RNA–Protein interactions for RNA: ENST00000504948.5

ATP2C1-208, Transcript of ATPase secretory pathway Ca2+ transporting 1, humanhuman

TSL 1 (best) BASIC

Gene ATP2C1, Length 4,714 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2C1-208ENST00000504948 HIST1H2BAQ96A08 127 aa7.04□□□□□ -1.28
ATP2C1-208ENST00000504948 PLPPR2Q96GM1 343 aa7.04□□□□□ -1.28
ATP2C1-208ENST00000504948 TMEM59Q9BXS4 323 aa7.04□□□□□ -1.28
ATP2C1-208ENST00000504948 NMNAT2Q9BZQ4 307 aa7.04□□□□□ -1.28
ATP2C1-208ENST00000504948 ZCCHC4Q9H5U6 513 aa7.04□□□□□ -1.28
ATP2C1-208ENST00000504948 BCO1Q9HAY6 547 aa7.04□□□□□ -1.28
ATP2C1-208ENST00000504948 A4GALTQ9NPC4 353 aa7.04□□□□□ -1.28
ATP2C1-208ENST00000504948 FER1L5A0AVI2 2057 aa7.04□□□□□ -1.28
ATP2C1-208ENST00000504948 A0A1W2PP11 408 aa7.04□□□□□ -1.28
ATP2C1-208ENST00000504948 SNRPGP15A8MWD9 76 aa7.04□□□□□ -1.28
ATP2C1-208ENST00000504948 G3V3Y1 287 aa7.04□□□□□ -1.28
ATP2C1-208ENST00000504948 EFSO43281 561 aa7.04□□□□□ -1.28
ATP2C1-208ENST00000504948 LMX1BO60663 402 aa7.04□□□□□ -1.28
ATP2C1-208ENST00000504948 AQP8O94778 261 aa7.04□□□□□ -1.28
ATP2C1-208ENST00000504948 COL19A1Q14993 1142 aa7.04□□□□□ -1.28
ATP2C1-208ENST00000504948 TAF9Q16594 264 aa7.04□□□□□ -1.28
ATP2C1-208ENST00000504948 DECR1Q16698 335 aa7.04□□□□□ -1.28
ATP2C1-208ENST00000504948 PRAMEF8Q5VWM4 474 aa7.04□□□□□ -1.28
ATP2C1-208ENST00000504948 PRAMEF7Q5VXH5 474 aa7.04□□□□□ -1.28
ATP2C1-208ENST00000504948 DBX2Q6ZNG2 339 aa7.04□□□□□ -1.28
ATP2C1-208ENST00000504948 TAAR8Q969N4 342 aa7.04□□□□□ -1.28
ATP2C1-208ENST00000504948 SDF2Q99470 211 aa7.04□□□□□ -1.28
ATP2C1-208ENST00000504948 COA3Q9Y2R0 106 aaPredicted RBP7.04□□□□□ -1.28
ATP2C1-208ENST00000504948 SF3B6Q9Y3B4 125 aaKnown RBP7.04□□□□□ -1.28
ATP2C1-208ENST00000504948 NEUROG3Q9Y4Z2 214 aa7.04□□□□□ -1.28
ATP2C1-208ENST00000504948 ARHGAP21Q5T5U3 1957 aa7.04□□□□□ -1.28
ATP2C1-208ENST00000504948 TGIF2-C20orf24A0A0A6YYL0 155 aa7.04□□□□□ -1.28
ATP2C1-208ENST00000504948 PRAMEF27A3QJZ7 478 aa7.04□□□□□ -1.28
ATP2C1-208ENST00000504948 GFYI3L273 518 aa7.04□□□□□ -1.28
ATP2C1-208ENST00000504948 LDLRAD4O15165 306 aa7.04□□□□□ -1.28
ATP2C1-208ENST00000504948 GLSO94925 669 aaPredicted RBP7.04□□□□□ -1.28
ATP2C1-208ENST00000504948 IGLV3-25P01717 112 aa7.04□□□□□ -1.28
ATP2C1-208ENST00000504948 PGA4P0DJD7 388 aa7.04□□□□□ -1.28
ATP2C1-208ENST00000504948 PGA5P0DJD9 388 aa7.04□□□□□ -1.28
ATP2C1-208ENST00000504948 EMDP50402 254 aa7.04□□□□□ -1.28
ATP2C1-208ENST00000504948 GGTA1PQ4G0N0 100 aa7.04□□□□□ -1.28
ATP2C1-208ENST00000504948 ZNF793Q6ZN11 406 aa7.04□□□□□ -1.28
ATP2C1-208ENST00000504948 LIN28BQ6ZN17 250 aaKnown RBP eCLIP7.04□□□□□ -1.283e-7■■■□□ 18.5
ATP2C1-208ENST00000504948 DCXRQ7Z4W1 244 aa7.04□□□□□ -1.28
ATP2C1-208ENST00000504948 ZAR1Q86SH2 424 aa7.04□□□□□ -1.28
ATP2C1-208ENST00000504948 CMTM1Q8IZ96 169 aa7.04□□□□□ -1.28
ATP2C1-208ENST00000504948 TBC1D20Q96BZ9 403 aa7.04□□□□□ -1.28
ATP2C1-208ENST00000504948 RBMXL1Q96E39 390 aaKnown RBP7.04□□□□□ -1.28
ATP2C1-208ENST00000504948 RNF208Q9H0X6 261 aa7.04□□□□□ -1.28
ATP2C1-208ENST00000504948 ADGRL4Q9HBW9 690 aa7.04□□□□□ -1.28
ATP2C1-208ENST00000504948 MED29Q9NX70 200 aa7.04□□□□□ -1.28
ATP2C1-208ENST00000504948 PLA2G3Q9NZ20 509 aa7.04□□□□□ -1.28
ATP2C1-208ENST00000504948 COLEC10Q9Y6Z7 277 aa7.04□□□□□ -1.28
ATP2C1-208ENST00000504948 FREM3P0C091 2139 aa7.04□□□□□ -1.28
ATP2C1-208ENST00000504948 FNDC1Q4ZHG4 1894 aaPredicted RBP7.04□□□□□ -1.28
ATP2C1-208ENST00000504948 C17orf113A0A1B0GUU1 675 aa7.03□□□□□ -1.28
ATP2C1-208ENST00000504948 GP1BBP13224 206 aa7.03□□□□□ -1.28
ATP2C1-208ENST00000504948 DUSP1P28562 367 aa7.03□□□□□ -1.28
ATP2C1-208ENST00000504948 CX3CR1P49238 355 aa7.03□□□□□ -1.28
ATP2C1-208ENST00000504948 RAP1BP61224 184 aa7.03□□□□□ -1.28
ATP2C1-208ENST00000504948 MPPED2Q15777 294 aa7.03□□□□□ -1.28
ATP2C1-208ENST00000504948 FAM110CQ1W6H9 321 aa7.03□□□□□ -1.28
ATP2C1-208ENST00000504948 VHLLQ6RSH7 139 aa7.03□□□□□ -1.28
ATP2C1-208ENST00000504948 KIRREL2Q6UWL6 708 aa7.03□□□□□ -1.28
ATP2C1-208ENST00000504948 DEFB118Q96PH6 123 aa7.03□□□□□ -1.28
ATP2C1-208ENST00000504948 SLC25A21Q9BQT8 299 aaPredicted RBP7.03□□□□□ -1.28
ATP2C1-208ENST00000504948 NICN1Q9BSH3 213 aa7.03□□□□□ -1.28
ATP2C1-208ENST00000504948 RBM24Q9BX46 236 aaKnown RBP7.03□□□□□ -1.28
ATP2C1-208ENST00000504948 FAM234AQ9H0X4 552 aa7.03□□□□□ -1.28
ATP2C1-208ENST00000504948 PARD6AQ9NPB6 346 aa7.03□□□□□ -1.28
ATP2C1-208ENST00000504948 ST6GALNAC1Q9NSC7 600 aaPredicted RBP7.03□□□□□ -1.28
ATP2C1-208ENST00000504948 KLRF1Q9NZS2 232 aa7.03□□□□□ -1.28
ATP2C1-208ENST00000504948 PIPOXQ9P0Z9 390 aa7.03□□□□□ -1.28
ATP2C1-208ENST00000504948 CHRNA9Q9UGM1 479 aa7.03□□□□□ -1.28
ATP2C1-208ENST00000504948 CA14Q9ULX7 337 aa7.03□□□□□ -1.28
ATP2C1-208ENST00000504948 TMEM14AQ9Y6G1 99 aa7.03□□□□□ -1.28
ATP2C1-208ENST00000504948 LOC107986453A0A1B0GWG9 222 aa7.03□□□□□ -1.28
ATP2C1-208ENST00000504948 XKRY2A2RUG3 117 aa7.03□□□□□ -1.28
ATP2C1-208ENST00000504948 OTOL1A6NHN0 477 aaPredicted RBP7.03□□□□□ -1.28
ATP2C1-208ENST00000504948 HPNP05981 417 aa7.03□□□□□ -1.28
ATP2C1-208ENST00000504948 IAPPP10997 89 aa7.03□□□□□ -1.28
ATP2C1-208ENST00000504948 PNMTP11086 282 aa7.03□□□□□ -1.28
ATP2C1-208ENST00000504948 HOXD10P28358 340 aa7.03□□□□□ -1.28
ATP2C1-208ENST00000504948 ZNF93P35789 620 aaPredicted RBP7.03□□□□□ -1.28
ATP2C1-208ENST00000504948 RBP2P50120 134 aa7.03□□□□□ -1.28
ATP2C1-208ENST00000504948 TMEM33P57088 247 aa7.03□□□□□ -1.28
ATP2C1-208ENST00000504948 RUNX1Q01196 453 aa7.03□□□□□ -1.28
ATP2C1-208ENST00000504948 PABPC1L2AQ5JQF8 200 aa7.03□□□□□ -1.28
ATP2C1-208ENST00000504948 ZNF429Q86V71 674 aa7.03□□□□□ -1.28
ATP2C1-208ENST00000504948 NPAS4Q8IUM7 802 aa7.03□□□□□ -1.28
ATP2C1-208ENST00000504948 FBLIM1Q8WUP2 373 aa7.03□□□□□ -1.28
ATP2C1-208ENST00000504948 HGDQ93099 445 aa7.03□□□□□ -1.28
ATP2C1-208ENST00000504948 MISP3Q96FF7 219 aa7.03□□□□□ -1.28
ATP2C1-208ENST00000504948 RARRES2Q99969 163 aa7.03□□□□□ -1.28
ATP2C1-208ENST00000504948 C19orf12Q9NSK7 152 aa7.03□□□□□ -1.28
ATP2C1-208ENST00000504948 MTFP1Q9UDX5 166 aa7.03□□□□□ -1.28
ATP2C1-208ENST00000504948 ERRFI1Q9UJM3 462 aaPredicted RBP7.03□□□□□ -1.28
ATP2C1-208ENST00000504948 ANKRD20A5PA0PJZ0 165 aa7.03□□□□□ -1.28
ATP2C1-208ENST00000504948 A8MXK9 166 aa7.03□□□□□ -1.28
ATP2C1-208ENST00000504948 H7BYZ3 331 aa7.03□□□□□ -1.28
ATP2C1-208ENST00000504948 P2RX6O15547 441 aa7.03□□□□□ -1.28
ATP2C1-208ENST00000504948 GPRIN2O60269 458 aa7.03□□□□□ -1.28
ATP2C1-208ENST00000504948 UGDHO60701 494 aa7.03□□□□□ -1.28
ATP2C1-208ENST00000504948 CTAG2O75638 210 aa7.03□□□□□ -1.28
ATP2C1-208ENST00000504948 PMCHP20382 165 aa7.03□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms