RNA–Protein interactions for RNA: ENST00000496711.5

GARNL3-220, Transcript of GTPase activating Rap/RanGAP domain like 3, humanhuman

TSL 1 (best)

Gene GARNL3, Length 1,859 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GARNL3-220ENST00000496711 ZNF319Q9P2F9 582 aa11.51□□□□□ -0.57
GARNL3-220ENST00000496711 FBLN5Q9UBX5 448 aa11.51□□□□□ -0.57
GARNL3-220ENST00000496711 FOXD3Q9UJU5 478 aaPredicted RBP11.51□□□□□ -0.57
GARNL3-220ENST00000496711 KLK13Q9UKR3 277 aa11.51□□□□□ -0.57
GARNL3-220ENST00000496711 LNP1A1A4G5 178 aa11.51□□□□□ -0.57
GARNL3-220ENST00000496711 M0R296 226 aa11.51□□□□□ -0.57
GARNL3-220ENST00000496711 RAB27BO00194 218 aa11.51□□□□□ -0.57
GARNL3-220ENST00000496711 SMAD9O15198 467 aaKnown RBP11.51□□□□□ -0.57
GARNL3-220ENST00000496711 DHHO43323 396 aa11.51□□□□□ -0.57
GARNL3-220ENST00000496711 TPOP07202 933 aa11.51□□□□□ -0.57
GARNL3-220ENST00000496711 MELTFP08582 738 aa11.51□□□□□ -0.57
GARNL3-220ENST00000496711 JMJD7P0C870 316 aa11.51□□□□□ -0.57
GARNL3-220ENST00000496711 SP9P0CG40 484 aa11.51□□□□□ -0.57
GARNL3-220ENST00000496711 ANOS1P23352 680 aa11.51□□□□□ -0.57
GARNL3-220ENST00000496711 ZNF528Q3MIS6 628 aa11.51□□□□□ -0.57
GARNL3-220ENST00000496711 C6orf183Q5T699 404 aa11.51□□□□□ -0.57
GARNL3-220ENST00000496711 ZNF584Q8IVC4 421 aa11.51□□□□□ -0.57
GARNL3-220ENST00000496711 OR5AS1Q8N127 324 aa11.51□□□□□ -0.57
GARNL3-220ENST00000496711 GALNT16Q8N428 558 aa11.51□□□□□ -0.57
GARNL3-220ENST00000496711 OR52B4Q8NGK2 314 aa11.51□□□□□ -0.57
GARNL3-220ENST00000496711 OR14L1PQ8NHC6 308 aa11.51□□□□□ -0.57
GARNL3-220ENST00000496711 SOX7Q9BT81 388 aa11.51□□□□□ -0.57
GARNL3-220ENST00000496711 SF3B5Q9BWJ5 86 aaKnown RBP11.51□□□□□ -0.57
GARNL3-220ENST00000496711 ULBP2Q9BZM5 246 aa11.51□□□□□ -0.57
GARNL3-220ENST00000496711 CHIAQ9BZP6 476 aa11.51□□□□□ -0.57
GARNL3-220ENST00000496711 EXO5Q9H790 373 aa11.51□□□□□ -0.57
GARNL3-220ENST00000496711 ZMAT3Q9HA38 289 aaKnown RBP11.51□□□□□ -0.57
GARNL3-220ENST00000496711 UPB1Q9UBR1 384 aa11.51□□□□□ -0.57
GARNL3-220ENST00000496711 FARSAQ9Y285 508 aaKnown RBP11.51□□□□□ -0.57
GARNL3-220ENST00000496711 COL6A3P12111 3177 aa11.5□□□□□ -0.57
GARNL3-220ENST00000496711 LRRC3CA6NJW4 275 aa11.5□□□□□ -0.57
GARNL3-220ENST00000496711 ZNF736B4DX44 427 aaPredicted RBP11.5□□□□□ -0.57
GARNL3-220ENST00000496711 CD74P04233 296 aa11.5□□□□□ -0.57
GARNL3-220ENST00000496711 AMY2AP04746 511 aa11.5□□□□□ -0.57
GARNL3-220ENST00000496711 ITGB2P05107 769 aa11.5□□□□□ -0.57
GARNL3-220ENST00000496711 SERPINA7P05543 415 aa11.5□□□□□ -0.57
GARNL3-220ENST00000496711 ENPP1P22413 925 aa11.5□□□□□ -0.57
GARNL3-220ENST00000496711 ZNF84P51523 738 aa11.5□□□□□ -0.57
GARNL3-220ENST00000496711 RAC3P60763 192 aa11.5□□□□□ -0.57
GARNL3-220ENST00000496711 RAP2BP61225 183 aa11.5□□□□□ -0.57
GARNL3-220ENST00000496711 HYAL4Q2M3T9 481 aa11.5□□□□□ -0.57
GARNL3-220ENST00000496711 GFOD2Q3B7J2 385 aa11.5□□□□□ -0.57
GARNL3-220ENST00000496711 ZNF260Q3ZCT1 412 aa11.5□□□□□ -0.57
GARNL3-220ENST00000496711 ACER2Q5QJU3 275 aa11.5□□□□□ -0.57
GARNL3-220ENST00000496711 YRDCQ86U90 279 aaKnown RBP11.5□□□□□ -0.57
GARNL3-220ENST00000496711 FAM109AQ8N4B1 249 aa11.5□□□□□ -0.57
GARNL3-220ENST00000496711 ZIC4Q8N9L1 334 aa11.5□□□□□ -0.57
GARNL3-220ENST00000496711 PGAM5Q96HS1 289 aa11.5□□□□□ -0.57
GARNL3-220ENST00000496711 NUDT16L1Q9BRJ7 211 aaKnown RBP11.5□□□□□ -0.57
GARNL3-220ENST00000496711 P4HTMQ9NXG6 502 aa11.5□□□□□ -0.57
GARNL3-220ENST00000496711 EIF3KQ9UBQ5 218 aaKnown RBP11.5□□□□□ -0.57
GARNL3-220ENST00000496711 ELF5Q9UKW6 265 aaPredicted RBP11.5□□□□□ -0.57
GARNL3-220ENST00000496711 ANKRD34BA5PLL1 514 aa11.49□□□□□ -0.57
GARNL3-220ENST00000496711 WIPF3A6NGB9 483 aa11.49□□□□□ -0.57
GARNL3-220ENST00000496711 TMEM14DPA8MWL7 114 aa11.49□□□□□ -0.57
GARNL3-220ENST00000496711 M0QYG6 137 aa11.49□□□□□ -0.57
GARNL3-220ENST00000496711 TOXO94900 526 aa11.49□□□□□ -0.57
GARNL3-220ENST00000496711 GSK3AP49840 483 aa11.49□□□□□ -0.57
GARNL3-220ENST00000496711 ZNF81P51508 661 aa11.49□□□□□ -0.57
GARNL3-220ENST00000496711 PER3P56645 1201 aa11.49□□□□□ -0.57
GARNL3-220ENST00000496711 HIST1H3AP68431 136 aa11.49□□□□□ -0.57
GARNL3-220ENST00000496711 HIST2H3PS2Q5TEC6 136 aa11.49□□□□□ -0.57
GARNL3-220ENST00000496711 IDO2Q6ZQW0 420 aa11.49□□□□□ -0.57
GARNL3-220ENST00000496711 HIST2H3AQ71DI3 136 aa11.49□□□□□ -0.57
GARNL3-220ENST00000496711 CHMP1BQ7LBR1 199 aa11.49□□□□□ -0.57
GARNL3-220ENST00000496711 OR2W3Q7Z3T1 314 aa11.49□□□□□ -0.57
GARNL3-220ENST00000496711 GGNQ86UU5 652 aa11.49□□□□□ -0.57
GARNL3-220ENST00000496711 FJX1Q86VR8 437 aa11.49□□□□□ -0.57
GARNL3-220ENST00000496711 ANGPTL5Q86XS5 388 aa11.49□□□□□ -0.57
GARNL3-220ENST00000496711 C20orf196Q8IYI0 205 aa11.49□□□□□ -0.57
GARNL3-220ENST00000496711 ZNF101Q8IZC7 436 aa11.49□□□□□ -0.57
GARNL3-220ENST00000496711 OR8H1Q8NGG4 311 aa11.49□□□□□ -0.57
GARNL3-220ENST00000496711 RADILQ96JH8 1075 aa11.49□□□□□ -0.57
GARNL3-220ENST00000496711 SLC25A21Q9BQT8 299 aaPredicted RBP11.49□□□□□ -0.57
GARNL3-220ENST00000496711 RBM24Q9BX46 236 aaKnown RBP11.49□□□□□ -0.57
GARNL3-220ENST00000496711 TINAGL1Q9GZM7 467 aaPredicted RBP11.49□□□□□ -0.57
GARNL3-220ENST00000496711 PIPOXQ9P0Z9 390 aa11.49□□□□□ -0.57
GARNL3-220ENST00000496711 MRPS28Q9Y2Q9 187 aaKnown RBP11.49□□□□□ -0.57
GARNL3-220ENST00000496711 VPS13AQ96RL7 3174 aa11.49□□□□□ -0.57
GARNL3-220ENST00000496711 OR2A4O95047 310 aa11.49□□□□□ -0.57
GARNL3-220ENST00000496711 ALX3O95076 343 aa11.49□□□□□ -0.57
GARNL3-220ENST00000496711 IGLV3-1P01715 115 aa11.49□□□□□ -0.57
GARNL3-220ENST00000496711 HCKP08631 526 aa11.49□□□□□ -0.57
GARNL3-220ENST00000496711 SLC6A9P48067 706 aa11.49□□□□□ -0.57
GARNL3-220ENST00000496711 TSPAN5P62079 268 aa11.49□□□□□ -0.57
GARNL3-220ENST00000496711 EIF3IQ13347 325 aaKnown RBP11.49□□□□□ -0.57
GARNL3-220ENST00000496711 MEF2DQ14814 521 aa11.49□□□□□ -0.57
GARNL3-220ENST00000496711 LGALSLQ3ZCW2 172 aaPredicted RBP11.49□□□□□ -0.57
GARNL3-220ENST00000496711 ZBTB37Q5TC79 503 aa11.49□□□□□ -0.57
GARNL3-220ENST00000496711 TRAPPC6BQ86SZ2 158 aa11.49□□□□□ -0.57
GARNL3-220ENST00000496711 LRRC18Q8N456 261 aa11.49□□□□□ -0.57
GARNL3-220ENST00000496711 FTMTQ8N4E7 242 aa11.49□□□□□ -0.57
GARNL3-220ENST00000496711 CHST4Q8NCG5 386 aa11.49□□□□□ -0.57
GARNL3-220ENST00000496711 OR14K1Q8NGZ2 314 aa11.49□□□□□ -0.57
GARNL3-220ENST00000496711 CCDC107Q8WV48 283 aa11.49□□□□□ -0.57
GARNL3-220ENST00000496711 CMBLQ96DG6 245 aa11.49□□□□□ -0.57
GARNL3-220ENST00000496711 LIN37Q96GY3 246 aaPredicted RBP11.49□□□□□ -0.57
GARNL3-220ENST00000496711 SFXN2Q96NB2 322 aa11.49□□□□□ -0.57
GARNL3-220ENST00000496711 OR2A7Q96R45 310 aa11.49□□□□□ -0.57
GARNL3-220ENST00000496711 A0A0U1RQV5 110 aa11.48□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 54.2 ms