RNA–Protein interactions for RNA: ENST00000505659.1

HMGB1P29-201, Transcript of high mobility group box 1 pseudogene 29, humanhuman

BASIC

Gene HMGB1P29, Length 499 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P29-201ENST00000505659 AKNAQ7Z591 1439 aa1.09□□□□□ -2.23
HMGB1P29-201ENST00000505659 XKRY2A2RUG3 117 aa1.09□□□□□ -2.23
HMGB1P29-201ENST00000505659 E7EQL1 145 aa1.09□□□□□ -2.23
HMGB1P29-201ENST00000505659 SERPINA3P01011 423 aa1.09□□□□□ -2.23
HMGB1P29-201ENST00000505659 MT-ND4P03905 459 aa1.09□□□□□ -2.23
HMGB1P29-201ENST00000505659 IL32P24001 234 aa1.09□□□□□ -2.23
HMGB1P29-201ENST00000505659 RAB9AP51151 201 aa1.09□□□□□ -2.23
HMGB1P29-201ENST00000505659 EIF3EP60228 445 aaKnown RBP1.09□□□□□ -2.23
HMGB1P29-201ENST00000505659 SP6Q3SY56 376 aa1.09□□□□□ -2.23
HMGB1P29-201ENST00000505659 PRAMEF5Q5TYX0 476 aa1.09□□□□□ -2.23
HMGB1P29-201ENST00000505659 PRAMEF6Q5VXH4 476 aa1.09□□□□□ -2.23
HMGB1P29-201ENST00000505659 FAM131AQ6UXB0 335 aa1.09□□□□□ -2.23
HMGB1P29-201ENST00000505659 MBOAT2Q6ZWT7 520 aa1.09□□□□□ -2.23
HMGB1P29-201ENST00000505659 CDR2LQ86X02 465 aaPredicted RBP1.09□□□□□ -2.23
HMGB1P29-201ENST00000505659 CBLN2Q8IUK8 224 aa1.09□□□□□ -2.23
HMGB1P29-201ENST00000505659 CMTM1Q8IZ96 169 aa1.09□□□□□ -2.23
HMGB1P29-201ENST00000505659 GTPBP8Q8N3Z3 284 aaPredicted RBP1.09□□□□□ -2.23
HMGB1P29-201ENST00000505659 GPATCH11Q8N954 259 aa1.09□□□□□ -2.23
HMGB1P29-201ENST00000505659 LRRC75AQ8NAA5 344 aa1.09□□□□□ -2.23
HMGB1P29-201ENST00000505659 TRIM44Q96DX7 344 aaPredicted RBP1.09□□□□□ -2.23
HMGB1P29-201ENST00000505659 ZNF442Q9H7R0 627 aa1.09□□□□□ -2.23
HMGB1P29-201ENST00000505659 TRIM45Q9H8W5 580 aaPredicted RBP1.09□□□□□ -2.23
HMGB1P29-201ENST00000505659 UXTQ9UBK9 157 aaPredicted RBP1.09□□□□□ -2.23
HMGB1P29-201ENST00000505659 ISY1Q9ULR0 285 aaKnown RBP1.09□□□□□ -2.23
HMGB1P29-201ENST00000505659 TENM1Q9UKZ4 2725 aa1.09□□□□□ -2.24
HMGB1P29-201ENST00000505659 FAM240BA0A1B0GVZ2 78 aa1.08□□□□□ -2.24
HMGB1P29-201ENST00000505659 SYCE1LA8MT33 242 aa1.08□□□□□ -2.24
HMGB1P29-201ENST00000505659 AIM2O14862 343 aa1.08□□□□□ -2.24
HMGB1P29-201ENST00000505659 CLDN11O75508 207 aa1.08□□□□□ -2.24
HMGB1P29-201ENST00000505659 SCELO95171 688 aa1.08□□□□□ -2.24
HMGB1P29-201ENST00000505659 FSTL3O95633 263 aa1.08□□□□□ -2.24
HMGB1P29-201ENST00000505659 IGLV2-8P01709 118 aa1.08□□□□□ -2.24
HMGB1P29-201ENST00000505659 CT45A6P0DMU7 189 aa1.08□□□□□ -2.24
HMGB1P29-201ENST00000505659 CT45A5P0DMU8 189 aa1.08□□□□□ -2.24
HMGB1P29-201ENST00000505659 CT45A7P0DMV0 189 aa1.08□□□□□ -2.24
HMGB1P29-201ENST00000505659 CTRB1P17538 263 aa1.08□□□□□ -2.24
HMGB1P29-201ENST00000505659 TNNI1P19237 187 aa1.08□□□□□ -2.24
HMGB1P29-201ENST00000505659 CSNK2A2P19784 350 aaPredicted RBP1.08□□□□□ -2.24
HMGB1P29-201ENST00000505659 PRKACBP22694 351 aa1.08□□□□□ -2.24
HMGB1P29-201ENST00000505659 ACLYP53396 1101 aa1.08□□□□□ -2.24
HMGB1P29-201ENST00000505659 TAS2R43P59537 309 aa1.08□□□□□ -2.24
HMGB1P29-201ENST00000505659 ACTR1AP61163 376 aa1.08□□□□□ -2.24
HMGB1P29-201ENST00000505659 RPL23AP62750 156 aaKnown RBP1.08□□□□□ -2.24
HMGB1P29-201ENST00000505659 SEMG2Q02383 582 aa1.08□□□□□ -2.24
HMGB1P29-201ENST00000505659 CT45A1Q5HYN5 189 aa1.08□□□□□ -2.24
HMGB1P29-201ENST00000505659 TMEM107Q6UX40 140 aa1.08□□□□□ -2.24
HMGB1P29-201ENST00000505659 CERS6Q6ZMG9 384 aa1.08□□□□□ -2.24
HMGB1P29-201ENST00000505659 RUFY3Q7L099 469 aa1.08□□□□□ -2.24
HMGB1P29-201ENST00000505659 NBPF5PQ86XG9 351 aaPredicted RBP1.08□□□□□ -2.24
HMGB1P29-201ENST00000505659 LY6G5BQ8NDX9 201 aa1.08□□□□□ -2.24
HMGB1P29-201ENST00000505659 OR1L1Q8NH94 360 aa1.08□□□□□ -2.24
HMGB1P29-201ENST00000505659 CT45A3Q8NHU0 189 aa1.08□□□□□ -2.24
HMGB1P29-201ENST00000505659 NT5C3BQ969T7 300 aa1.08□□□□□ -2.24
HMGB1P29-201ENST00000505659 NRBF2Q96F24 287 aa1.08□□□□□ -2.24
HMGB1P29-201ENST00000505659 LRRC40Q9H9A6 602 aa1.08□□□□□ -2.24
HMGB1P29-201ENST00000505659 PARP11Q9NR21 331 aa1.08□□□□□ -2.24
HMGB1P29-201ENST00000505659 ASF1BQ9NVP2 202 aa1.08□□□□□ -2.24
HMGB1P29-201ENST00000505659 SLC2A8Q9NY64 477 aa1.08□□□□□ -2.24
HMGB1P29-201ENST00000505659 RWDD2AQ9UIY3 292 aa1.08□□□□□ -2.24
HMGB1P29-201ENST00000505659 YARS2Q9Y2Z4 477 aaKnown RBP1.08□□□□□ -2.24
HMGB1P29-201ENST00000505659 SVILO95425 2214 aa1.08□□□□□ -2.24
HMGB1P29-201ENST00000505659 USP47Q96K76 1375 aa1.08□□□□□ -2.24
HMGB1P29-201ENST00000505659 COL5A3P25940 1745 aaPredicted RBP1.07□□□□□ -2.24
HMGB1P29-201ENST00000505659 IGLV10-54A0A075B6I4 117 aa1.07□□□□□ -2.24
HMGB1P29-201ENST00000505659 CXCL11O14625 94 aa1.07□□□□□ -2.24
HMGB1P29-201ENST00000505659 OVOL1O14753 267 aa1.07□□□□□ -2.24
HMGB1P29-201ENST00000505659 SCAMP2O15127 329 aaKnown RBP1.07□□□□□ -2.24
HMGB1P29-201ENST00000505659 GATBO75879 557 aaKnown RBP1.07□□□□□ -2.24
HMGB1P29-201ENST00000505659 AQP8O94778 261 aa1.07□□□□□ -2.24
HMGB1P29-201ENST00000505659 ILKQ13418 452 aa1.07□□□□□ -2.24
HMGB1P29-201ENST00000505659 TAF7Q15545 349 aaPredicted RBP1.07□□□□□ -2.24
HMGB1P29-201ENST00000505659 MRPL23Q16540 153 aaKnown RBP1.07□□□□□ -2.24
HMGB1P29-201ENST00000505659 CENPPQ6IPU0 288 aa1.07□□□□□ -2.24
HMGB1P29-201ENST00000505659 RTL4Q6ZR62 310 aa1.07□□□□□ -2.24
HMGB1P29-201ENST00000505659 MDP1Q86V88 176 aa1.07□□□□□ -2.24
HMGB1P29-201ENST00000505659 IQCKQ8N0W5 287 aa1.07□□□□□ -2.24
HMGB1P29-201ENST00000505659 SNX31Q8N9S9 440 aa1.07□□□□□ -2.24
HMGB1P29-201ENST00000505659 MUC7Q8TAX7 377 aa1.07□□□□□ -2.24
HMGB1P29-201ENST00000505659 RAB3IL1Q8TBN0 382 aa1.07□□□□□ -2.24
HMGB1P29-201ENST00000505659 CAPSLQ8WWF8 208 aa1.07□□□□□ -2.24
HMGB1P29-201ENST00000505659 ZBTB18Q99592 522 aa1.07□□□□□ -2.24
HMGB1P29-201ENST00000505659 GCOM2Q9BZD3 368 aaPredicted RBP1.07□□□□□ -2.24
HMGB1P29-201ENST00000505659 DCAF16Q9NXF7 216 aa1.07□□□□□ -2.24
HMGB1P29-201ENST00000505659 IL37Q9NZH6 218 aa1.07□□□□□ -2.24
HMGB1P29-201ENST00000505659 RAB23Q9ULC3 237 aa1.07□□□□□ -2.24
HMGB1P29-201ENST00000505659 KANK1Q14678 1352 aa1.07□□□□□ -2.24
HMGB1P29-201ENST00000505659 GABRPO00591 440 aa1.06□□□□□ -2.24
HMGB1P29-201ENST00000505659 TAAR5O14804 337 aa1.06□□□□□ -2.24
HMGB1P29-201ENST00000505659 TGM6O95932 706 aa1.06□□□□□ -2.24
HMGB1P29-201ENST00000505659 HSPD1P10809 573 aaKnown RBP1.06□□□□□ -2.24
HMGB1P29-201ENST00000505659 NCF2P19878 526 aaPredicted RBP1.06□□□□□ -2.24
HMGB1P29-201ENST00000505659 OR1E1P30953 314 aa1.06□□□□□ -2.24
HMGB1P29-201ENST00000505659 FUSP35637 526 aaKnown RBP eCLIP1.06□□□□□ -2.24
HMGB1P29-201ENST00000505659 ACOT2P49753 483 aa1.06□□□□□ -2.24
HMGB1P29-201ENST00000505659 BTN1A1Q13410 526 aa1.06□□□□□ -2.24
HMGB1P29-201ENST00000505659 ART3Q13508 389 aa1.06□□□□□ -2.24
HMGB1P29-201ENST00000505659 PSMD5Q16401 504 aa1.06□□□□□ -2.24
HMGB1P29-201ENST00000505659 SLC8B1Q6J4K2 584 aa1.06□□□□□ -2.24
HMGB1P29-201ENST00000505659 MORN3Q6PF18 240 aaPredicted RBP1.06□□□□□ -2.24
HMGB1P29-201ENST00000505659 OPN5Q6U736 354 aa1.06□□□□□ -2.24
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms