RNA–Protein interactions for RNA: ENST00000506690.1

SQSTM1-211, Transcript of sequestosome 1, humanhuman

TSL 2

Gene SQSTM1, Length 2,405 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQSTM1-211ENST00000506690 RTN4RL2Q86UN3 420 aa15.24■□□□□ 0.03
SQSTM1-211ENST00000506690 RAB3CQ96E17 227 aa15.24■□□□□ 0.03
SQSTM1-211ENST00000506690 OR2M4Q96R27 311 aa15.24■□□□□ 0.03
SQSTM1-211ENST00000506690 THAP10Q9P2Z0 257 aaPredicted RBP15.24■□□□□ 0.03
SQSTM1-211ENST00000506690 ANAPC10Q9UM13 185 aa15.24■□□□□ 0.03
SQSTM1-211ENST00000506690 TRBV23OR9-2A0A075B6M9 112 aa15.24■□□□□ 0.03
SQSTM1-211ENST00000506690 M0R036 132 aa15.24■□□□□ 0.03
SQSTM1-211ENST00000506690 ZNF217O75362 1048 aa15.24■□□□□ 0.03
SQSTM1-211ENST00000506690 APBB3O95704 486 aa15.24■□□□□ 0.03
SQSTM1-211ENST00000506690 BPNT1O95861 308 aa15.24■□□□□ 0.03
SQSTM1-211ENST00000506690 KLK3P07288 261 aaPredicted RBP15.24■□□□□ 0.03
SQSTM1-211ENST00000506690 CTNNB1P35222 781 aa15.24■□□□□ 0.03
SQSTM1-211ENST00000506690 SULT1A1P50225 295 aa15.24■□□□□ 0.03
SQSTM1-211ENST00000506690 INSM1Q01101 510 aaPredicted RBP15.24■□□□□ 0.03
SQSTM1-211ENST00000506690 SRSF5Q13243 272 aaKnown RBP15.24■□□□□ 0.03
SQSTM1-211ENST00000506690 SQSTM1Q13501 440 aa15.24■□□□□ 0.03
SQSTM1-211ENST00000506690 PEG10Q86TG7 708 aaKnown RBP15.24■□□□□ 0.03
SQSTM1-211ENST00000506690 MARCH3Q86UD3 253 aa15.24■□□□□ 0.03
SQSTM1-211ENST00000506690 ARRDC1Q8N5I2 433 aa15.24■□□□□ 0.03
SQSTM1-211ENST00000506690 OR52N5Q8NH56 324 aa15.24■□□□□ 0.03
SQSTM1-211ENST00000506690 OR10G6Q8NH81 332 aa15.24■□□□□ 0.03
SQSTM1-211ENST00000506690 S1PR5Q9H228 398 aa15.24■□□□□ 0.03
SQSTM1-211ENST00000506690 PRSS38A1L453 326 aa15.23■□□□□ 0.03
SQSTM1-211ENST00000506690 SLC16A7O60669 478 aa15.23■□□□□ 0.03
SQSTM1-211ENST00000506690 PVRP15151 417 aa15.23■□□□□ 0.03
SQSTM1-211ENST00000506690 NPY4RP50391 375 aa15.23■□□□□ 0.03
SQSTM1-211ENST00000506690 RHEBQ15382 184 aa15.23■□□□□ 0.03
SQSTM1-211ENST00000506690 ZNF239Q16600 458 aaKnown RBP15.23■□□□□ 0.03
SQSTM1-211ENST00000506690 KDM8Q8N371 416 aa15.23■□□□□ 0.03
SQSTM1-211ENST00000506690 COMMD1Q8N668 190 aa15.23■□□□□ 0.03
SQSTM1-211ENST00000506690 MRPL43Q8N983 215 aaKnown RBP15.23■□□□□ 0.03
SQSTM1-211ENST00000506690 OR2I1PQ8NGU4 316 aa15.23■□□□□ 0.03
SQSTM1-211ENST00000506690 C16orf52Q8NHV5 167 aa15.23■□□□□ 0.03
SQSTM1-211ENST00000506690 ASB16Q96NS5 453 aa15.23■□□□□ 0.03
SQSTM1-211ENST00000506690 RTBDNQ9BSG5 229 aaPredicted RBP15.23■□□□□ 0.03
SQSTM1-211ENST00000506690 C20orf24Q9BUV8 137 aa15.23■□□□□ 0.03
SQSTM1-211ENST00000506690 OPA3Q9H6K4 179 aa15.23■□□□□ 0.03
SQSTM1-211ENST00000506690 METTL8Q9H825 291 aaKnown RBP15.23■□□□□ 0.03
SQSTM1-211ENST00000506690 SPACA1Q9HBV2 294 aa15.23■□□□□ 0.03
SQSTM1-211ENST00000506690 POM121BA6NF01 834 aa15.23■□□□□ 0.03
SQSTM1-211ENST00000506690 RHPN2P1A8MT19 583 aa15.23■□□□□ 0.03
SQSTM1-211ENST00000506690 JTBO76095 146 aa15.23■□□□□ 0.03
SQSTM1-211ENST00000506690 HOXB5P09067 269 aa15.23■□□□□ 0.03
SQSTM1-211ENST00000506690 HOXA5P20719 270 aa15.23■□□□□ 0.03
SQSTM1-211ENST00000506690 THBS4P35443 961 aa15.23■□□□□ 0.03
SQSTM1-211ENST00000506690 GPR3P46089 330 aa15.23■□□□□ 0.03
SQSTM1-211ENST00000506690 RPS21P63220 83 aaKnown RBP15.23■□□□□ 0.03
SQSTM1-211ENST00000506690 FAM3AP98173 230 aa15.23■□□□□ 0.03
SQSTM1-211ENST00000506690 SPEM2Q0P670 501 aa15.23■□□□□ 0.03
SQSTM1-211ENST00000506690 PYY3Q5JQD4 70 aa15.23■□□□□ 0.03
SQSTM1-211ENST00000506690 PTCRAQ6ISU1 281 aaPredicted RBP15.23■□□□□ 0.03
SQSTM1-211ENST00000506690 PPP1R3BQ86XI6 285 aa15.23■□□□□ 0.03
SQSTM1-211ENST00000506690 ZNF519Q8TB69 540 aa15.23■□□□□ 0.03
SQSTM1-211ENST00000506690 SLC2A4RGQ9NR83 387 aa15.23■□□□□ 0.03
SQSTM1-211ENST00000506690 OR52A1Q9UKL2 312 aa15.23■□□□□ 0.03
SQSTM1-211ENST00000506690 C11orf98E9PRG8 122 aa15.22■□□□□ 0.03
SQSTM1-211ENST00000506690 TSPAN15O95858 294 aa15.22■□□□□ 0.03
SQSTM1-211ENST00000506690 ARG1P05089 322 aa15.22■□□□□ 0.03
SQSTM1-211ENST00000506690 CTLA4P16410 223 aa15.22■□□□□ 0.03
SQSTM1-211ENST00000506690 FPR2P25090 351 aa15.22■□□□□ 0.03
SQSTM1-211ENST00000506690 HSD11B1P28845 292 aa15.22■□□□□ 0.03
SQSTM1-211ENST00000506690 C2orf27AQ580R0 203 aa15.22■□□□□ 0.03
SQSTM1-211ENST00000506690 OR2A2Q6IF42 318 aa15.22■□□□□ 0.03
SQSTM1-211ENST00000506690 VITQ6UXI7 678 aa15.22■□□□□ 0.03
SQSTM1-211ENST00000506690 LILRB2Q8N423 598 aa15.22■□□□□ 0.03
SQSTM1-211ENST00000506690 OR9K2Q8NGE7 335 aa15.22■□□□□ 0.03
SQSTM1-211ENST00000506690 OR52N4Q8NGI2 321 aa15.22■□□□□ 0.03
SQSTM1-211ENST00000506690 OR1J1Q8NGS3 322 aa15.22■□□□□ 0.03
SQSTM1-211ENST00000506690 BAHD1Q8TBE0 780 aaPredicted RBP15.22■□□□□ 0.03
SQSTM1-211ENST00000506690 METTL21AQ8WXB1 218 aa15.22■□□□□ 0.03
SQSTM1-211ENST00000506690 KLHDC3Q9BQ90 382 aa15.22■□□□□ 0.03
SQSTM1-211ENST00000506690 NRSN2Q9GZP1 204 aa15.22■□□□□ 0.03
SQSTM1-211ENST00000506690 RAB33BQ9H082 229 aa15.22■□□□□ 0.03
SQSTM1-211ENST00000506690 STARD5Q9NSY2 213 aa15.22■□□□□ 0.03
SQSTM1-211ENST00000506690 VSX1Q9NZR4 365 aaPredicted RBP15.22■□□□□ 0.03
SQSTM1-211ENST00000506690 DNAH14Q0VDD8 3507 aa15.22■□□□□ 0.03
SQSTM1-211ENST00000506690 IFITM10A6NMD0 228 aa15.22■□□□□ 0.03
SQSTM1-211ENST00000506690 IFNA17P01571 189 aa15.22■□□□□ 0.03
SQSTM1-211ENST00000506690 BGLAPP02818 100 aa15.22■□□□□ 0.03
SQSTM1-211ENST00000506690 GDI1P31150 447 aa15.22■□□□□ 0.03
SQSTM1-211ENST00000506690 S100A10P60903 97 aa15.22■□□□□ 0.03
SQSTM1-211ENST00000506690 DEFA6Q01524 100 aa15.22■□□□□ 0.03
SQSTM1-211ENST00000506690 GUK1Q16774 197 aa15.22■□□□□ 0.03
SQSTM1-211ENST00000506690 NSUN5P2Q63ZY6 315 aa15.22■□□□□ 0.03
SQSTM1-211ENST00000506690 YPEL4Q96NS1 127 aa15.22■□□□□ 0.03
SQSTM1-211ENST00000506690 CUTCQ9NTM9 273 aa15.22■□□□□ 0.03
SQSTM1-211ENST00000506690 FBLN5Q9UBX5 448 aa15.22■□□□□ 0.03
SQSTM1-211ENST00000506690 NME1P15531 152 aaKnown RBP15.21■□□□□ 0.03
SQSTM1-211ENST00000506690 RPS2P15880 293 aaKnown RBP15.21■□□□□ 0.03
SQSTM1-211ENST00000506690 ZNF708P17019 499 aa15.21■□□□□ 0.03
SQSTM1-211ENST00000506690 PI3P19957 117 aa15.21■□□□□ 0.03
SQSTM1-211ENST00000506690 RPL27P61353 136 aaKnown RBP15.21■□□□□ 0.03
SQSTM1-211ENST00000506690 ACKR1Q16570 336 aa15.21■□□□□ 0.03
SQSTM1-211ENST00000506690 MIDNQ504T8 468 aa15.21■□□□□ 0.03
SQSTM1-211ENST00000506690 ACTBL2Q562R1 376 aa15.21■□□□□ 0.03
SQSTM1-211ENST00000506690 ZC3HAV1Q7Z2W4 902 aaKnown RBP15.21■□□□□ 0.03
SQSTM1-211ENST00000506690 OR56B1Q8NGI3 324 aa15.21■□□□□ 0.03
SQSTM1-211ENST00000506690 OR9A4Q8NGU2 314 aa15.21■□□□□ 0.03
SQSTM1-211ENST00000506690 CHRDQ9H2X0 955 aa15.21■□□□□ 0.03
SQSTM1-211ENST00000506690 GSKIPQ9P0R6 139 aa15.21■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms