RNA–Protein interactions for RNA: ENST00000497597.5

TRAPPC12-223, Transcript of trafficking protein particle complex 12, humanhuman

TSL 2

Gene TRAPPC12, Length 3,401 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC12-223ENST00000497597 BORCS7-ASMTA0A0B4J1R7 106 aa9.52□□□□□ -0.89
TRAPPC12-223ENST00000497597 CDK3Q00526 305 aa9.52□□□□□ -0.89
TRAPPC12-223ENST00000497597 ZNF239Q16600 458 aaKnown RBP9.52□□□□□ -0.89
TRAPPC12-223ENST00000497597 NKAIN1Q4KMZ8 207 aa9.52□□□□□ -0.89
TRAPPC12-223ENST00000497597 PRSS54Q6PEW0 395 aa9.52□□□□□ -0.89
TRAPPC12-223ENST00000497597 ZFP62Q8NB50 900 aaPredicted RBP9.52□□□□□ -0.89
TRAPPC12-223ENST00000497597 OR4C3Q8NH37 302 aa9.52□□□□□ -0.89
TRAPPC12-223ENST00000497597 PHOSPHO2Q8TCD6 241 aa9.52□□□□□ -0.89
TRAPPC12-223ENST00000497597 RERGQ96A58 199 aaPredicted RBP9.52□□□□□ -0.89
TRAPPC12-223ENST00000497597 PACRGQ96M98 296 aaPredicted RBP9.52□□□□□ -0.89
TRAPPC12-223ENST00000497597 ST6GALNAC1Q9NSC7 600 aaPredicted RBP9.52□□□□□ -0.89
TRAPPC12-223ENST00000497597 LOC107986453A0A1B0GWG9 222 aa9.52□□□□□ -0.89
TRAPPC12-223ENST00000497597 IFITM10A6NMD0 228 aa9.52□□□□□ -0.89
TRAPPC12-223ENST00000497597 MLF2Q15773 248 aaPredicted RBP9.52□□□□□ -0.89
TRAPPC12-223ENST00000497597 PLXDC2Q6UX71 529 aa9.52□□□□□ -0.89
TRAPPC12-223ENST00000497597 SFTPA1Q8IWL2 248 aa9.52□□□□□ -0.89
TRAPPC12-223ENST00000497597 SAT2Q96F10 170 aaPredicted RBP9.52□□□□□ -0.89
TRAPPC12-223ENST00000497597 ZNF558Q96NG5 402 aa9.52□□□□□ -0.89
TRAPPC12-223ENST00000497597 NICN1Q9BSH3 213 aa9.52□□□□□ -0.89
TRAPPC12-223ENST00000497597 ZNF426Q9BUY5 554 aa9.52□□□□□ -0.89
TRAPPC12-223ENST00000497597 HHLA2Q9UM44 414 aa9.52□□□□□ -0.89
TRAPPC12-223ENST00000497597 C14orf166Q9Y224 244 aaKnown RBP9.52□□□□□ -0.89
TRAPPC12-223ENST00000497597 HIF3AQ9Y2N7 669 aa9.52□□□□□ -0.89
TRAPPC12-223ENST00000497597 TMEM14AQ9Y6G1 99 aa9.52□□□□□ -0.89
TRAPPC12-223ENST00000497597 MDC1Q14676 2089 aaKnown RBP9.52□□□□□ -0.89
TRAPPC12-223ENST00000497597 DOCK9Q9BZ29 2069 aa9.52□□□□□ -0.89
TRAPPC12-223ENST00000497597 TMEM269A0A1B0GVZ9 245 aa9.52□□□□□ -0.89
TRAPPC12-223ENST00000497597 RDH16O75452 317 aa9.52□□□□□ -0.89
TRAPPC12-223ENST00000497597 CRTAPO75718 401 aaPredicted RBP9.52□□□□□ -0.89
TRAPPC12-223ENST00000497597 SELPP16109 830 aa9.52□□□□□ -0.89
TRAPPC12-223ENST00000497597 RPL18Q07020 188 aaKnown RBP9.52□□□□□ -0.89
TRAPPC12-223ENST00000497597 SGCGQ13326 291 aa9.52□□□□□ -0.89
TRAPPC12-223ENST00000497597 FAM78AQ5JUQ0 283 aa9.52□□□□□ -0.89
TRAPPC12-223ENST00000497597 TCEAL6Q6IPX3 200 aa9.52□□□□□ -0.89
TRAPPC12-223ENST00000497597 SLC18B1Q6NT16 456 aa9.52□□□□□ -0.89
TRAPPC12-223ENST00000497597 ANGPTL5Q86XS5 388 aa9.52□□□□□ -0.89
TRAPPC12-223ENST00000497597 SP7Q8TDD2 431 aaPredicted RBP9.52□□□□□ -0.89
TRAPPC12-223ENST00000497597 SOCS4Q8WXH5 440 aa9.52□□□□□ -0.89
TRAPPC12-223ENST00000497597 SOX7Q9BT81 388 aa9.52□□□□□ -0.89
TRAPPC12-223ENST00000497597 TPSD1Q9BZJ3 242 aa9.52□□□□□ -0.89
TRAPPC12-223ENST00000497597 MBNL1Q9NR56 388 aaKnown RBP9.52□□□□□ -0.89
TRAPPC12-223ENST00000497597 GAB2Q9UQC2 676 aa9.52□□□□□ -0.89
TRAPPC12-223ENST00000497597 KCNIP3Q9Y2W7 256 aa9.52□□□□□ -0.89
TRAPPC12-223ENST00000497597 ZBTB32Q9Y2Y4 487 aaPredicted RBP9.52□□□□□ -0.89
TRAPPC12-223ENST00000497597 FLVCR1Q9Y5Y0 555 aa9.52□□□□□ -0.89
TRAPPC12-223ENST00000497597 A0A1W2PP11 408 aa9.51□□□□□ -0.89
TRAPPC12-223ENST00000497597 CDC14CA4D256 554 aa9.51□□□□□ -0.89
TRAPPC12-223ENST00000497597 OR5H15A6NDH6 313 aa9.51□□□□□ -0.89
TRAPPC12-223ENST00000497597 OR5H1A6NKK0 313 aa9.51□□□□□ -0.89
TRAPPC12-223ENST00000497597 HRKO00198 91 aa9.51□□□□□ -0.89
TRAPPC12-223ENST00000497597 SCGNO76038 276 aa9.51□□□□□ -0.89
TRAPPC12-223ENST00000497597 RPLP2P05387 115 aaKnown RBP9.51□□□□□ -0.89
TRAPPC12-223ENST00000497597 ZNF735P0CB33 412 aa9.51□□□□□ -0.89
TRAPPC12-223ENST00000497597 EDN3P14138 238 aa9.51□□□□□ -0.89
TRAPPC12-223ENST00000497597 HOXA5P20719 270 aa9.51□□□□□ -0.89
TRAPPC12-223ENST00000497597 CX3CR1P49238 355 aa9.51□□□□□ -0.89
TRAPPC12-223ENST00000497597 ARRB1P49407 418 aaPredicted RBP9.51□□□□□ -0.89
TRAPPC12-223ENST00000497597 RPS23P62266 143 aaKnown RBP9.51□□□□□ -0.89
TRAPPC12-223ENST00000497597 ARHGAP19Q14CB8 494 aa9.51□□□□□ -0.89
TRAPPC12-223ENST00000497597 ANKRD55Q3KP44 614 aa9.51□□□□□ -0.89
TRAPPC12-223ENST00000497597 LINC01590Q5TEZ4 76 aa9.51□□□□□ -0.89
TRAPPC12-223ENST00000497597 C1QL3Q5VWW1 255 aa9.51□□□□□ -0.89
TRAPPC12-223ENST00000497597 FAM71F1Q96KD3 344 aaPredicted RBP9.51□□□□□ -0.89
TRAPPC12-223ENST00000497597 SH3BGRL3Q9H299 93 aa9.51□□□□□ -0.89
TRAPPC12-223ENST00000497597 ZNF106Q9H2Y7 1883 aaKnown RBP9.51□□□□□ -0.89
TRAPPC12-223ENST00000497597 HOXA2O43364 376 aa9.51□□□□□ -0.89
TRAPPC12-223ENST00000497597 IGHV2-5P01817 119 aa9.51□□□□□ -0.89
TRAPPC12-223ENST00000497597 SOD3P08294 240 aa9.51□□□□□ -0.89
TRAPPC12-223ENST00000497597 CCR2P41597 374 aa9.51□□□□□ -0.89
TRAPPC12-223ENST00000497597 ACTR1BP42025 376 aa9.51□□□□□ -0.89
TRAPPC12-223ENST00000497597 RPL29P47914 159 aaKnown RBP9.51□□□□□ -0.89
TRAPPC12-223ENST00000497597 PRPS1P60891 318 aa9.51□□□□□ -0.89
TRAPPC12-223ENST00000497597 METRNLQ641Q3 311 aa9.51□□□□□ -0.89
TRAPPC12-223ENST00000497597 PSRC1Q6PGN9 363 aaPredicted RBP9.51□□□□□ -0.89
TRAPPC12-223ENST00000497597 MEX3BQ6ZN04 569 aaKnown RBP9.51□□□□□ -0.89
TRAPPC12-223ENST00000497597 ZNF705AQ6ZN79 300 aaPredicted RBP9.51□□□□□ -0.89
TRAPPC12-223ENST00000497597 TMEM217Q8N7C4 229 aa9.51□□□□□ -0.89
TRAPPC12-223ENST00000497597 TMEM52Q8NDY8 209 aa9.51□□□□□ -0.89
TRAPPC12-223ENST00000497597 SLC2A8Q9NY64 477 aa9.51□□□□□ -0.89
TRAPPC12-223ENST00000497597 THSD7BQ9C0I4 1608 aa9.5□□□□□ -0.89
TRAPPC12-223ENST00000497597 PPIHO43447 177 aaKnown RBP9.5□□□□□ -0.89
TRAPPC12-223ENST00000497597 CSTBP04080 98 aaKnown RBP9.5□□□□□ -0.89
TRAPPC12-223ENST00000497597 COX5BP10606 129 aa9.5□□□□□ -0.89
TRAPPC12-223ENST00000497597 PKIAP61925 76 aa9.5□□□□□ -0.89
TRAPPC12-223ENST00000497597 HGFACQ04756 655 aa9.5□□□□□ -0.89
TRAPPC12-223ENST00000497597 HMGN3Q15651 99 aa9.5□□□□□ -0.89
TRAPPC12-223ENST00000497597 CHRFAM7AQ494W8 412 aa9.5□□□□□ -0.89
TRAPPC12-223ENST00000497597 TMEM128Q5BJH2 165 aa9.5□□□□□ -0.89
TRAPPC12-223ENST00000497597 KCTD18Q6PI47 426 aaPredicted RBP9.5□□□□□ -0.89
TRAPPC12-223ENST00000497597 NRSN1Q8IZ57 195 aa9.5□□□□□ -0.89
TRAPPC12-223ENST00000497597 RCBTB1Q8NDN9 531 aa9.5□□□□□ -0.89
TRAPPC12-223ENST00000497597 TERB2Q8NHR7 220 aa9.5□□□□□ -0.89
TRAPPC12-223ENST00000497597 ERGIC1Q969X5 290 aa9.5□□□□□ -0.89
TRAPPC12-223ENST00000497597 C2orf50Q96LR7 162 aa9.5□□□□□ -0.89
TRAPPC12-223ENST00000497597 C19orf43Q9BQ61 176 aa9.5□□□□□ -0.89
TRAPPC12-223ENST00000497597 SLC35B3Q9H1N7 401 aa9.5□□□□□ -0.89
TRAPPC12-223ENST00000497597 C1orf198Q9H425 327 aa9.5□□□□□ -0.89
TRAPPC12-223ENST00000497597 PTGES2Q9H7Z7 377 aa9.5□□□□□ -0.89
TRAPPC12-223ENST00000497597 C19orf12Q9NSK7 152 aa9.5□□□□□ -0.89
TRAPPC12-223ENST00000497597 SERTAD3Q9UJW9 196 aa9.5□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms