22A25Q6T423 547 aa12.21□□□□□ -0.45
RNF4-208ENST00000507247 PHC2Q8IXK0 858 aa12.21□□□□□ -0.45
RNF4-208ENST00000507247 OR1J1Q8NGS3 322 aa12.21□□□□□ -0.45
RNF4-208ENST00000507247 OR13C5Q8NGS8 318 aa12.21□□□□□ -0.45
RNF4-208ENST00000507247 OR10AC1Q8NH08 325 aa12.21□□□□□ -0.45
RNF4-208ENST00000507247 SLC25A40Q8TBP6 338 aa12.21□□□□□ -0.45
RNF4-208ENST00000507247 OR51E1Q8TCB6 317 aa12.21□□□□□ -0.45
RNF4-208ENST00000507247 NEUROG1Q92886 237 aa12.21□□□□□ -0.45
RNF4-208ENST00000507247 UFD1Q92890 307 aa12.21□□□□□ -0.45
RNF4-208ENST00000507247 TMIGD2Q96BF3 282 aa12.21□□□□□ -0.45
RNF4-208ENST00000507247 SPOCK3Q9BQ16 436 aa12.21□□□□□ -0.45
RNF4-208ENST00000507247 SP140LQ9H930 580 aa12.21□□□□□ -0.45
RNF4-208ENST00000507247 SLC24A3Q9HC58 644 aa12.21□□□□□ -0.45
RNF4-208ENST00000507247 NBPF19A0A087WUL8 3843 aa12.2□□□□□ -0.46
RNF4-208ENST00000507247 A0A0U1RQV5 110 aa12.2□□□□□ -0.46
RNF4-208ENST00000507247 LOC107986453A0A1B0GWG9 222 aa12.2□□□□□ -0.46
RNF4-208ENST00000507247 XRCC2O43543 280 aa12.2□□□□□ -0.46
RNF4-208ENST00000507247 TGFBR2P37173 567 aa12.2□□□□□ -0.46
RNF4-208ENST00000507247 RAD52P43351 418 aa12.2□□□□□ -0.46
RNF4-208ENST00000507247 NR1H2P55055 460 aa12.2□□□□□ -0.46
RNF4-208ENST00000507247 RPS25P62851 125 aaKnown RBP12.2□□□□□ -0.46
RNF4-208ENST00000507247 GPR50Q13585 617 aa12.2□□□□□ -0.46
RNF4-208ENST00000507247 HLXQ14774 488 aaPredicted RBP12.2□□□□□ -0.46
RNF4-208ENST00000507247 DAZAP2Q15038 168 aaPredicted RBP12.2□□□□□ -0.46
RNF4-208ENST00000507247 TMEM255AQ5JRV8 349 aa12.2□□□□□ -0.46
RNF4-208ENST00000507247 ZNF704Q6ZNC4 412 aaPredicted RBP12.2□□□□□ -0.46
RNF4-208ENST00000507247 ZNF676Q8N7Q3 588 aa12.2□□□□□ -0.46
RNF4-208ENST00000507247 NUP37Q8NFH4 326 aa12.2□□□□□ -0.46
RNF4-208ENST00000507247 OR51A4Q8NGJ6 313 aa12.2□□□□□ -0.46
RNF4-208ENST00000507247 OR5AK2Q8NH90 309 aa12.2□□□□□ -0.46
RNF4-208ENST00000507247 GHSRQ92847 366 aa12.2□□□□□ -0.46
RNF4-208ENST00000507247 SPSB4Q96A44 273 aa12.2□□□□□ -0.46
RNF4-208ENST00000507247 MARS2Q96GW9 593 aaKnown RBP12.2□□□□□ -0.46
RNF4-208ENST00000507247 REEP6Q96HR9 211 aa12.2□□□□□ -0.46
RNF4-208ENST00000507247 TMEM204Q9BSN7 226 aa12.2□□□□□ -0.46
RNF4-208ENST00000507247 BCL2L14Q9BZR8 327 aa12.2□□□□□ -0.46
RNF4-208ENST00000507247 OR2J1Q9GZK6 312 aa12.2□□□□□ -0.46
RNF4-208ENST00000507247 COMMD4Q9H0A8 199 aa12.2□□□□□ -0.46
RNF4-208ENST00000507247 GPR84Q9NQS5 396 aa12.2□□□□□ -0.46
RNF4-208ENST00000507247 SF3B6Q9Y3B4 125 aaKnown RBP12.2□□□□□ -0.46
RNF4-208ENST00000507247 RNF115Q9Y4L5 304 aa12.2□□□□□ -0.46
RNF4-208ENST00000507247 hCG_38984A0A1B0GV85 526 aa12.19□□□□□ -0.46
RNF4-208ENST00000507247 CCRL2O00421 344 aa12.19□□□□□ -0.46
RNF4-208ENST00000507247 ATE1O95260 518 aa12.19□□□□□ -0.46
RNF4-208ENST00000507247 ISG15P05161 165 aa12.19□□□□□ -0.46
RNF4-208ENST00000507247 CD1AP06126 327 aa12.19□□□□□ -0.46
RNF4-208ENST00000507247 UBCP0CG48 685 aaKnown RBP12.19□□□□□ -0.46
RNF4-208ENST00000507247 ACHEP22303 614 aa12.19□□□□□ -0.46
RNF4-208ENST00000507247 CCL1P22362 96 aa12.19□□□□□ -0.46
RNF4-208ENST00000507247 THBS4P35443 961 aa12.19□□□□□ -0.46
RNF4-208ENST00000507247 GLRXP35754 106 aa12.19□□□□□ -0.46
RNF4-208ENST00000507247 MPV17P39210 176 aa12.19□□□□□ -0.46
RNF4-208ENST00000507247 MAGEB1P43366 347 aa12.19□□□□□ -0.46
RNF4-208ENST00000507247 RPS11P62280 158 aaKnown RBP eCLIP12.19□□□□□ -0.46
RNF4-208ENST00000507247 TNK1Q13470 666 aa12.19□□□□□ -0.46
RNF4-208ENST00000507247 GK2Q14410 553 aaPredicted RBP12.19□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms