RNA–Protein interactions for RNA: ENST00000498077.6

XRN1-214, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 5

Gene XRN1, Length 5,600 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-214ENST00000498077 HNMTP50135 292 aa1.22□□□□□ -2.21
XRN1-214ENST00000498077 WNT3AP56704 352 aa1.22□□□□□ -2.21
XRN1-214ENST00000498077 STXBP1P61764 594 aaKnown RBP1.22□□□□□ -2.21
XRN1-214ENST00000498077 GNGT1P63211 74 aa1.22□□□□□ -2.21
XRN1-214ENST00000498077 MAT1AQ00266 395 aaKnown RBP1.22□□□□□ -2.21
XRN1-214ENST00000498077 ATP6AP1Q15904 470 aa1.22□□□□□ -2.21
XRN1-214ENST00000498077 HLA-BQ31612 363 aa1.22□□□□□ -2.21
XRN1-214ENST00000498077 C10orf91Q5T1B1 145 aa1.22□□□□□ -2.21
XRN1-214ENST00000498077 C16orf54Q6UWD8 224 aa1.22□□□□□ -2.21
XRN1-214ENST00000498077 DNM1P46Q6ZS02 220 aa1.22□□□□□ -2.21
XRN1-214ENST00000498077 CERS3Q8IU89 383 aa1.22□□□□□ -2.21
XRN1-214ENST00000498077 KRTAP11-1Q8IUC1 163 aa1.22□□□□□ -2.21
XRN1-214ENST00000498077 ELMOD2Q8IZ81 293 aa1.22□□□□□ -2.21
XRN1-214ENST00000498077 CPXM2Q8N436 756 aa1.22□□□□□ -2.21
XRN1-214ENST00000498077 FGFRL1Q8N441 504 aa1.22□□□□□ -2.21
XRN1-214ENST00000498077 FBXO36Q8NEA4 188 aa1.22□□□□□ -2.21
XRN1-214ENST00000498077 OR2T4Q8NH00 348 aa1.22□□□□□ -2.21
XRN1-214ENST00000498077 APOBEC4Q8WW27 367 aaKnown RBP1.22□□□□□ -2.21
XRN1-214ENST00000498077 UCN3Q969E3 161 aa1.22□□□□□ -2.21
XRN1-214ENST00000498077 HIST1H2BAQ96A08 127 aa1.22□□□□□ -2.21
XRN1-214ENST00000498077 TAAR1Q96RJ0 339 aa1.22□□□□□ -2.21
XRN1-214ENST00000498077 TIMM17AQ99595 171 aa1.22□□□□□ -2.21
XRN1-214ENST00000498077 SLC6A7Q99884 636 aa1.22□□□□□ -2.21
XRN1-214ENST00000498077 BTBD2Q9BX70 525 aa1.22□□□□□ -2.21
XRN1-214ENST00000498077 C1QTNF3Q9BXJ4 246 aa1.22□□□□□ -2.21
XRN1-214ENST00000498077 MRPL9Q9BYD2 267 aaKnown RBP1.22□□□□□ -2.21
XRN1-214ENST00000498077 SPRY4Q9C004 299 aa1.22□□□□□ -2.21
XRN1-214ENST00000498077 KCNH7Q9NS40 1196 aa1.22□□□□□ -2.21
XRN1-214ENST00000498077 GPR27Q9NS67 375 aa1.22□□□□□ -2.21
XRN1-214ENST00000498077 TMEM30AQ9NV96 361 aa1.22□□□□□ -2.21
XRN1-214ENST00000498077 OR14J1Q9UGF5 321 aa1.22□□□□□ -2.21
XRN1-214ENST00000498077 MRPL42Q9Y6G3 142 aaKnown RBP1.22□□□□□ -2.21
XRN1-214ENST00000498077 UBE4BO95155 1302 aa1.22□□□□□ -2.21
XRN1-214ENST00000498077 MYO3BQ8WXR4 1341 aa1.22□□□□□ -2.21
XRN1-214ENST00000498077 NOTCH4Q99466 2003 aa1.22□□□□□ -2.21
XRN1-214ENST00000498077 KPNA7A9QM74 516 aa1.22□□□□□ -2.21
XRN1-214ENST00000498077 TMEM150CB9EJG8 249 aa1.22□□□□□ -2.21
XRN1-214ENST00000498077 E9PQ18 207 aa1.22□□□□□ -2.21
XRN1-214ENST00000498077 GABRDO14764 452 aa1.22□□□□□ -2.21
XRN1-214ENST00000498077 APOL1O14791 398 aa1.22□□□□□ -2.21
XRN1-214ENST00000498077 CBFA2T2O43439 604 aa1.22□□□□□ -2.21
XRN1-214ENST00000498077 KIAA0513O60268 411 aa1.22□□□□□ -2.21
XRN1-214ENST00000498077 PFDN1O60925 122 aa1.22□□□□□ -2.21
XRN1-214ENST00000498077 TCEA3O75764 348 aa1.22□□□□□ -2.21
XRN1-214ENST00000498077 CDK2AP2O75956 126 aa1.22□□□□□ -2.21
XRN1-214ENST00000498077 TPPPO94811 219 aa1.22□□□□□ -2.21
XRN1-214ENST00000498077 SEC24DO94855 1032 aaPredicted RBP1.22□□□□□ -2.21
XRN1-214ENST00000498077 LDLRP01130 860 aa1.22□□□□□ -2.21
XRN1-214ENST00000498077 CGAP01215 116 aa1.22□□□□□ -2.21
XRN1-214ENST00000498077 IFNA6P05013 189 aa1.22□□□□□ -2.21
XRN1-214ENST00000498077 CRYGDP07320 174 aa1.22□□□□□ -2.21
XRN1-214ENST00000498077 CYP2B6P20813 491 aa1.22□□□□□ -2.21
XRN1-214ENST00000498077 SYT1P21579 422 aa1.22□□□□□ -2.21
XRN1-214ENST00000498077 HTR2CP28335 458 aa1.22□□□□□ -2.21
XRN1-214ENST00000498077 NMBRP28336 390 aa1.22□□□□□ -2.21
XRN1-214ENST00000498077 STIP1P31948 543 aaKnown RBP1.22□□□□□ -2.21
XRN1-214ENST00000498077 GRK6P43250 576 aa1.22□□□□□ -2.21
XRN1-214ENST00000498077 TCL1AP56279 114 aa1.22□□□□□ -2.21
XRN1-214ENST00000498077 SNRPD3P62318 126 aaKnown RBP1.22□□□□□ -2.21
XRN1-214ENST00000498077 GRB2P62993 217 aaKnown RBP1.22□□□□□ -2.21
XRN1-214ENST00000498077 ZXDBP98169 803 aa1.22□□□□□ -2.21
XRN1-214ENST00000498077 SMAGPQ0VAQ4 97 aa1.22□□□□□ -2.21
XRN1-214ENST00000498077 GALNT1Q10472 559 aaPredicted RBP1.22□□□□□ -2.21
XRN1-214ENST00000498077 BIRC2Q13490 618 aa1.22□□□□□ -2.21
XRN1-214ENST00000498077 TIGITQ495A1 244 aa1.22□□□□□ -2.21
XRN1-214ENST00000498077 SLC35D3Q5M8T2 416 aa1.22□□□□□ -2.21
XRN1-214ENST00000498077 SPSB3Q6PJ21 355 aa1.22□□□□□ -2.21
XRN1-214ENST00000498077 DRAM2Q6UX65 266 aa1.22□□□□□ -2.21
XRN1-214ENST00000498077 NPSR1Q6W5P4 371 aa1.22□□□□□ -2.21
XRN1-214ENST00000498077 NIPA1Q7RTP0 329 aa1.22□□□□□ -2.21
XRN1-214ENST00000498077 PLPPR4Q7Z2D5 763 aa1.22□□□□□ -2.21
XRN1-214ENST00000498077 CXorf67Q86X51 503 aaPredicted RBP1.22□□□□□ -2.21
XRN1-214ENST00000498077 ZC3H3Q8IXZ2 948 aaKnown RBP1.22□□□□□ -2.21
XRN1-214ENST00000498077 KIRREL3Q8IZU9 778 aa1.22□□□□□ -2.21
XRN1-214ENST00000498077 BBS5Q8N3I7 341 aa1.22□□□□□ -2.21
XRN1-214ENST00000498077 SAMD12Q8N8I0 201 aa1.22□□□□□ -2.21
XRN1-214ENST00000498077 GPATCH11Q8N954 259 aa1.22□□□□□ -2.21
XRN1-214ENST00000498077 ZMIZ2Q8NF64 920 aa1.22□□□□□ -2.21
XRN1-214ENST00000498077 OR51G1Q8NGK1 321 aa1.22□□□□□ -2.21
XRN1-214ENST00000498077 OR5D14Q8NGL3 314 aa1.22□□□□□ -2.21
XRN1-214ENST00000498077 OR1L8Q8NGR8 309 aa1.22□□□□□ -2.21
XRN1-214ENST00000498077 CLEC4CQ8WTT0 213 aa1.22□□□□□ -2.21
XRN1-214ENST00000498077 SCAMP4Q969E2 229 aa1.22□□□□□ -2.21
XRN1-214ENST00000498077 NT5C3BQ969T7 300 aa1.22□□□□□ -2.21
XRN1-214ENST00000498077 ECSITQ9BQ95 431 aa1.22□□□□□ -2.21
XRN1-214ENST00000498077 TINF2Q9BSI4 451 aa1.22□□□□□ -2.21
XRN1-214ENST00000498077 SYT11Q9BT88 431 aa1.22□□□□□ -2.21
XRN1-214ENST00000498077 STN1Q9H668 368 aaKnown RBP1.22□□□□□ -2.21
XRN1-214ENST00000498077 RPF2Q9H7B2 306 aaKnown RBP1.22□□□□□ -2.21
XRN1-214ENST00000498077 KAT8Q9H7Z6 458 aaKnown RBP1.22□□□□□ -2.21
XRN1-214ENST00000498077 IL1RAPQ9NPH3 570 aa1.22□□□□□ -2.21
XRN1-214ENST00000498077 C20orf96Q9NUD7 363 aaPredicted RBP1.22□□□□□ -2.21
XRN1-214ENST00000498077 NDRG3Q9UGV2 375 aa1.22□□□□□ -2.21
XRN1-214ENST00000498077 PPP2R2CQ9Y2T4 447 aa1.22□□□□□ -2.21
XRN1-214ENST00000498077 ESPL1Q14674 2120 aa1.22□□□□□ -2.21
XRN1-214ENST00000498077 GPR98Q8WXG9 6306 aa1.22□□□□□ -2.21
XRN1-214ENST00000498077 SRRM2Q9UQ35 2752 aaKnown RBP1.22□□□□□ -2.21
XRN1-214ENST00000498077 BPTFQ12830 3046 aa1.22□□□□□ -2.21
XRN1-214ENST00000498077 TRBV6-6A0A0A6YYG2 114 aa1.21□□□□□ -2.21
XRN1-214ENST00000498077 IGLV5-39A0A0G2JS06 123 aa1.21□□□□□ -2.21
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms