RNA–Protein interactions for RNA: ENST00000497815.5

CUX1-210, Transcript of cut like homeobox 1, humanhuman

TSL 2

Gene CUX1, Length 947 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-210ENST00000497815 COMMD2Q86X83 199 aa10.21□□□□□ -0.77
CUX1-210ENST00000497815 KLBQ86Z14 1044 aa10.21□□□□□ -0.77
CUX1-210ENST00000497815 SYS1Q8N2H4 156 aa10.21□□□□□ -0.77
CUX1-210ENST00000497815 KLHL36Q8N4N3 616 aa10.21□□□□□ -0.77
CUX1-210ENST00000497815 OR8B12Q8NGG6 310 aa10.21□□□□□ -0.77
CUX1-210ENST00000497815 OR52H1Q8NGJ2 320 aa10.21□□□□□ -0.77
CUX1-210ENST00000497815 SPRYD4Q8WW59 207 aaPredicted RBP10.21□□□□□ -0.77
CUX1-210ENST00000497815 GATAD2BQ8WXI9 593 aa10.21□□□□□ -0.77
CUX1-210ENST00000497815 SGK3Q96BR1 496 aa10.21□□□□□ -0.77
CUX1-210ENST00000497815 PELI1Q96FA3 418 aa10.21□□□□□ -0.77
CUX1-210ENST00000497815 REEP6Q96HR9 211 aa10.21□□□□□ -0.77
CUX1-210ENST00000497815 MYCBPQ99417 103 aaPredicted RBP10.21□□□□□ -0.77
CUX1-210ENST00000497815 CCL19Q99731 98 aa10.21□□□□□ -0.77
CUX1-210ENST00000497815 DUSP21Q9H596 190 aa10.21□□□□□ -0.77
CUX1-210ENST00000497815 OR52A1Q9UKL2 312 aa10.21□□□□□ -0.77
CUX1-210ENST00000497815 SLC22A13Q9Y226 551 aa10.21□□□□□ -0.77
CUX1-210ENST00000497815 SNX5Q9Y5X3 404 aa10.21□□□□□ -0.77
CUX1-210ENST00000497815 E9PI62 339 aa10.2□□□□□ -0.78
CUX1-210ENST00000497815 H3BSH0 61 aa10.2□□□□□ -0.78
CUX1-210ENST00000497815 MYL12BO14950 172 aa10.2□□□□□ -0.78
CUX1-210ENST00000497815 XRCC2O43543 280 aa10.2□□□□□ -0.78
CUX1-210ENST00000497815 TIMM8AO60220 97 aaPredicted RBP10.2□□□□□ -0.78
CUX1-210ENST00000497815 CD8AP01732 235 aa10.2□□□□□ -0.78
CUX1-210ENST00000497815 MT-ND2P03891 347 aa10.2□□□□□ -0.78
CUX1-210ENST00000497815 MT-ND5P03915 603 aa10.2□□□□□ -0.78
CUX1-210ENST00000497815 HTR1AP08908 422 aa10.2□□□□□ -0.78
CUX1-210ENST00000497815 ZNF250P15622 560 aa10.2□□□□□ -0.78
CUX1-210ENST00000497815 ALDH3B1P43353 468 aa10.2□□□□□ -0.78
CUX1-210ENST00000497815 MMP16P51512 607 aa10.2□□□□□ -0.78
CUX1-210ENST00000497815 GBX2P52951 348 aaPredicted RBP10.2□□□□□ -0.78
CUX1-210ENST00000497815 SELENOVP59797 346 aa10.2□□□□□ -0.78
CUX1-210ENST00000497815 SNRPD2P62316 118 aaKnown RBP10.2□□□□□ -0.78
CUX1-210ENST00000497815 PSG7Q13046 419 aa10.2□□□□□ -0.78
CUX1-210ENST00000497815 NKPD1Q17RQ9 610 aa10.2□□□□□ -0.78
CUX1-210ENST00000497815 MST1LQ2TV78 715 aa10.2□□□□□ -0.78
CUX1-210ENST00000497815 TMEM255AQ5JRV8 349 aa10.2□□□□□ -0.78
CUX1-210ENST00000497815 WDR38Q5JTN6 314 aa10.2□□□□□ -0.78
CUX1-210ENST00000497815 MBNL2Q5VZF2 373 aaKnown RBP10.2□□□□□ -0.78
CUX1-210ENST00000497815 OR2T2Q6IF00 324 aa10.2□□□□□ -0.78
CUX1-210ENST00000497815 PGAP1Q75T13 922 aa10.2□□□□□ -0.78
CUX1-210ENST00000497815 CATSPERDQ86XM0 798 aa10.2□□□□□ -0.78
CUX1-210ENST00000497815 C1orf174Q8IYL3 243 aa10.2□□□□□ -0.78
CUX1-210ENST00000497815 OR5AS1Q8N127 324 aa10.2□□□□□ -0.78
CUX1-210ENST00000497815 PRSS35Q8N3Z0 413 aa10.2□□□□□ -0.78
CUX1-210ENST00000497815 BHLHE23Q8NDY6 225 aa10.2□□□□□ -0.78
CUX1-210ENST00000497815 LURAP1Q96LR2 239 aa10.2□□□□□ -0.78
CUX1-210ENST00000497815 TRAF4Q9BUZ4 470 aaPredicted RBP10.2□□□□□ -0.78
CUX1-210ENST00000497815 G6PC2Q9NQR9 355 aa10.2□□□□□ -0.78
CUX1-210ENST00000497815 CBLN4Q9NTU7 201 aa10.2□□□□□ -0.78
CUX1-210ENST00000497815 TAAR3PQ9P1P4 343 aa10.2□□□□□ -0.78
CUX1-210ENST00000497815 BAHCC1Q9P281 2608 aa10.2□□□□□ -0.78
CUX1-210ENST00000497815 NUFIP1Q9UHK0 495 aaKnown RBP10.2□□□□□ -0.78
CUX1-210ENST00000497815 ERGIC3Q9Y282 383 aa10.2□□□□□ -0.78
CUX1-210ENST00000497815 PLEKHA6Q9Y2H5 1048 aa10.2□□□□□ -0.78
CUX1-210ENST00000497815 CAB39Q9Y376 341 aaPredicted RBP10.2□□□□□ -0.78
CUX1-210ENST00000497815 HECTD1Q9ULT8 2610 aa10.2□□□□□ -0.78
CUX1-210ENST00000497815 PTPN13Q12923 2485 aa10.19□□□□□ -0.78
CUX1-210ENST00000497815 TMEM129A0AVI4 362 aa10.19□□□□□ -0.78
CUX1-210ENST00000497815 GGT3PA6NGU5 568 aa10.19□□□□□ -0.78
CUX1-210ENST00000497815 ACOD1A6NK06 481 aa10.19□□□□□ -0.78
CUX1-210ENST00000497815 B9A039 149 aa10.19□□□□□ -0.78
CUX1-210ENST00000497815 P2RY10O00398 339 aa10.19□□□□□ -0.78
CUX1-210ENST00000497815 TTRP02766 147 aa10.19□□□□□ -0.78
CUX1-210ENST00000497815 RAC2P15153 192 aa10.19□□□□□ -0.78
CUX1-210ENST00000497815 TUBG1P23258 451 aa10.19□□□□□ -0.78
CUX1-210ENST00000497815 CDKN1AP38936 164 aa10.19□□□□□ -0.78
CUX1-210ENST00000497815 KIR3DL2P43630 455 aa10.19□□□□□ -0.78
CUX1-210ENST00000497815 GTF2A1P52655 376 aaPredicted RBP10.19□□□□□ -0.78
CUX1-210ENST00000497815 CDH15P55291 814 aa10.19□□□□□ -0.78
CUX1-210ENST00000497815 NANOS3P60323 173 aaKnown RBP10.19□□□□□ -0.78
CUX1-210ENST00000497815 EFNB3Q15768 340 aa10.19□□□□□ -0.78
CUX1-210ENST00000497815 SWI5Q1ZZU3 235 aa10.19□□□□□ -0.78
CUX1-210ENST00000497815 PAMR1Q6UXH9 720 aa10.19□□□□□ -0.78
CUX1-210ENST00000497815 FBXW12Q6X9E4 464 aa10.19□□□□□ -0.78
CUX1-210ENST00000497815 ELMOD2Q8IZ81 293 aa10.19□□□□□ -0.78
CUX1-210ENST00000497815 OR52N1Q8NH53 320 aa10.19□□□□□ -0.78
CUX1-210ENST00000497815 OR51E1Q8TCB6 317 aa10.19□□□□□ -0.78
CUX1-210ENST00000497815 GTF3AQ92664 365 aaKnown RBP10.19□□□□□ -0.78
CUX1-210ENST00000497815 RNF166Q96A37 237 aaPredicted RBP10.19□□□□□ -0.78
CUX1-210ENST00000497815 HAVCR1Q96D42 359 aa10.19□□□□□ -0.78
CUX1-210ENST00000497815 FAM71F1Q96KD3 344 aaPredicted RBP10.19□□□□□ -0.78
CUX1-210ENST00000497815 SOX7Q9BT81 388 aa10.19□□□□□ -0.78
CUX1-210ENST00000497815 CACNG6Q9BXT2 260 aa10.19□□□□□ -0.78
CUX1-210ENST00000497815 MOB1AQ9H8S9 216 aa10.19□□□□□ -0.78
CUX1-210ENST00000497815 DYNLRB1Q9NP97 96 aa10.19□□□□□ -0.78
CUX1-210ENST00000497815 TUBG2Q9NRH3 451 aa10.19□□□□□ -0.78
CUX1-210ENST00000497815 FRRS1LQ9P0K9 344 aa10.19□□□□□ -0.78
CUX1-210ENST00000497815 PURGQ9UJV8 347 aaKnown RBP10.19□□□□□ -0.78
CUX1-210ENST00000497815 LRCH1Q9Y2L9 728 aa10.19□□□□□ -0.78
CUX1-210ENST00000497815 PKDREJQ9NTG1 2253 aa10.19□□□□□ -0.78
CUX1-210ENST00000497815 HRNRQ86YZ3 2850 aaPredicted RBP10.18□□□□□ -0.78
CUX1-210ENST00000497815 IGLV3-9A0A075B6K5 115 aa10.18□□□□□ -0.78
CUX1-210ENST00000497815 PLSCR5A0PG75 271 aa10.18□□□□□ -0.78
CUX1-210ENST00000497815 H3BSA7 217 aa10.18□□□□□ -0.78
CUX1-210ENST00000497815 IGHV3-13P01766 116 aa10.18□□□□□ -0.78
CUX1-210ENST00000497815 RAF1P04049 648 aa10.18□□□□□ -0.78
CUX1-210ENST00000497815 NAT2P11245 290 aa10.18□□□□□ -0.78
CUX1-210ENST00000497815 MAP2K4P45985 399 aa10.18□□□□□ -0.78
CUX1-210ENST00000497815 GABARAPL2P60520 117 aa10.18□□□□□ -0.78
CUX1-210ENST00000497815 XAF1Q6GPH4 301 aa10.18□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms