RNA–Protein interactions for RNA: ENST00000504761.6

TCOF1-207, Transcript of treacle ribosome biogenesis factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TCOF1, Length 4,467 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-207ENST00000504761 TRAPPC2LQ9UL33 140 aa12.58□□□□□ -0.4
TCOF1-207ENST00000504761 A0A1B0GV50 99 aa12.57□□□□□ -0.4
TCOF1-207ENST00000504761 B4E171 279 aa12.57□□□□□ -0.4
TCOF1-207ENST00000504761 H3BUI4 141 aa12.57□□□□□ -0.4
TCOF1-207ENST00000504761 GABARAPH6UMI1 98 aa12.57□□□□□ -0.4
TCOF1-207ENST00000504761 SDCBPO00560 298 aaPredicted RBP12.57□□□□□ -0.4
TCOF1-207ENST00000504761 SEMA7AO75326 666 aa12.57□□□□□ -0.4
TCOF1-207ENST00000504761 SPDEFO95238 335 aa12.57□□□□□ -0.4
TCOF1-207ENST00000504761 BGLAPP02818 100 aa12.57□□□□□ -0.4
TCOF1-207ENST00000504761 SERPINE2P07093 398 aa12.57□□□□□ -0.4
TCOF1-207ENST00000504761 IL2RGP31785 369 aa12.57□□□□□ -0.4
TCOF1-207ENST00000504761 TSPAN7P41732 249 aa12.57□□□□□ -0.4
TCOF1-207ENST00000504761 LIMS1P48059 325 aa12.57□□□□□ -0.4
TCOF1-207ENST00000504761 MAMSTRQ6ZN01 415 aa12.57□□□□□ -0.4
TCOF1-207ENST00000504761 RFLNBQ8N5W9 214 aa12.57□□□□□ -0.4
TCOF1-207ENST00000504761 OR10AC1Q8NH08 325 aa12.57□□□□□ -0.4
TCOF1-207ENST00000504761 NELFAQ9H3P2 528 aa12.57□□□□□ -0.4
TCOF1-207ENST00000504761 PTTG3PQ9NZH4 202 aa12.57□□□□□ -0.4
TCOF1-207ENST00000504761 IL17BQ9UHF5 180 aa12.57□□□□□ -0.4
TCOF1-207ENST00000504761 PLXNA3P51805 1871 aa12.57□□□□□ -0.4
TCOF1-207ENST00000504761 HS3ST1O14792 307 aa12.57□□□□□ -0.4
TCOF1-207ENST00000504761 TK1P04183 234 aa12.57□□□□□ -0.4
TCOF1-207ENST00000504761 FTH1P19P0C7X4 201 aa12.57□□□□□ -0.4
TCOF1-207ENST00000504761 DCTDP32321 178 aa12.57□□□□□ -0.4
TCOF1-207ENST00000504761 CAV2P51636 162 aa12.57□□□□□ -0.4
TCOF1-207ENST00000504761 RAC3P60763 192 aa12.57□□□□□ -0.4
TCOF1-207ENST00000504761 RAB2AP61019 212 aa12.57□□□□□ -0.4
TCOF1-207ENST00000504761 OR1J2Q8NGS2 313 aa12.57□□□□□ -0.4
TCOF1-207ENST00000504761 RNF128Q8TEB7 428 aa12.57□□□□□ -0.4
TCOF1-207ENST00000504761 MED18Q9BUE0 208 aa12.57□□□□□ -0.4
TCOF1-207ENST00000504761 FLVCR2Q9UPI3 526 aa12.57□□□□□ -0.4
TCOF1-207ENST00000504761 THADAQ6YHU6 1953 aa12.57□□□□□ -0.4
TCOF1-207ENST00000504761 DSPPQ9NZW4 1301 aa12.57□□□□□ -0.4
TCOF1-207ENST00000504761 EPPINO95925 133 aa12.57□□□□□ -0.4
TCOF1-207ENST00000504761 RAC2P15153 192 aa12.57□□□□□ -0.4
TCOF1-207ENST00000504761 GNB3P16520 340 aa12.57□□□□□ -0.4
TCOF1-207ENST00000504761 HOXB9P17482 250 aaPredicted RBP12.57□□□□□ -0.4
TCOF1-207ENST00000504761 CNR1P21554 472 aa12.57□□□□□ -0.4
TCOF1-207ENST00000504761 GUCA2AQ02747 115 aa12.57□□□□□ -0.4
TCOF1-207ENST00000504761 CEBPEQ15744 281 aa12.57□□□□□ -0.4
TCOF1-207ENST00000504761 CDONQ4KMG0 1287 aa12.57□□□□□ -0.4
TCOF1-207ENST00000504761 HACD4Q5VWC8 232 aa12.57□□□□□ -0.4
TCOF1-207ENST00000504761 CCDC190Q86UF4 302 aa12.57□□□□□ -0.4
TCOF1-207ENST00000504761 RDH5Q92781 318 aa12.57□□□□□ -0.4
TCOF1-207ENST00000504761 FYTTD1Q96QD9 318 aaKnown RBP12.57□□□□□ -0.4
TCOF1-207ENST00000504761 MOB1AQ9H8S9 216 aa12.57□□□□□ -0.4
TCOF1-207ENST00000504761 ZNF286AQ9HBT8 521 aa12.57□□□□□ -0.4
TCOF1-207ENST00000504761 PET100P0DJ07 73 aa12.56□□□□□ -0.4
TCOF1-207ENST00000504761 CLDN20P56880 219 aa12.56□□□□□ -0.4
TCOF1-207ENST00000504761 DEFA5Q01523 94 aa12.56□□□□□ -0.4
TCOF1-207ENST00000504761 PDCD1Q15116 288 aa12.56□□□□□ -0.4
TCOF1-207ENST00000504761 ATP1A1-AS1Q5TC04 95 aa12.56□□□□□ -0.4
TCOF1-207ENST00000504761 SLC25A26Q70HW3 274 aa12.56□□□□□ -0.4
TCOF1-207ENST00000504761 ZNF695Q8IW36 515 aa12.56□□□□□ -0.4
TCOF1-207ENST00000504761 FAM181AQ8N9Y4 354 aa12.56□□□□□ -0.4
TCOF1-207ENST00000504761 OR2M2Q96R28 347 aa12.56□□□□□ -0.4
TCOF1-207ENST00000504761 MFFQ9GZY8 342 aa12.56□□□□□ -0.4
TCOF1-207ENST00000504761 TSC2P49815 1807 aa12.56□□□□□ -0.4
TCOF1-207ENST00000504761 CD96P40200 585 aa12.56□□□□□ -0.4
TCOF1-207ENST00000504761 UBE2MP61081 183 aaKnown RBP12.56□□□□□ -0.4
TCOF1-207ENST00000504761 LAIR2Q6ISS4 152 aa12.56□□□□□ -0.4
TCOF1-207ENST00000504761 TREM1Q9NP99 234 aa12.56□□□□□ -0.4
TCOF1-207ENST00000504761 WDR87Q6ZQQ6 2873 aa12.56□□□□□ -0.4
TCOF1-207ENST00000504761 FIGNL2A6NMB9 653 aa12.56□□□□□ -0.4
TCOF1-207ENST00000504761 NKX2-8O15522 239 aa12.56□□□□□ -0.4
TCOF1-207ENST00000504761 FABP7O15540 132 aa12.56□□□□□ -0.4
TCOF1-207ENST00000504761 RRAS2P62070 204 aaPredicted RBP12.56□□□□□ -0.4
TCOF1-207ENST00000504761 CLPPQ16740 277 aaPredicted RBP12.56□□□□□ -0.4
TCOF1-207ENST00000504761 PPP1R35Q8TAP8 253 aa12.56□□□□□ -0.4
TCOF1-207ENST00000504761 DCUN1D4Q92564 292 aa12.56□□□□□ -0.4
TCOF1-207ENST00000504761 NTMQ9P121 344 aa12.56□□□□□ -0.4
TCOF1-207ENST00000504761 PROCRQ9UNN8 238 aa12.56□□□□□ -0.4
TCOF1-207ENST00000504761 PCNX1Q96RV3 2341 aa12.56□□□□□ -0.4
TCOF1-207ENST00000504761 C21orf140B9A014 251 aa12.56□□□□□ -0.4
TCOF1-207ENST00000504761 PI3P19957 117 aa12.56□□□□□ -0.4
TCOF1-207ENST00000504761 TNFSF4P23510 183 aa12.56□□□□□ -0.4
TCOF1-207ENST00000504761 DUSP1P28562 367 aa12.56□□□□□ -0.4
TCOF1-207ENST00000504761 HTR2BP41595 481 aa12.56□□□□□ -0.4
TCOF1-207ENST00000504761 MLF1P58340 268 aa12.56□□□□□ -0.4
TCOF1-207ENST00000504761 FJX1Q86VR8 437 aa12.56□□□□□ -0.4
TCOF1-207ENST00000504761 GTPBP8Q8N3Z3 284 aaPredicted RBP12.56□□□□□ -0.4
TCOF1-207ENST00000504761 OR1F12Q8NHA8 337 aa12.56□□□□□ -0.4
TCOF1-207ENST00000504761 ASB10Q8WXI3 467 aa12.56□□□□□ -0.4
TCOF1-207ENST00000504761 ZNF385AQ96PM9 386 aaKnown RBP12.56□□□□□ -0.4
TCOF1-207ENST00000504761 SIRT4Q9Y6E7 314 aaPredicted RBP12.56□□□□□ -0.4
TCOF1-207ENST00000504761 TRAV1-2A0A0B4J238 106 aa12.55□□□□□ -0.4
TCOF1-207ENST00000504761 SPRY1O43609 319 aaPredicted RBP12.55□□□□□ -0.4
TCOF1-207ENST00000504761 IGKV3-11P04433 115 aa12.55□□□□□ -0.4
TCOF1-207ENST00000504761 CHRM2P08172 466 aa12.55□□□□□ -0.4
TCOF1-207ENST00000504761 ZNF806P0C7X5 589 aa12.55□□□□□ -0.4
TCOF1-207ENST00000504761 LIFP15018 202 aa12.55□□□□□ -0.4
TCOF1-207ENST00000504761 GABRB1P18505 474 aa12.55□□□□□ -0.4
TCOF1-207ENST00000504761 CFHR1Q03591 330 aa12.55□□□□□ -0.4
TCOF1-207ENST00000504761 KCNJ8Q15842 424 aa12.55□□□□□ -0.4
TCOF1-207ENST00000504761 KCNJ15Q99712 375 aa12.55□□□□□ -0.4
TCOF1-207ENST00000504761 C20orf85Q9H1P6 137 aa12.55□□□□□ -0.4
TCOF1-207ENST00000504761 TRGV8A0A0C4DH27 118 aa12.55□□□□□ -0.4
TCOF1-207ENST00000504761 ZNF891A8MT65 544 aaPredicted RBP12.55□□□□□ -0.4
TCOF1-207ENST00000504761 THY1P04216 161 aa12.55□□□□□ -0.4
TCOF1-207ENST00000504761 CD3DP04234 171 aa12.55□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms